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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:2262800..2263638+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_005305-T1 ID=KJC3_005305-T1|Name=KJC3_005305-T1|organism=Aspergillus niger KJC3|type=mRNA|length=839bp|location=Sequence derived from alignment at ch4:2262800..2263638+ (Aspergillus niger KJC3)
ATTCACCAGCATCGCTTTCACTCATGATTCACTTCACCCATCTCAACCTA
GTAGCAGTCAAATCACTTCACTAATCTCTCAGAAGTGAGGTGCCTCTACC
AAACTCACTCGGTCCCTTTCCCTTACTTTACCTCGCCACCATCACTCACT
GTCACTGTCACTCAACCACTTTGTTATCGATCGACATCATTGCCGCAATT
CCGTCCAAATACCTCACGCACCAACCACTATCTTAACCACCACGACGAAC
CCACAACCAGCACCATGTTCTGTCTTCGGAGGTAAGCAAATCCATCCTCA
CCTCCAAACCACTACTTCAAACCCCCCCAGAGTACTGATTAACGAATGAA
TGAATCTAGCTGGCTCCCCCTCCTCTTCATCCCAACAAACGCCTCTCCCC
TCTTCATCATCTCCTTCGTCACCCTAACCTACATCCTCCACCGACCCTGC
ATCTACTGCTCCGCGCTCCTCCTCATCCTCTTCATCTCCTCCTGCCACTG
GTCCGACAAATGTTTCTTCGATCTCCGCGGTGACTGGTTCTCTCCGCGCT
ACTCCACCACCGCATTAGACACCACCACAAGTACATCATCATCCGTCAAC
GAAACCCTCGCCAGCTACGTCTTCGAAACCGTCAACAGCACCACCAAGGC
CCTTGCCGGGGCCGTCGTCGAAGAAGCGCAACGCAGACTCGCCCTGAATG
GAACATTAGCCGCGTCGACAACGACTTCCGCGCAAGATGAGTGGACGGGT
ATTGGGCTTGAGTGGTTGAGGAGTCTTTTGGGGAGGAGGGAGTGGACGTT
GCCGTGTGTGGATGTTAAGGTGAGATTGTAAAATAGGGG back to topCoding sequence (CDS) from alignment at ch4:2262800..2263638+ >KJC3_005305-T1 ID=KJC3_005305-T1|Name=KJC3_005305-T1|organism=Aspergillus niger KJC3|type=CDS|length=978bp|location=Sequence derived from alignment at ch4:2262800..2263638+ (Aspergillus niger KJC3)
ATGTTCTGTCTTCGGAGCTGGCTCCCCCTCCTCTTCATCCCAACAAACGC
CTCTCCCCTCTTCATCATCTCCTTCGTCACCCTAACCTACATCCTCCACC
GACCCTGCATCTACTGCTCCGCGCTCCTCCTCATCCTCTTCATCTCCTCC
TGCCACTGGTCCGACAAATGTTTCTTCGATCTCCGCGGTGACTGGTTCTC
TCCGCGCTACTCCACCACCGCATTAGACACCACCACAAGTACATCATCAT
CCGTCAACGAAACCCTCGCCAGCTACGTCTTCGAAACCGTCAACAGCACC
ACCAAGGCCCTTGCCGGGGCCGTCGTCGAAGAAGCGCAACGCAGACTCGC
CCTGAATGGAACATTAGCCGCGTCGACAACGACTTCCGCGCAAGATGAGT
GGACGGGTATTGGGCTTGAGTGGTTGAGGAGTCTTTTGGGGAGGAGGGAG
TGGACGTTGCCGTGTGTGGATGTTAAGGTGAGATTGTAAATGTTCTGTCT
TCGGAGCTGGCTCCCCCTCCTCTTCATCCCAACAAACGCCTCTCCCCTCT
TCATCATCTCCTTCGTCACCCTAACCTACATCCTCCACCGACCCTGCATC
TACTGCTCCGCGCTCCTCCTCATCCTCTTCATCTCCTCCTGCCACTGGTC
CGACAAATGTTTCTTCGATCTCCGCGGTGACTGGTTCTCTCCGCGCTACT
CCACCACCGCATTAGACACCACCACAAGTACATCATCATCCGTCAACGAA
ACCCTCGCCAGCTACGTCTTCGAAACCGTCAACAGCACCACCAAGGCCCT
TGCCGGGGCCGTCGTCGAAGAAGCGCAACGCAGACTCGCCCTGAATGGAA
CATTAGCCGCGTCGACAACGACTTCCGCGCAAGATGAGTGGACGGGTATT
GGGCTTGAGTGGTTGAGGAGTCTTTTGGGGAGGAGGGAGTGGACGTTGCC
GTGTGTGGATGTTAAGGTGAGATTGTAA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_005305-T1.utr5p1 | KJC3_005305-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_005305-T1.utr3p1 | KJC3_005305-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR009598 |
| DBxref | PFAM:PF06726 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch4 | supercontig | ch4:2262800..2263638 + |
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