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KJC3_005341-T1, KJC3_005341-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_005341-T1
Unique NameKJC3_005341-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch4:2362485..2363035-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_005341-T1 ID=KJC3_005341-T1|Name=KJC3_005341-T1|organism=Aspergillus niger KJC3|type=mRNA|length=551bp|location=Sequence derived from alignment at ch4:2362485..2363035- (Aspergillus niger KJC3)
ATGCGTTCCAAGTTTAAGGACGAGCACCCCTTCGAGAAGCGCAAGGCAGA
GGCCGAGCGTATCCGTCAGAAATATGCCGATCGCATTCCAGTACGTCTAT
CCTTTGTTTTATTTTCTACTGTGATCTTGATTTCACGGTCTTTTGGGGGA
AGGAACGGGTCTCTAGCTCACCGCTTGTTCGAGTCGCTAACCCGGCTCCT
ATCCTACAGGTAATCTGCGAAAAGGTCGAGAAATCGGACATCGCTACCAT
CGACAAGAAGAAATATCTTGTCCCTGCCGACCTTACCGTTGGGCAGTTCG
TCTACGTGATCCGTAAGCGGATTAAGCTGTCCCCCGAGAAGGCGATCTTT
ATCTTTGTCGACGAGGTTTTGCCGCCTACGGCCGCTCTCATGAGCAGTAT
CTACGAAGAGCACAAGGATGAAGATGGCTTCTTGTATATCACGTATGCCG
ATCCCTCTGATTTCCTACTACCACTGTTCTGTGTGCATAGTGCTAACTCG
GATCTTCTCTTTATCAGGTACTCCGGCGAGAATACGTTTGGTGACTGCTA
G
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Coding sequence (CDS) from alignment at ch4:2362485..2363035-

>KJC3_005341-T1 ID=KJC3_005341-T1|Name=KJC3_005341-T1|organism=Aspergillus niger KJC3|type=CDS|length=1071bp|location=Sequence derived from alignment at ch4:2362485..2363035- (Aspergillus niger KJC3)
GTACTCCGGCGAGAATACGTTTGGTGACTGCTAGGTAATCTGCGAAAAGG
TCGAGAAATCGGACATCGCTACCATCGACAAGAAGAAATATCTTGTCCCT
GCCGACCTTACCGTTGGGCAGTTCGTCTACGTGATCCGTAAGCGGATTAA
GCTGTCCCCCGAGAAGGCGATCTTTATCTTTGTCGACGAGGTTTTGCCGC
CTACGGCCGCTCTCATGAGCAGTATCTACGAAGAGCACAAGGATGAAGAT
GGCTTCTTGTATATCACATGCGTTCCAAGTTTAAGGACGAGCACCCCTTC
GAGAAGCGCAAGGCAGAGGCCGAGCGTATCCGTCAGAAATATGCCGATCG
CATTCCAGTACTCCGGCGAGAATACGTTTGGTGACTGCTAGGTAATCTGC
GAAAAGGTCGAGAAATCGGACATCGCTACCATCGACAAGAAGAAATATCT
TGTCCCTGCCGACCTTACCGTTGGGCAGTTCGTCTACGTGATCCGTAAGC
GGATTAAGCTGTCCCCCGAGAAGGCGATCTTTATCTTTGTCGACGAGGTT
TTGCCGCCTACGGCCGCTCTCATGAGCAGTATCTACGAAGAGCACAAGGA
TGAAGATGGCTTCTTGTATATCACATGCGTTCCAAGTTTAAGGACGAGCA
CCCCTTCGAGAAGCGCAAGGCAGAGGCCGAGCGTATCCGTCAGAAATATG
CCGATCGCATTCCAGTACTCCGGCGAGAATACGTTTGGTGACTGCTAGGT
AATCTGCGAAAAGGTCGAGAAATCGGACATCGCTACCATCGACAAGAAGA
AATATCTTGTCCCTGCCGACCTTACCGTTGGGCAGTTCGTCTACGTGATC
CGTAAGCGGATTAAGCTGTCCCCCGAGAAGGCGATCTTTATCTTTGTCGA
CGAGGTTTTGCCGCCTACGGCCGCTCTCATGAGCAGTATCTACGAAGAGC
ACAAGGATGAAGATGGCTTCTTGTATATCACATGCGTTCCAAGTTTAAGG
ACGAGCACCCCTTCGAGAAGCGCAAGGCAGAGGCCGAGCGTATCCGTCAG
AAATATGCCGATCGCATTCCA
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATG8KJC3_005341Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005341-T1KJC3_005341-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005341-T1.cdsKJC3_005341-T1.cdsAspergillus niger KJC3CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005341-T1.exon3KJC3_005341-T1.exon3Aspergillus niger KJC3exon
KJC3_005341-T1.exon2KJC3_005341-T1.exon2Aspergillus niger KJC3exon
KJC3_005341-T1.exon1KJC3_005341-T1.exon1Aspergillus niger KJC3exon


Properties
Property NameValue
NoteBUSCO:EOG09265BTA
DBxrefInterPro:IPR029071
DBxrefInterPro:IPR004241
DBxrefPFAM:PF02991
DBxrefPFAM:PF04110
Productubiquitin-like protein atg8
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch4supercontigch4:2362485..2363035 -
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