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KJC3_005326-T1, KJC3_005326-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_005326-T1
Unique NameKJC3_005326-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch4:2319680..2321538+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_005326-T1 ID=KJC3_005326-T1|Name=KJC3_005326-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1859bp|location=Sequence derived from alignment at ch4:2319680..2321538+ (Aspergillus niger KJC3)
CGGGGGAGGAGAAGATGCCATCGTGTTGTTGTTCTTGTTGTTGTACTTCG
ACTTTCCGTTCTTATGCTGCTGAACGCTGCTATCCTTCGTTCCTTTTCTG
TTCCTCATGCTTAATTAGATCTCTTTTCGTTCGCTCTCTTATTCCGGGCC
TTTTCTTTCCTACTCGTCTTGACCTCCTAGTGTCCCCCTGTACCTCGCCA
TCTCACCACCATGGCGGTTGCCGCAGACCAGCGGAAGAAGATCCTCAAGG
TCTTGATGACCTCGTTGCTCTTGGATTTGGTATGTGTTGCTGCTATTACC
CGCCTTCTCTCCATATAGCTCTCTAATAGCCGATCTAGATATCCTTCACG
TTCATTCTACCCCTCTTTCCATCCCTCCTCACTTTCTACCGCAACCAAGA
CCCCTCTCCGAACTCGCTGCTGAACCGCGTCTTCCACTATCTCAATGCCT
ACAAGAACTCTTTCGCAAAGCCCATCGACTCGCGCTATGATATTGTTCTC
CTTGGTGGCGCTCTCGGATCTCTCTTCTCCCTTCTGCAGGCTCTAGCCGC
TCCCTTTATCGGTCGTCTCTCCGACCAGCGCGGCCGCAAGACCGCCCTCC
TATACTCCATGGTTGGCAACACTCTCAGCGTCGCTCTCTGGGTCGCTGCC
ACGGATTTCCGCACCTTCCTGGCCAGTCGCATTGTCGGCGGTCTCAGTGA
AGGAAACGTGCAGCTGGCCAACGCCATTGCAACCGACATCAGTGACCCCA
GCCAGCGTGGTTCGACCATGGCTCTGGTGGGCGCCTGCTTTAGCATCGCC
TTCACCTGCGGACCCGCCCTAGGAGCATTCCTCTCGAACATCACCACCGT
GGCAGCGAATCCCTTCGCGACCGCAGCCGGTGTCTCCCTTCTACTCATTG
TCGTCGAAACCGCATACATCTACTTCTGTCTGCCAGAAACCCACCCTCGT
TTCACCAAGCTCACTCATACCTCCTCAACTACCACGTCCGCCTCGAAGCC
CTCCACCTCCGCCTCCACCTCCACCCCCAAGCACAAACAACACACCAACA
ACCCCGCCATCCTCAACGCAATCCATTTCCTTTTCCTCCTCCCCTTCTCC
GGCCTCGAATTCTCCCTCCCCTTCCTGACCGCCACCTTCTACGCCGGCAG
CCAAGCCAGCCCGTCCGCCCTAAACGGCCGTCTTCTCTCCATGATGGGTC
TCATCGCCTCCCTCCTCCAAGGCACCGTCGTGCGCCGTCTCCCCCCGCTC
GTGACTGTCCGCGCCGGCGTCCTCGCCTGCACCGTATCCTTCTTCATGCT
GGCGCGCGTCTCCTCCCTCTCCGGCCTCTACGCCGCTGGCAGCCTCCTCG
CCATCACCAGTGCCACGGTCGTCACGGGCCTCAACAGCCTGGGTAGCTTC
GAGGCACAGGAGTCAGACCGCGGTGCGGTCTTGGGTAGACTCCGTAGCTG
GGGCCAGGTCGGACGCGCGGCGGGACCGTTGCTCTTCTGCTCGTTGTTTT
GGTGGGTTGGGCGCGAAATCGCCTACACTACGGGTGGGATTGCGATGGTT
ACAGTTTGCGTGGCTGTGTTTACGTGCCTGAAGTCGCCAAATATCCCTGC
AAAGGCGTAGTTGGTTCTCAGATGATACCTGTTGGATTGTTTGAAAGATT
CTGTGACGATAAAAGATAGATTTATAGAGTGAAATTTTCTGTTGAGTGTA
TGTTGTTGATCTTGGTGGTTTTATGAACTTGACCTGATATGCATTACATC
ATGTAGGAGGATATCTACACTATCATATTTATCTACTGGATGGCTGGCTG
GCTGGATCAGCGGTCAGCGGGTAGCGAAATGTACATTTAAATTACATGAA
ATAGAACAG
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Coding sequence (CDS) from alignment at ch4:2319680..2321538+

>KJC3_005326-T1 ID=KJC3_005326-T1|Name=KJC3_005326-T1|organism=Aspergillus niger KJC3|type=CDS|length=2682bp|location=Sequence derived from alignment at ch4:2319680..2321538+ (Aspergillus niger KJC3)
ATGGCGGTTGCCGCAGACCAGCGGAAGAAGATCCTCAAGGTCTTGATGAC
CTCGTTGCTCTTGGATTTGATATCCTTCACGTTCATTCTACCCCTCTTTC
CATCCCTCCTCACTTTCTACCGCAACCAAGACCCCTCTCCGAACTCGCTG
CTGAACCGCGTCTTCCACTATCTCAATGCCTACAAGAACTCTTTCGCAAA
GCCCATCGACTCGCGCTATGATATTGTTCTCCTTGGTGGCGCTCTCGGAT
CTCTCTTCTCCCTTCTGCAGGCTCTAGCCGCTCCCTTTATCGGTCGTCTC
TCCGACCAGCGCGGCCGCAAGACCGCCCTCCTATACTCCATGGTTGGCAA
CACTCTCAGCGTCGCTCTCTGGGTCGCTGCCACGGATTTCCGCACCTTCC
TGGCCAGTCGCATTGTCGGCGGTCTCAGTGAAGGAAACGTGCAGCTGGCC
AACGCCATTGCAACCGACATCAGTGACCCCAGCCAGCGTGGTTCGACCAT
GGCTCTGGTGGGCGCCTGCTTTAGCATCGCCTTCACCTGCGGACCCGCCC
TAGGAGCATTCCTCTCGAACATCACCACCGTGGCAGCGAATCCCTTCGCG
ACCGCAGCCGGTGTCTCCCTTCTACTCATTGTCGTCGAAACCGCATACAT
CTACTTCTGTCTGCCAGAAACCCACCCTCGTTTCACCAAGCTCACTCATA
CCTCCTCAACTACCACGTCCGCCTCGAAGCCCTCCACCTCCGCCTCCACC
TCCACCCCCAAGCACAAACAACACACCAACAACCCCGCCATCCTCAACGC
AATCCATTTCCTTTTCCTCCTCCCCTTCTCCGGCCTCGAATTCTCCCTCC
CCTTCCTGACCGCCACCTTCTACGCCGGCAGCCAAGCCAGCCCGTCCGCC
CTAAACGGCCGTCTTCTCTCCATGATGGGTCTCATCGCCTCCCTCCTCCA
AGGCACCGTCGTGCGCCGTCTCCCCCCGCTCGTGACTGTCCGCGCCGGCG
TCCTCGCCTGCACCGTATCCTTCTTCATGCTGGCGCGCGTCTCCTCCCTC
TCCGGCCTCTACGCCGCTGGCAGCCTCCTCGCCATCACCAGTGCCACGGT
CGTCACGGGCCTCAACAGCCTGGGTAGCTTCGAGGCACAGGAGTCAGACC
GCGGTGCGGTCTTGGGTAGACTCCGTAGCTGGGGCCAGGTCGGACGCGCG
GCGGGACCGTTGCTCTTCTGCTCGTTGTTTTGGTGGGTTGGGCGCGAAAT
CGCCTACACTACGGGTGGGATTGCGATGGTTACAGTTTGCGTGGCTGTGT
TTACGTGCCTGAAGTCGCCAAATATCCCTGCAAAGGCGTAGATGGCGGTT
GCCGCAGACCAGCGGAAGAAGATCCTCAAGGTCTTGATGACCTCGTTGCT
CTTGGATTTGATATCCTTCACGTTCATTCTACCCCTCTTTCCATCCCTCC
TCACTTTCTACCGCAACCAAGACCCCTCTCCGAACTCGCTGCTGAACCGC
GTCTTCCACTATCTCAATGCCTACAAGAACTCTTTCGCAAAGCCCATCGA
CTCGCGCTATGATATTGTTCTCCTTGGTGGCGCTCTCGGATCTCTCTTCT
CCCTTCTGCAGGCTCTAGCCGCTCCCTTTATCGGTCGTCTCTCCGACCAG
CGCGGCCGCAAGACCGCCCTCCTATACTCCATGGTTGGCAACACTCTCAG
CGTCGCTCTCTGGGTCGCTGCCACGGATTTCCGCACCTTCCTGGCCAGTC
GCATTGTCGGCGGTCTCAGTGAAGGAAACGTGCAGCTGGCCAACGCCATT
GCAACCGACATCAGTGACCCCAGCCAGCGTGGTTCGACCATGGCTCTGGT
GGGCGCCTGCTTTAGCATCGCCTTCACCTGCGGACCCGCCCTAGGAGCAT
TCCTCTCGAACATCACCACCGTGGCAGCGAATCCCTTCGCGACCGCAGCC
GGTGTCTCCCTTCTACTCATTGTCGTCGAAACCGCATACATCTACTTCTG
TCTGCCAGAAACCCACCCTCGTTTCACCAAGCTCACTCATACCTCCTCAA
CTACCACGTCCGCCTCGAAGCCCTCCACCTCCGCCTCCACCTCCACCCCC
AAGCACAAACAACACACCAACAACCCCGCCATCCTCAACGCAATCCATTT
CCTTTTCCTCCTCCCCTTCTCCGGCCTCGAATTCTCCCTCCCCTTCCTGA
CCGCCACCTTCTACGCCGGCAGCCAAGCCAGCCCGTCCGCCCTAAACGGC
CGTCTTCTCTCCATGATGGGTCTCATCGCCTCCCTCCTCCAAGGCACCGT
CGTGCGCCGTCTCCCCCCGCTCGTGACTGTCCGCGCCGGCGTCCTCGCCT
GCACCGTATCCTTCTTCATGCTGGCGCGCGTCTCCTCCCTCTCCGGCCTC
TACGCCGCTGGCAGCCTCCTCGCCATCACCAGTGCCACGGTCGTCACGGG
CCTCAACAGCCTGGGTAGCTTCGAGGCACAGGAGTCAGACCGCGGTGCGG
TCTTGGGTAGACTCCGTAGCTGGGGCCAGGTCGGACGCGCGGCGGGACCG
TTGCTCTTCTGCTCGTTGTTTTGGTGGGTTGGGCGCGAAATCGCCTACAC
TACGGGTGGGATTGCGATGGTTACAGTTTGCGTGGCTGTGTTTACGTGCC
TGAAGTCGCCAAATATCCCTGCAAAGGCGTAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
Vocabulary: Molecular Function
TermDefinition
GO:0022857transmembrane transporter activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_005326KJC3_005326Aspergillus niger KJC3gene


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005326-T1.utr5p1KJC3_005326-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005326-T1.exon1KJC3_005326-T1.exon1Aspergillus niger KJC3exon
KJC3_005326-T1.exon2KJC3_005326-T1.exon2Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005326-T1.cdsKJC3_005326-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005326-T1.utr3p1KJC3_005326-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005326-T1KJC3_005326-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR036259
DBxrefInterPro:IPR020846
DBxrefInterPro:IPR011701
DBxrefPFAM:PF07690
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch4supercontigch4:2319680..2321538 +
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