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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:2364178..2365559+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_005342-T1 ID=KJC3_005342-T1|Name=KJC3_005342-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1382bp|location=Sequence derived from alignment at ch4:2364178..2365559+ (Aspergillus niger KJC3)
ATGGCTGTTCCCCGACCATATATGCCTCTTCGGAGGTCGCTCTGCCAATT
CTCATCTCGGACCTGTCACACACCTCGCAACCTCTCAGCGCCCTTTCGCA
GATACTCCTCGGAACAGAAGCCTCCTTCCGAACCCAAACCATTCACTGTC
TGGAGACCATACCTACGGCTGGCCATTGGTGTGCCCTTTATCGGTGCTTT
GGTGTATTCCATGGTAGGCCTCACCCACCATATAACTTGCGCGATGTCCC
AACCTGACCATTTCCAATATAGATGACGGAAGAAGTGACCGAACTCGACT
CGCCATCCCTCGTGGAGCTCGATGAAACGCTTAAGAAGCAAGCCACAATC
AGCGAACAATCTCCCATGCGCCTGCGCATGGAGAAGCTGATCAAAGACCA
CCAGCAGAAAATCATTGAAGAGCTAAGCCGGATAGATGGAAAGCAATTCA
AGACTGATACCTGGTCGCGCCCCAACGGCGGAGGTGGAATATCCTGTGTC
CTTCAAGACGGAAACGTCTTCGAGAAAGCCGGAGTCAACGTGTCCATCGT
CTACGGCGAACTCCCCCGGCCAGCCATTGAGAAGATGCGCGCGGACCACA
AGTCCTTCGTCGGCGCCGACGTGGACTCCTTGAGCTTCTTCGCCGCCGGC
CTGTCCCTCGTTCTCCACCCCCACAACCCCATGGCCCCAACCGTCCACCT
GAACTACCGGTACTTCGAGACATCCGATCCTAAAGACCCCCTCAACGGCG
ACAAGAACTGGTGGTTCGGTGGCGGCACCGATCTGACCCCAACTTACCTA
TTCCCCGAAGACGCCAGACATTTCCACCAGACCATCAAAGATGCTTGTGA
TCGTCACGACGCCACATACTACCCGAAGTTCAAAGCCTGGTGCGATAAGT
ACTTCTATATCCCCCACCGCCGCGAATGCCGCGGCGTAGGAGGTATCTTC
TTCGACGACCTGGACGCCAGCTTCCTCCAGTCCTCGTCGACCTCATCCCA
AAATCCCCAAGAGACTCTCTTCTCCTTCGTCTCAGACGGTCTCGCTTCTT
TCCTCCCCTCTTATGTCCCCATCATCGAACGCCGGAAGGACATGCCCTTC
ACGCCTGAGCAAAAGGAATGGCAACAGCTCCGACGCGGTCGCTACGTCGA
GTTCAACCTCGTCTATGACCGCGGTACTAGCTTCGGTCTCCGCACTCCTA
ATGCCCGCATCGAGAGTATTCTGATGAGTTTGCCCCGCACGGCAAGCTGG
GCTTACATGGACCCCGTATCGGGAACCCGGACGGAGGATTCCGTAGATGG
TGATGAGGCGCTTCTGGGCGAGGGCAAGGAGCGCGAGAAGGAGATCATGG
ATGTTTTGAAACATCCCAGACAATGGGTGTAA back to topCoding sequence (CDS) from alignment at ch4:2364178..2365559+ >KJC3_005342-T1 ID=KJC3_005342-T1|Name=KJC3_005342-T1|organism=Aspergillus niger KJC3|type=CDS|length=2646bp|location=Sequence derived from alignment at ch4:2364178..2365559+ (Aspergillus niger KJC3)
ATGGCTGTTCCCCGACCATATATGCCTCTTCGGAGGTCGCTCTGCCAATT
CTCATCTCGGACCTGTCACACACCTCGCAACCTCTCAGCGCCCTTTCGCA
GATACTCCTCGGAACAGAAGCCTCCTTCCGAACCCAAACCATTCACTGTC
TGGAGACCATACCTACGGCTGGCCATTGGTGTGCCCTTTATCGGTGCTTT
GGTGTATTCCATGATGACGGAAGAAGTGACCGAACTCGACTCGCCATCCC
TCGTGGAGCTCGATGAAACGCTTAAGAAGCAAGCCACAATCAGCGAACAA
TCTCCCATGCGCCTGCGCATGGAGAAGCTGATCAAAGACCACCAGCAGAA
AATCATTGAAGAGCTAAGCCGGATAGATGGAAAGCAATTCAAGACTGATA
CCTGGTCGCGCCCCAACGGCGGAGGTGGAATATCCTGTGTCCTTCAAGAC
GGAAACGTCTTCGAGAAAGCCGGAGTCAACGTGTCCATCGTCTACGGCGA
ACTCCCCCGGCCAGCCATTGAGAAGATGCGCGCGGACCACAAGTCCTTCG
TCGGCGCCGACGTGGACTCCTTGAGCTTCTTCGCCGCCGGCCTGTCCCTC
GTTCTCCACCCCCACAACCCCATGGCCCCAACCGTCCACCTGAACTACCG
GTACTTCGAGACATCCGATCCTAAAGACCCCCTCAACGGCGACAAGAACT
GGTGGTTCGGTGGCGGCACCGATCTGACCCCAACTTACCTATTCCCCGAA
GACGCCAGACATTTCCACCAGACCATCAAAGATGCTTGTGATCGTCACGA
CGCCACATACTACCCGAAGTTCAAAGCCTGGTGCGATAAGTACTTCTATA
TCCCCCACCGCCGCGAATGCCGCGGCGTAGGAGGTATCTTCTTCGACGAC
CTGGACGCCAGCTTCCTCCAGTCCTCGTCGACCTCATCCCAAAATCCCCA
AGAGACTCTCTTCTCCTTCGTCTCAGACGGTCTCGCTTCTTTCCTCCCCT
CTTATGTCCCCATCATCGAACGCCGGAAGGACATGCCCTTCACGCCTGAG
CAAAAGGAATGGCAACAGCTCCGACGCGGTCGCTACGTCGAGTTCAACCT
CGTCTATGACCGCGGTACTAGCTTCGGTCTCCGCACTCCTAATGCCCGCA
TCGAGAGTATTCTGATGAGTTTGCCCCGCACGGCAAGCTGGGCTTACATG
GACCCCGTATCGGGAACCCGGACGGAGGATTCCGTAGATGGTGATGAGGC
GCTTCTGGGCGAGGGCAAGGAGCGCGAGAAGGAGATCATGGATGTTTTGA
AACATCCCAGACAATGGGTGTAAATGGCTGTTCCCCGACCATATATGCCT
CTTCGGAGGTCGCTCTGCCAATTCTCATCTCGGACCTGTCACACACCTCG
CAACCTCTCAGCGCCCTTTCGCAGATACTCCTCGGAACAGAAGCCTCCTT
CCGAACCCAAACCATTCACTGTCTGGAGACCATACCTACGGCTGGCCATT
GGTGTGCCCTTTATCGGTGCTTTGGTGTATTCCATGATGACGGAAGAAGT
GACCGAACTCGACTCGCCATCCCTCGTGGAGCTCGATGAAACGCTTAAGA
AGCAAGCCACAATCAGCGAACAATCTCCCATGCGCCTGCGCATGGAGAAG
CTGATCAAAGACCACCAGCAGAAAATCATTGAAGAGCTAAGCCGGATAGA
TGGAAAGCAATTCAAGACTGATACCTGGTCGCGCCCCAACGGCGGAGGTG
GAATATCCTGTGTCCTTCAAGACGGAAACGTCTTCGAGAAAGCCGGAGTC
AACGTGTCCATCGTCTACGGCGAACTCCCCCGGCCAGCCATTGAGAAGAT
GCGCGCGGACCACAAGTCCTTCGTCGGCGCCGACGTGGACTCCTTGAGCT
TCTTCGCCGCCGGCCTGTCCCTCGTTCTCCACCCCCACAACCCCATGGCC
CCAACCGTCCACCTGAACTACCGGTACTTCGAGACATCCGATCCTAAAGA
CCCCCTCAACGGCGACAAGAACTGGTGGTTCGGTGGCGGCACCGATCTGA
CCCCAACTTACCTATTCCCCGAAGACGCCAGACATTTCCACCAGACCATC
AAAGATGCTTGTGATCGTCACGACGCCACATACTACCCGAAGTTCAAAGC
CTGGTGCGATAAGTACTTCTATATCCCCCACCGCCGCGAATGCCGCGGCG
TAGGAGGTATCTTCTTCGACGACCTGGACGCCAGCTTCCTCCAGTCCTCG
TCGACCTCATCCCAAAATCCCCAAGAGACTCTCTTCTCCTTCGTCTCAGA
CGGTCTCGCTTCTTTCCTCCCCTCTTATGTCCCCATCATCGAACGCCGGA
AGGACATGCCCTTCACGCCTGAGCAAAAGGAATGGCAACAGCTCCGACGC
GGTCGCTACGTCGAGTTCAACCTCGTCTATGACCGCGGTACTAGCTTCGG
TCTCCGCACTCCTAATGCCCGCATCGAGAGTATTCTGATGAGTTTGCCCC
GCACGGCAAGCTGGGCTTACATGGACCCCGTATCGGGAACCCGGACGGAG
GATTCCGTAGATGGTGATGAGGCGCTTCTGGGCGAGGGCAAGGAGCGCGA
GAAGGAGATCATGGATGTTTTGAAACATCCCAGACAATGGGTGTAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0004109 | coproporphyrinogen oxidase activity |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0055114 | oxidation-reduction process |
| GO:0006779 | porphyrin-containing compound biosynthetic process |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG09262CUO |
| DBxref | InterPro:IPR018375 |
| DBxref | InterPro:IPR036406 |
| DBxref | InterPro:IPR001260 |
| DBxref | PFAM:PF01218 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch4 | supercontig | ch4:2364178..2365559 + |
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