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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:2311208..2313505- Legend: CDSpolypeptideexon Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_005322-T1 ID=KJC3_005322-T1|Name=KJC3_005322-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2298bp|location=Sequence derived from alignment at ch4:2311208..2313505- (Aspergillus niger KJC3)
ATGCGTTTCGGCAAGACTCTTCGCAACTCTATATATGCCCCCTGGGCGGG
CAAATACATCGACTACAATAAGCTCAAGGTCTTGCTCCGAGAGCATGATG
TCACTGGTGATGGCAGTGACTCTGAAAGCAACCCATGGACCGAGCAGGAT
GAAGAAGCCTTCGTGCAAGAGCTCATTAACGTCCAGCTCGATAAGGTCAA
TGCTTTTCAGATGGAAACCCTCCAGCAGTTGCGAGAGCGTACCACTACCT
GCGAAGCCCGCTTGCGCCCGTTGACGACCTCGCCCGAGGACGGGGCCCCT
ACCGTGGTGGATGAAGAGGAGAAGAAGCGTGTCGCTTCCGATGTCCTGCA
GGAATTGGACAATATCACAAAGGAGGTAATAGAGCTCGAGAAGTACAGTC
GCATCAACTTCACCGGCTTCCTCAAAGCTGCAAAGAAGCATGATCGTAAG
CGTGGTACTCGCTACCGTGTCAAGCCTCTGCTCCAAGTGCGTCTCTCGCA
ACTCCCCTTCAACTCGGAAGACTACTCCCCTTTGGTGCGTCGGTTGTCCG
TGATGTACTCCTTCGCCCGTGAGATCCTCAGCCAAGGTATAATCGAGGCC
AAGGACCCCGCCGAGCCTCGTGTCGGTCAGGATGTCTACTCCTCGTTCAA
GTTTTGGGTTCATGCAGACAACATTCTGGAGGTGAAGACCTACATCCTCC
GACAACTGCCCGTCCTTATCTACAACCCTGGCACCTCCAGGGATCTCAAC
ACCGTTCCCGATGACCCCACGATTACCTCCCTCTACTTCGACAACCCGCA
ATTCGATCTTTACACTCAGAAGGTAGCCCGTGCCCCTGAAGCGGGCTCGC
TGCGGCTGCGCTGGACCGGCAACCTACGGGATAAGCCCGCCATCTTCCTG
GAGAAGAAGGTGGTCACAGATGATGATCGCAGCCGAGAGGTCAAGGTGCA
GCTCAAGCAGAAGCACGTCAAGGAATTCCTGGACGGAGAGTACCGTTTCG
ACAAGAAGGTGCATCGCATGGAAAACATGGGCAATGGAGAGTCCGAGCAA
GCGGAGGCTTTCAAGAAGGATGTCGATGAGCTCCAATCCTTCATCAAGGA
GCACAACCTGCAGCCCATGCTCCGCGCCAACTACACCCGCACGGCCTTCC
AGATTCCTGGAGATGATCGAATCCGTATTTCCCTCGATACCAACCTGGCA
CTCATCCGGGAAGACGCGCTGGACGAGCTGCGCCCGTGCCGTGACGCAGA
TGAATGGCACCGGAGGGATATTGACGATGCTGGCATGGAATATCCCTTCC
AGTCCATCAGAACCGGCGAAATTGCTCGTTTCCCTCATGGCTTGCTGGAG
ATTAAAATCAGAGGGGATGTGGCTCGTAGCGCTGAATGGGTCAAGGACCT
GATGGTGTCTCATCTCGTGAAGGAAGCCCCACGGTTCTCCAAATTCGTCC
ATGGCGTTGCCCAATTGTTCGAAGACTATGTCAACAGCTTCCCCTTCTGG
CTCGGCGAGTTGGAAAGCGACATCAGGCGGGACCCTGAGACGGCTTTCCA
CGAAGAACAGGAGCGACTGGCGAAGCGTGCCGAAGACGATATGGCTGTCG
GAAGCTTCCTGGGAGGCAAGACACCGTCAACTCGGCACATTGTCGGGTCC
CCTGTCCAGATGTTCACCGAGACAGGGCCGTCACGTCGCCGCCAATCCTC
CCAGATTGTACAGCCGATTCCTCGTCCATCTGCCCCGACAATGTCACAAC
CGACCCCTGAACGTCAGGAGCCCGCCCAAGAGTTCGCCGCAGAGGCGGAA
CAGCCAGTCACCATGAAGCGCCTGGCCTCTCTCTTCCCCTCCTTTACCAT
CTCCCGTCAAAATCGCGCACCGGCAGACAACGTTGTTCTGCCCCCTGGTG
TCCGGGAGCCCGGCACCTGGATCAAGGACTCGGGCCCGGTCCGTGTCGAG
ACCAAGGTCTGGCTCGCCAACCAGCGTACCTTTATCAAGTGGCTCCACAT
TAGCATCCTACTTTCTTCGCTATCTCTGGGTTTGTACAACGCGGCGGGCA
AACACAACGACATTGCTCGCGCTCTGTCCATTGTCTACACCTGCTTCGCC
ATCTTCGCTGCCGCCTGGGGATGGTACATGCACGAGAAGCGGGCCCGTCT
CATCCGTCAGCGGAGCGGAAAGGATCTGGACAACATGTTTGGCCCGATAG
TGGTCTGCGTGGGGTTGGCCGTTGCCTTGGTATTGAACTTTGCCTTTAAG
GTAGGCTTATATCGCACCCTCATCTCTTTATTGAACAGTCCAAACTAA back to topCoding sequence (CDS) from alignment at ch4:2311208..2313505- >KJC3_005322-T1 ID=KJC3_005322-T1|Name=KJC3_005322-T1|organism=Aspergillus niger KJC3|type=CDS|length=2298bp|location=Sequence derived from alignment at ch4:2311208..2313505- (Aspergillus niger KJC3)
ATGCGTTTCGGCAAGACTCTTCGCAACTCTATATATGCCCCCTGGGCGGG
CAAATACATCGACTACAATAAGCTCAAGGTCTTGCTCCGAGAGCATGATG
TCACTGGTGATGGCAGTGACTCTGAAAGCAACCCATGGACCGAGCAGGAT
GAAGAAGCCTTCGTGCAAGAGCTCATTAACGTCCAGCTCGATAAGGTCAA
TGCTTTTCAGATGGAAACCCTCCAGCAGTTGCGAGAGCGTACCACTACCT
GCGAAGCCCGCTTGCGCCCGTTGACGACCTCGCCCGAGGACGGGGCCCCT
ACCGTGGTGGATGAAGAGGAGAAGAAGCGTGTCGCTTCCGATGTCCTGCA
GGAATTGGACAATATCACAAAGGAGGTAATAGAGCTCGAGAAGTACAGTC
GCATCAACTTCACCGGCTTCCTCAAAGCTGCAAAGAAGCATGATCGTAAG
CGTGGTACTCGCTACCGTGTCAAGCCTCTGCTCCAAGTGCGTCTCTCGCA
ACTCCCCTTCAACTCGGAAGACTACTCCCCTTTGGTGCGTCGGTTGTCCG
TGATGTACTCCTTCGCCCGTGAGATCCTCAGCCAAGGTATAATCGAGGCC
AAGGACCCCGCCGAGCCTCGTGTCGGTCAGGATGTCTACTCCTCGTTCAA
GTTTTGGGTTCATGCAGACAACATTCTGGAGGTGAAGACCTACATCCTCC
GACAACTGCCCGTCCTTATCTACAACCCTGGCACCTCCAGGGATCTCAAC
ACCGTTCCCGATGACCCCACGATTACCTCCCTCTACTTCGACAACCCGCA
ATTCGATCTTTACACTCAGAAGGTAGCCCGTGCCCCTGAAGCGGGCTCGC
TGCGGCTGCGCTGGACCGGCAACCTACGGGATAAGCCCGCCATCTTCCTG
GAGAAGAAGGTGGTCACAGATGATGATCGCAGCCGAGAGGTCAAGGTGCA
GCTCAAGCAGAAGCACGTCAAGGAATTCCTGGACGGAGAGTACCGTTTCG
ACAAGAAGGTGCATCGCATGGAAAACATGGGCAATGGAGAGTCCGAGCAA
GCGGAGGCTTTCAAGAAGGATGTCGATGAGCTCCAATCCTTCATCAAGGA
GCACAACCTGCAGCCCATGCTCCGCGCCAACTACACCCGCACGGCCTTCC
AGATTCCTGGAGATGATCGAATCCGTATTTCCCTCGATACCAACCTGGCA
CTCATCCGGGAAGACGCGCTGGACGAGCTGCGCCCGTGCCGTGACGCAGA
TGAATGGCACCGGAGGGATATTGACGATGCTGGCATGGAATATCCCTTCC
AGTCCATCAGAACCGGCGAAATTGCTCGTTTCCCTCATGGCTTGCTGGAG
ATTAAAATCAGAGGGGATGTGGCTCGTAGCGCTGAATGGGTCAAGGACCT
GATGGTGTCTCATCTCGTGAAGGAAGCCCCACGGTTCTCCAAATTCGTCC
ATGGCGTTGCCCAATTGTTCGAAGACTATGTCAACAGCTTCCCCTTCTGG
CTCGGCGAGTTGGAAAGCGACATCAGGCGGGACCCTGAGACGGCTTTCCA
CGAAGAACAGGAGCGACTGGCGAAGCGTGCCGAAGACGATATGGCTGTCG
GAAGCTTCCTGGGAGGCAAGACACCGTCAACTCGGCACATTGTCGGGTCC
CCTGTCCAGATGTTCACCGAGACAGGGCCGTCACGTCGCCGCCAATCCTC
CCAGATTGTACAGCCGATTCCTCGTCCATCTGCCCCGACAATGTCACAAC
CGACCCCTGAACGTCAGGAGCCCGCCCAAGAGTTCGCCGCAGAGGCGGAA
CAGCCAGTCACCATGAAGCGCCTGGCCTCTCTCTTCCCCTCCTTTACCAT
CTCCCGTCAAAATCGCGCACCGGCAGACAACGTTGTTCTGCCCCCTGGTG
TCCGGGAGCCCGGCACCTGGATCAAGGACTCGGGCCCGGTCCGTGTCGAG
ACCAAGGTCTGGCTCGCCAACCAGCGTACCTTTATCAAGTGGCTCCACAT
TAGCATCCTACTTTCTTCGCTATCTCTGGGTTTGTACAACGCGGCGGGCA
AACACAACGACATTGCTCGCGCTCTGTCCATTGTCTACACCTGCTTCGCC
ATCTTCGCTGCCGCCTGGGGATGGTACATGCACGAGAAGCGGGCCCGTCT
CATCCGTCAGCGGAGCGGAAAGGATCTGGACAACATGTTTGGCCCGATAG
TGGTCTGCGTGGGGTTGGCCGTTGCCTTGGTATTGAACTTTGCCTTTAAG
GTAGGCTTATATCGCACCCTCATCTCTTTATTGAACAGTCCAAACTAA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR004331 |
| DBxref | InterPro:IPR003807 |
| DBxref | InterPro:IPR018966 |
| DBxref | PFAM:PF09359 |
| DBxref | PFAM:PF02656 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch4 | supercontig | ch4:2311208..2313505 - |
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