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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:2350486..2352229+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_005335-T1 ID=KJC3_005335-T1|Name=KJC3_005335-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1744bp|location=Sequence derived from alignment at ch4:2350486..2352229+ (Aspergillus niger KJC3)
GATCAAGATCACTCTGCGGCCATCTACCAAAGTTCTCTGCTACGGATCTC
GCCTCACAATTAAGCTTGATCATTTTCCGATACAATTGCCTAGCTGATCT
TGCGCATGACGACGGAACAACCCAGGCGCAGAACCACCTCACGATAAACC
TATCCGACACAGATATAGAGTGCGGACCACGCGAGCTTCATTCCATCTAT
AACCATTACATTCATACATAACGATTCAATTGATCTGGGCGACCGCTTCC
CTGTCCCCTAAACATTAGCTCGCGCTAGCACTACCAACCACAATGCTCTC
CCTTCCACTCATCACACCTCGCGATGTACGTGCCATCGGCTTCTGCGAAT
TCTCCACAATACCACCCTTGATCTCCCATTGACGTGCATCCTTGGCTAAT
TCGCCTCTCTTATAGTCTCATGAACTCTGGTTCGGCTCCTCACAACCCTA
CCGAACCTCCTCCCAGCACCAGCCTTCCGCCGGAGAAACACAACCACATG
CCCGCCGCAATGGCTCTACTGCGCTAGGCGGACGTGCCTCAGCCGCTGCC
TCAGGAAATATGCTTTCATCCCTCCTCCTGGAAGAGCGTGCTCTACGTGC
GCGCAAGAACAATATTGCCTCGTTCGGATACTCGTGGATCAGGCCGGCCG
GGTGTCCCAAGACTATGCTGGGCATGAAAGAGGAGGAGGCGGAACGCGAA
GAGGCGCTGGCCGCCGCAGCGGCAGAGAGAGCAGCGGCAGCGGCAGCAGC
GGAGGTGGGCGTGGATGGATTAGACGAGCTCGGGAACCAGACACAGGGTA
CTTTTGATGGCGATGGCCAGGATGACACAGGCATGGAAAGAGATCTGGAC
GACGATATCCCCGACGCGGATGCAGATGGGCTGGTCGAGGAAGGCGAGGA
AGGGCTGGAAGAGGAGGATGTCGTGGATGAGGGAGAATACATGGAGCGTG
ATCTAGACGATGACATTCCGGAGGCATTCCCGGATGATGACGAGCTCGAA
GAGGAAGAAGACTTGGAGGAAGAAAATGACGACTTCGACAATCAGCCGGA
CCTGGATAACGATATCCCCAGCGCGGCCGAAGAAGACTATGATGACGAGG
GTATGAGCGAAGGGGAGGAAGATATGGGTCGGGACCTGGATGATGACATC
CCCGAGGCAGTCGAGGACCGGTCAGAGCAGGAAGAGGAATGGCAACACAC
CGACACCGATGTGGAATTTGACGATGAGGAGGATGTCAGCTTCTCGCAAG
ACCCCTTCTCGCAGAGCTTCCGCGCCAGTACAACTAGCAGTCGAGGCCTG
CCACCGCCTATTCGGCGGGAGAGAGAAACCGAAGCCCAACGACGGTTCTT
ACAGCGGTGGAGTGGAGGTGGTGATGCCTTTGACACTAGCAGCATGCTCG
TCGACGATGAGGACCTTCGCGCTTCTTTGACCAGTCAGAGCAGCCGACGG
AGTTTCTTTAGTCGGTTCCCTAGACGGCGCATGGGAGGCCCCAGAGACAG
TCTCGAGTGATGACAAGTTCACTTGTTATATGCATTAGTGTACTATAATT
CTCGGGGACAGGTTATGGAGTCCTCGGTTATCGTGAAAGGGTGGGATGGC
TGTGTTTATATAATTGCATGGAGCCGAGGACGGCGTTTTGGGCCCATACA
GGATTTTAAAGACTTACGTTTTAGTTCTACTACCACGCATGATACAATGG
CCTTGAAAGTAGCAGTCAAGAACAAATATCTCTCGTATCGCAAG back to topCoding sequence (CDS) from alignment at ch4:2350486..2352229+ >KJC3_005335-T1 ID=KJC3_005335-T1|Name=KJC3_005335-T1|organism=Aspergillus niger KJC3|type=CDS|length=951bp|location=Sequence derived from alignment at ch4:2350486..2352229+ (Aspergillus niger KJC3)
ATGCTTTCATCCCTCCTCCTGGAAGAGCGTGCTCTACGTGCGCGCAAGAA
CAATATTGCCTCGTTCGGATACTCGTGGATCAGGCCGGCCGGGTGTCCCA
AGACTATGCTGGGCATGAAAGAGGAGGAGGCGGAACGCGAAGAGGCGCTG
GCCGCCGCAGCGGCAGAGAGAGCAGCGGCAGCGGCAGCAGCGGAGGTGGG
CGTGGATGGATTAGACGAGCTCGGGAACCAGACACAGGGTACTTTTGATG
GCGATGGCCAGGATGACACAGGCATGGAAAGAGATCTGGACGACGATATC
CCCGACGCGGATGCAGATGGGCTGGTCGAGGAAGGCGAGGAAGGGCTGGA
AGAGGAGGATGTCGTGGATGAGGGAGAATACATGGAGCGTGATCTAGACG
ATGACATTCCGGAGGCATTCCCGGATGATGACGAGCTCGAAGAGGAAGAA
GACTTGGAGGAAGAAAATGACGACTTCGACAATCAGCCGGACCTGGATAA
CGATATCCCCAGCGCGGCCGAAGAAGACTATGATGACGAGGGTATGAGCG
AAGGGGAGGAAGATATGGGTCGGGACCTGGATGATGACATCCCCGAGGCA
GTCGAGGACCGGTCAGAGCAGGAAGAGGAATGGCAACACACCGACACCGA
TGTGGAATTTGACGATGAGGAGGATGTCAGCTTCTCGCAAGACCCCTTCT
CGCAGAGCTTCCGCGCCAGTACAACTAGCAGTCGAGGCCTGCCACCGCCT
ATTCGGCGGGAGAGAGAAACCGAAGCCCAACGACGGTTCTTACAGCGGTG
GAGTGGAGGTGGTGATGCCTTTGACACTAGCAGCATGCTCGTCGACGATG
AGGACCTTCGCGCTTCTTTGACCAGTCAGAGCAGCCGACGGAGTTTCTTT
AGTCGGTTCCCTAGACGGCGCATGGGAGGCCCCAGAGACAGTCTCGAGTG
A back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005680 | anaphase-promoting complex |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0031145 | anaphase-promoting complex-dependent catabolic process |
| GO:0030071 | regulation of mitotic metaphase/anaphase transition |
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_005335-T1.utr5p1 | KJC3_005335-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_005335-T1.utr3p1 | KJC3_005335-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR008402 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch4 | supercontig | ch4:2350486..2352229 + |
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