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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:2321538..2323262- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_005327-T1 ID=KJC3_005327-T1|Name=KJC3_005327-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1725bp|location=Sequence derived from alignment at ch4:2321538..2323262- (Aspergillus niger KJC3)
CCACGTTCCATCCTCACTCCATCTTCCCTCTGCACTTGCTGTCTCATGCA
TCTGCCAGCTTATGACTTGACCCCACCCCTCCGCTGCCACCTCGCAAGGC
ATGCATTGATCTGCTCTCAACACAAACTTCCTGGGTGAACCTCCGGGAAT
GCCGCCGAAGCTGGTCTCTGGCCCTGCGCCACGCGCTCTCCGACGTCGTC
TACTACCTCCTACAACACCCTCTCCGATAAAACCGCCTGTTTCCCGGGAA
CAATACTTCGTTTCCCCTTCTCCGCGGACCCTGGCCCAGCCGCGACCTGA
CATTATACATGGTCCGCAGTTGACCCGCGAGTCACCGACACTCTTCTCGC
AAACTGGTTTCCGACCGTCTGTATCGGATCCTCTTGACGGGGGTTCGAAT
CGAGATCATGAGCCTCCTGACGAGCGCATCTTGAAGCTTGGAAAGAGTGG
GTGCTCCCCAAATCAACAGGCAATCCTACAGTATGTGTCCGATGCTGACC
GAACGAACCTCCCACAGCTCTCCGCATCCTCTCGCCTCTCCTCCCCACCC
TTCTCATCAACCCGCTACCCCCGAACATACTCTCCCCCAGCATAGCCTTG
CACCTATTCCCCTCGACACACCCGCATCTCCCCACTGTCAAGGGCCGAAC
ATTGTATCGCGCCGCGCTCTGGACCGTCCCAGTAGCATGGAGCAGTCTCC
CCCTACTAGGGAACGTGAAGCTCCAAATTCTCAGTGAGCGTATCGTCCGC
GCAGGAACGGTCCTCGAACCCGAACGGCCTGACAGCGACCACGATACCAG
CGACGAGCGTCTCGTCGTGCGCTGGCGAACGGAACCGCGGAACGAATCCA
CTACCTCCTCCGACCCAGAAGGTTCCAGTACAGCGTTCACCGCCGCATCT
CCTACTCTACCTACTGATACCCAAGGCACCAACAACAATAATGGCAGTCA
CTTGTCATCCTCGAAAACGGGAATCAACAAAGGTCTAAGCGTCCTGCTGG
GTGGGGACGCTCCGATCTTCAAGTTGAAGAAGGAAGAGCAATTTACGGGA
CTATTCATATTCTCCTTCGACGAGGAAGGTCGCATTGCGTCGCATACGAT
CGAGCATGCGGATGATGCGCGCGGATGGAATCGCACGCCTAAGTTCGTGA
CCCTGACTGACTGGTTGATTGGGAAGGCACGAGGATCGCTTGACCCTGTT
GCAGAGCCGGGACTAGCGATGCAGGGGTGTCATTGGCAGGATGGACAGGG
GTTTCTTGATAGGGATCGGTACCATCACGAACATCATGAACAACAATATT
ATCCTCATGGTCTGCGGTCGTAGGCCCTCAGGCCTCGCTTTTCCTTTACC
GATAAGATCTTGCTGATATGGATCCATGACCGTATTGGTGCTCATTTACT
GTTCAATCCTCCACTCTTTATCCTTTTCTTTCCGGTCTACTCTCAATATC
AAAGGGATCAATGTATAGAGGCCTTTGCAGGGCGGTATGGTCTGGAGAGA
AATGATCCGATCTCAAGGTTGCTTGACCACTCTGGTTTTGTTTCTTTACG
GTGGCTGGCTATCTGATTTGCTTGTTTGATCAGTTGACGGCGATGTTTTC
GAGGAGAGTTCTAGATGCTCATATTTATTCTCTCTTGTCTTTTCCACTCC
TTCCATGTATTTTTCTCACTCCTCACTCCTCTCCAATGTATATTATACCC
AGTAATGACCAATTTTGAATGTTAC back to topCoding sequence (CDS) from alignment at ch4:2321538..2323262- >KJC3_005327-T1 ID=KJC3_005327-T1|Name=KJC3_005327-T1|organism=Aspergillus niger KJC3|type=CDS|length=2208bp|location=Sequence derived from alignment at ch4:2321538..2323262- (Aspergillus niger KJC3)
CTCTCCGCATCCTCTCGCCTCTCCTCCCCACCCTTCTCATCAACCCGCTA
CCCCCGAACATACTCTCCCCCAGCATAGCCTTGCACCTATTCCCCTCGAC
ACACCCGCATCTCCCCACTGTCAAGGGCCGAACATTGTATCGCGCCGCGC
TCTGGACCGTCCCAGTAGCATGGAGCAGTCTCCCCCTACTAGGGAACGTG
AAGCTCCAAATTCTCAGTGAGCGTATCGTCCGCGCAGGAACGGTCCTCGA
ACCCGAACGGCCTGACAGCGACCACGATACCAGCGACGAGCGTCTCGTCG
TGCGCTGGCGAACGGAACCGCGGAACGAATCCACTACCTCCTCCGACCCA
GAAGGTTCCAGTACAGCGTTCACCGCCGCATCTCCTACTCTACCTACTGA
TACCCAAGGCACCAACAACAATAATGGCAGTCACTTGTCATCCTCGAAAA
CGGGAATCAACAAAGGTCTAAGCGTCCTGCTGGGTGGGGACGCTCCGATC
TTCAAGTTGAAGAAGGAAGAGCAATTTACGGGACTATTCATATTCTCCTT
CGACGAGGAAGGTCGCATTGCGTCGCATACGATCGAGCATGCGGATGATG
CGCGCGGATGGAATCGCACGCCTAAGTTCGTGACCCTGACTGACTGGTTG
ATTGGGAAGGCACGAGGATCGCTTGACCCTGTTGCAGAGCCGGGACTAGC
GATGCAGGGGTGTCATTGGCAGGATGGACAGGGGTTTCTTGATAGGGATC
GGTACCATCACGAACATCATGAACAACAATATTATCCTCATGGTCTGCGG
TCGTAGATGCCGCCGAAGCTGGTCTCTGGCCCTGCGCCACGCGCTCTCCG
ACGTCGTCTACTACCTCCTACAACACCCTCTCCGATAAAACCGCCTGTTT
CCCGGGAACAATACTTCGTTTCCCCTTCTCCGCGGACCCTGGCCCAGCCG
CGACCTGACATTATACATGGTCCGCAGTTGACCCGCGAGTCACCGACACT
CTTCTCGCAAACTGGTTTCCGACCGTCTGTATCGGATCCTCTTGACGGGG
GTTCGAATCGAGATCATGAGCCTCCTGACGAGCGCATCTTGAAGCTTGGA
AAGACTCTCCGCATCCTCTCGCCTCTCCTCCCCACCCTTCTCATCAACCC
GCTACCCCCGAACATACTCTCCCCCAGCATAGCCTTGCACCTATTCCCCT
CGACACACCCGCATCTCCCCACTGTCAAGGGCCGAACATTGTATCGCGCC
GCGCTCTGGACCGTCCCAGTAGCATGGAGCAGTCTCCCCCTACTAGGGAA
CGTGAAGCTCCAAATTCTCAGTGAGCGTATCGTCCGCGCAGGAACGGTCC
TCGAACCCGAACGGCCTGACAGCGACCACGATACCAGCGACGAGCGTCTC
GTCGTGCGCTGGCGAACGGAACCGCGGAACGAATCCACTACCTCCTCCGA
CCCAGAAGGTTCCAGTACAGCGTTCACCGCCGCATCTCCTACTCTACCTA
CTGATACCCAAGGCACCAACAACAATAATGGCAGTCACTTGTCATCCTCG
AAAACGGGAATCAACAAAGGTCTAAGCGTCCTGCTGGGTGGGGACGCTCC
GATCTTCAAGTTGAAGAAGGAAGAGCAATTTACGGGACTATTCATATTCT
CCTTCGACGAGGAAGGTCGCATTGCGTCGCATACGATCGAGCATGCGGAT
GATGCGCGCGGATGGAATCGCACGCCTAAGTTCGTGACCCTGACTGACTG
GTTGATTGGGAAGGCACGAGGATCGCTTGACCCTGTTGCAGAGCCGGGAC
TAGCGATGCAGGGGTGTCATTGGCAGGATGGACAGGGGTTTCTTGATAGG
GATCGGTACCATCACGAACATCATGAACAACAATATTATCCTCATGGTCT
GCGGTCGTAGATGCCGCCGAAGCTGGTCTCTGGCCCTGCGCCACGCGCTC
TCCGACGTCGTCTACTACCTCCTACAACACCCTCTCCGATAAAACCGCCT
GTTTCCCGGGAACAATACTTCGTTTCCCCTTCTCCGCGGACCCTGGCCCA
GCCGCGACCTGACATTATACATGGTCCGCAGTTGACCCGCGAGTCACCGA
CACTCTTCTCGCAAACTGGTTTCCGACCGTCTGTATCGGATCCTCTTGAC
GGGGGTTCGAATCGAGATCATGAGCCTCCTGACGAGCGCATCTTGAAGCT
TGGAAAGA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_005327-T1.utr3p1 | KJC3_005327-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_005327-T1.utr5p1 | KJC3_005327-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR031342 |
| DBxref | PFAM:PF17119 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch4 | supercontig | ch4:2321538..2323262 - |
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