You are here

Home

KJC3_005316-T1, KJC3_005316-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_005316-T1
Unique NameKJC3_005316-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch4:2295886..2297041+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_005316-T1 ID=KJC3_005316-T1|Name=KJC3_005316-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1156bp|location=Sequence derived from alignment at ch4:2295886..2297041+ (Aspergillus niger KJC3)
ATGGCTCCATCGAATAAGCAGAAGCGAGGCCATCCCAAATCGAAACCCTC
GTCATCCAAGCGTCGCAAGACCGCAAAGGCAGGCCCTGAAGCACCCGACC
AGTCTGAGGAAGCTGACCCTCAATCGACCATCCCATCCCAAGCTCAGCCT
GCGAGCCCGGTACACTCATCGTCCAGCGACCTGTCGTACAAGATTTATGA
TGGCCTCGACCGCTATGGCGATCTTGAACCGTCCGGTATCATAGTCGATG
TCGAGCTACCAGCTGATATCAAAGAGTATGCAGATATCACGGTCTTGAGT
ATCAGTAGGCTCCGAAATGCTGAGCAGGGCGGAATAGAATCGTTTCAGGA
GCAGATAGCTGAAGTCAACAGCAGACGCAGCATGCACCATGAATGGGTGG
GGCTTATACACAAGGCCATTCTTCGCCTGAAACTAGAGAACAGCATATCA
TTCACAACTGTGGAAGACAAAGGTATGTGACACAGAATATCCTAACGTTT
GCATATTGTTAGCACCAGATCTGACCTCCCAAAAAGATTGGCACGCAGAC
ATACAGCCCAAACTGCTGCAGAGTCCCGAATACATATCTCGACCAGACAT
TTGTGTTGGTCTGCGTGAGCTTCAGATACGAGAAGTTCTGTATCACAAAT
CTGACGATGCAGTTGCAGAGGAGTTCTGGAATAAGCTGAAAATAGACGGT
GGAGTGATCAGTGACCCATTTGCGAAGCCGCAGTATCTGCGATTTCCATT
CTTCATTGTGGAAGTCCGGTCCGACACTGCTGGAGATGACCTACGCCAAG
CCCAGAATCGAGCTGCAGTTGGTGCTTCTCGCGCGCTTTGGATGCTCCAG
ATGCTCTCTGCAAATAGGCGAGAGGCGAAAAGCGCTAAGCCCAAGAAGGG
CTTTGATATCACCAATCTTCCGGTATTTTCACTTGTCTCGGATGGCGCAA
CATTCCAACTCTGGGTCCATTATCGGAATTTAATTCCGGGCGAGAGCGTC
GACAAGATGGAATACTGTTCTGCACATCTGAAATCATGGCATGCAACAAG
TGAAAAAGCCTGCTCCAAAATCCTGAAGAGTATTTACGCCATTCTAAGAT
GGGGAGTTGGTGAATATAAGAGTAAGGTGGCCGAGGCGCTCAAGTCATTT
GTGTGA
back to top

Coding sequence (CDS) from alignment at ch4:2295886..2297041+

>KJC3_005316-T1 ID=KJC3_005316-T1|Name=KJC3_005316-T1|organism=Aspergillus niger KJC3|type=CDS|length=2184bp|location=Sequence derived from alignment at ch4:2295886..2297041+ (Aspergillus niger KJC3)
ATGGCTCCATCGAATAAGCAGAAGCGAGGCCATCCCAAATCGAAACCCTC
GTCATCCAAGCGTCGCAAGACCGCAAAGGCAGGCCCTGAAGCACCCGACC
AGTCTGAGGAAGCTGACCCTCAATCGACCATCCCATCCCAAGCTCAGCCT
GCGAGCCCGGTACACTCATCGTCCAGCGACCTGTCGTACAAGATTTATGA
TGGCCTCGACCGCTATGGCGATCTTGAACCGTCCGGTATCATAGTCGATG
TCGAGCTACCAGCTGATATCAAAGAGTATGCAGATATCACGGTCTTGAGT
ATCAGTAGGCTCCGAAATGCTGAGCAGGGCGGAATAGAATCGTTTCAGGA
GCAGATAGCTGAAGTCAACAGCAGACGCAGCATGCACCATGAATGGGTGG
GGCTTATACACAAGGCCATTCTTCGCCTGAAACTAGAGAACAGCATATCA
TTCACAACTGTGGAAGACAAAGATTGGCACGCAGACATACAGCCCAAACT
GCTGCAGAGTCCCGAATACATATCTCGACCAGACATTTGTGTTGGTCTGC
GTGAGCTTCAGATACGAGAAGTTCTGTATCACAAATCTGACGATGCAGTT
GCAGAGGAGTTCTGGAATAAGCTGAAAATAGACGGTGGAGTGATCAGTGA
CCCATTTGCGAAGCCGCAGTATCTGCGATTTCCATTCTTCATTGTGGAAG
TCCGGTCCGACACTGCTGGAGATGACCTACGCCAAGCCCAGAATCGAGCT
GCAGTTGGTGCTTCTCGCGCGCTTTGGATGCTCCAGATGCTCTCTGCAAA
TAGGCGAGAGGCGAAAAGCGCTAAGCCCAAGAAGGGCTTTGATATCACCA
ATCTTCCGGTATTTTCACTTGTCTCGGATGGCGCAACATTCCAACTCTGG
GTCCATTATCGGAATTTAATTCCGGGCGAGAGCGTCGACAAGATGGAATA
CTGTTCTGCACATCTGAAATCATGGCATGCAACAAGTGAAAAAGCCTGCT
CCAAAATCCTGAAGAGTATTTACGCCATTCTAAGATGGGGAGTTGGTGAA
TATAAGAGTAAGGTGGCCGAGGCGCTCAAGTCATTTGTGTGAATGGCTCC
ATCGAATAAGCAGAAGCGAGGCCATCCCAAATCGAAACCCTCGTCATCCA
AGCGTCGCAAGACCGCAAAGGCAGGCCCTGAAGCACCCGACCAGTCTGAG
GAAGCTGACCCTCAATCGACCATCCCATCCCAAGCTCAGCCTGCGAGCCC
GGTACACTCATCGTCCAGCGACCTGTCGTACAAGATTTATGATGGCCTCG
ACCGCTATGGCGATCTTGAACCGTCCGGTATCATAGTCGATGTCGAGCTA
CCAGCTGATATCAAAGAGTATGCAGATATCACGGTCTTGAGTATCAGTAG
GCTCCGAAATGCTGAGCAGGGCGGAATAGAATCGTTTCAGGAGCAGATAG
CTGAAGTCAACAGCAGACGCAGCATGCACCATGAATGGGTGGGGCTTATA
CACAAGGCCATTCTTCGCCTGAAACTAGAGAACAGCATATCATTCACAAC
TGTGGAAGACAAAGATTGGCACGCAGACATACAGCCCAAACTGCTGCAGA
GTCCCGAATACATATCTCGACCAGACATTTGTGTTGGTCTGCGTGAGCTT
CAGATACGAGAAGTTCTGTATCACAAATCTGACGATGCAGTTGCAGAGGA
GTTCTGGAATAAGCTGAAAATAGACGGTGGAGTGATCAGTGACCCATTTG
CGAAGCCGCAGTATCTGCGATTTCCATTCTTCATTGTGGAAGTCCGGTCC
GACACTGCTGGAGATGACCTACGCCAAGCCCAGAATCGAGCTGCAGTTGG
TGCTTCTCGCGCGCTTTGGATGCTCCAGATGCTCTCTGCAAATAGGCGAG
AGGCGAAAAGCGCTAAGCCCAAGAAGGGCTTTGATATCACCAATCTTCCG
GTATTTTCACTTGTCTCGGATGGCGCAACATTCCAACTCTGGGTCCATTA
TCGGAATTTAATTCCGGGCGAGAGCGTCGACAAGATGGAATACTGTTCTG
CACATCTGAAATCATGGCATGCAACAAGTGAAAAAGCCTGCTCCAAAATC
CTGAAGAGTATTTACGCCATTCTAAGATGGGGAGTTGGTGAATATAAGAG
TAAGGTGGCCGAGGCGCTCAAGTCATTTGTGTGA
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_005316KJC3_005316Aspergillus niger KJC3gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005316-T1.exon1KJC3_005316-T1.exon1Aspergillus niger KJC3exon
KJC3_005316-T1.exon2KJC3_005316-T1.exon2Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005316-T1.cdsKJC3_005316-T1.cdsAspergillus niger KJC3CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005316-T1KJC3_005316-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch4supercontigch4:2295886..2297041 +
Powered by Drupal