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KJC3_005351-T1, KJC3_005351-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_005351-T1
Unique NameKJC3_005351-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch4:2395129..2396370+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_005351-T1 ID=KJC3_005351-T1|Name=KJC3_005351-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1242bp|location=Sequence derived from alignment at ch4:2395129..2396370+ (Aspergillus niger KJC3)
ATGATTGCGTTACAAAATCACGCTATCTTACCTCCTCCCGCCAAAGTGGA
TATCTCACTGCTGCTGAAGCCCCAGGATGAAGAGGAAGCCGCCTCGGTGA
CGACAGCGCCTGGCTACCCACCCAGCGCAATCCCGCCGCCCTCGGTAGCA
CCTGCGTTGCCAGTAGCTGCTCCAGCATCGTTGTCCTCGGTCCCCCCAGT
GCCCCAGCTTACGTCTAAAATTCCGGCTACGGTGCCTGCCAAGCGCCTTC
AACCTGCCCACACTGCAGAGTCGCCGGCTAAAAAGCAATCCAAGTGGTCC
CCGGAGGAGGATGCCCTTATCATCGAGCTACGAGGAAGCGGTATGAAATG
GGAGGATATTAGTAAACGGCTTCCTGGCCGAAGTGCCATCAGTTGCCGTC
TACACTATCAGAATTACTTGGAACGCAGAAGTGAGTGGGATGAGGATAAA
AAGAACAAACTTGCAAGGTTATACGAAAGGTATGTTCTATGCGATAGCGA
GGCGGCGCCTCGAGATCATTAAAAGACGGTTGTTGATTGTCATTGCAGGT
TCAAAGCAGAGATGTGGTCAAAGGTAGCAGAAGAGATGGCCATTCCGTGG
AGGGCTGCAGAAGCCATGCACTGGCAACTGGGAGAACAGGAAATGGCGCG
TCGAGCGGGAGTAGTCCCGTTCTCATTATCAAGTACTGCCATAGATCCGC
CAGCGCCCCGAACTCGCAGAGCCAGCACGTCTCTATCTCGACCAAGAAAA
GGATCGACATCCCGTCCGATCCCCCCTCCCCCCCAACTTCCTTCCGTGGA
AGAGCTTACCGCTGGAGTGCCTGCATTTGCACCGCACCCAACTTTTCCGG
CCCCTCGCGAACCTTATAGATTGGGGCGACCCTTGGATCTGGGTGGTCAC
AGTAGCCATCTTGGACCCAACCTCGGTCTTCCCCCTCGAACCCTCCCGTA
GAGGGCATGAAGAAAACGATGTCTATGCCTGTGTGTTTTGCGTTATTACG
ATTTGCATAGCGCTGGTTGGAGGTATATCTTCTTCACTCATGGGAGGCTT
GTCATACAAGAGCTCTTCCGAGTGCGTGTGTGCGCGTTTTTCATTATCCT
CATCTGGCTTTGATCTTGCTACACATGAAAGGGCACCTTCGAGAGGAGGC
CTCAATTTGACGAGCCCAATGCTCGTATCGTCGTTCCTGTCGTGAGTGCT
ATGCAGATGTGGATGACGGGCTTCGAGGCTGGCTCTCGATGA
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Coding sequence (CDS) from alignment at ch4:2395129..2396370+

>KJC3_005351-T1 ID=KJC3_005351-T1|Name=KJC3_005351-T1|organism=Aspergillus niger KJC3|type=CDS|length=4272bp|location=Sequence derived from alignment at ch4:2395129..2396370+ (Aspergillus niger KJC3)
ATGATTGCGTTACAAAATCACGCTATCTTACCTCCTCCCGCCAAAGTGGA
TATCTCACTGCTGCTGAAGCCCCAGGATGAAGAGGAAGCCGCCTCGGTGA
CGACAGCGCCTGGCTACCCACCCAGCGCAATCCCGCCGCCCTCGGTAGCA
CCTGCGTTGCCAGTAGCTGCTCCAGCATCGTTGTCCTCGGTCCCCCCAGT
GCCCCAGCTTACGTCTAAAATTCCGGCTACGGTGCCTGCCAAGCGCCTTC
AACCTGCCCACACTGCAGAGTCGCCGGCTAAAAAGCAATCCAAGTGGTCC
CCGGAGGAGGATGCCCTTATCATCGAGCTACGAGGAAGCGGTATGAAATG
GGAGGATATTAGTAAACGGCTTCCTGGCCGAAGTGCCATCAGTTGCCGTC
TACACTATCAGAATTACTTGGAACGCAGAAGTGAGTGGGATGAGGATAAA
AAGAACAAACTTGCAAGGTTATACGAAAGGTTCAAAGCAGAGATGTGGTC
AAAGGTAGCAGAAGAGATGGCCATTCCGTGGAGGGCTGCAGAAGCCATGC
ACTGGCAACTGGGAGAACAGGAAATGATCCGCCAGCGCCCCGAACTCGCA
GAGCCAGCACGTCTCTATCTCGACCAAGAAAAGGATCGACATCCCGTCCG
ATCCCCCCTCCCCCCCAACTTCCTTCCGTGGAAGAGCTTACCGCTGGAGT
GCCTGCATTTGCACCGCACCCAACTTTTCCGGCCCCTCGCGAACCTTATA
GATTGGGGCGACCCTTGGATCTGGGTGGTCACAGTAGCCATCTTGGACCC
AACCTCGGTCTTCCCCCTCGAACCCTCCCGTAGAGGGCATGAAGAAAACG
ATGTCTATGCCTGTGTGTTTTGCGTTATTACGATTTGCATAGCGCTGGTT
GGAGGTATATCTTCTTCACTCATGGGAGGCTTGTCATACAAGAGCTCTTC
CGAGTGCGGCACCTTCGAGAGGAGGCCTCAATTTGACGAGCCCAATGCTC
GTATCGTCGTTCCTGTCGTGAGTGCTATGCAGATGTGGATGACGGGCTTC
GAGGCTGGCTCTCGATGAATGATTGCGTTACAAAATCACGCTATCTTACC
TCCTCCCGCCAAAGTGGATATCTCACTGCTGCTGAAGCCCCAGGATGAAG
AGGAAGCCGCCTCGGTGACGACAGCGCCTGGCTACCCACCCAGCGCAATC
CCGCCGCCCTCGGTAGCACCTGCGTTGCCAGTAGCTGCTCCAGCATCGTT
GTCCTCGGTCCCCCCAGTGCCCCAGCTTACGTCTAAAATTCCGGCTACGG
TGCCTGCCAAGCGCCTTCAACCTGCCCACACTGCAGAGTCGCCGGCTAAA
AAGCAATCCAAGTGGTCCCCGGAGGAGGATGCCCTTATCATCGAGCTACG
AGGAAGCGGTATGAAATGGGAGGATATTAGTAAACGGCTTCCTGGCCGAA
GTGCCATCAGTTGCCGTCTACACTATCAGAATTACTTGGAACGCAGAAGT
GAGTGGGATGAGGATAAAAAGAACAAACTTGCAAGGTTATACGAAAGGTT
CAAAGCAGAGATGTGGTCAAAGGTAGCAGAAGAGATGGCCATTCCGTGGA
GGGCTGCAGAAGCCATGCACTGGCAACTGGGAGAACAGGAAATGATCCGC
CAGCGCCCCGAACTCGCAGAGCCAGCACGTCTCTATCTCGACCAAGAAAA
GGATCGACATCCCGTCCGATCCCCCCTCCCCCCCAACTTCCTTCCGTGGA
AGAGCTTACCGCTGGAGTGCCTGCATTTGCACCGCACCCAACTTTTCCGG
CCCCTCGCGAACCTTATAGATTGGGGCGACCCTTGGATCTGGGTGGTCAC
AGTAGCCATCTTGGACCCAACCTCGGTCTTCCCCCTCGAACCCTCCCGTA
GAGGGCATGAAGAAAACGATGTCTATGCCTGTGTGTTTTGCGTTATTACG
ATTTGCATAGCGCTGGTTGGAGGTATATCTTCTTCACTCATGGGAGGCTT
GTCATACAAGAGCTCTTCCGAGTGCGGCACCTTCGAGAGGAGGCCTCAAT
TTGACGAGCCCAATGCTCGTATCGTCGTTCCTGTCGTGAGTGCTATGCAG
ATGTGGATGACGGGCTTCGAGGCTGGCTCTCGATGAATGATTGCGTTACA
AAATCACGCTATCTTACCTCCTCCCGCCAAAGTGGATATCTCACTGCTGC
TGAAGCCCCAGGATGAAGAGGAAGCCGCCTCGGTGACGACAGCGCCTGGC
TACCCACCCAGCGCAATCCCGCCGCCCTCGGTAGCACCTGCGTTGCCAGT
AGCTGCTCCAGCATCGTTGTCCTCGGTCCCCCCAGTGCCCCAGCTTACGT
CTAAAATTCCGGCTACGGTGCCTGCCAAGCGCCTTCAACCTGCCCACACT
GCAGAGTCGCCGGCTAAAAAGCAATCCAAGTGGTCCCCGGAGGAGGATGC
CCTTATCATCGAGCTACGAGGAAGCGGTATGAAATGGGAGGATATTAGTA
AACGGCTTCCTGGCCGAAGTGCCATCAGTTGCCGTCTACACTATCAGAAT
TACTTGGAACGCAGAAGTGAGTGGGATGAGGATAAAAAGAACAAACTTGC
AAGGTTATACGAAAGGTTCAAAGCAGAGATGTGGTCAAAGGTAGCAGAAG
AGATGGCCATTCCGTGGAGGGCTGCAGAAGCCATGCACTGGCAACTGGGA
GAACAGGAAATGATCCGCCAGCGCCCCGAACTCGCAGAGCCAGCACGTCT
CTATCTCGACCAAGAAAAGGATCGACATCCCGTCCGATCCCCCCTCCCCC
CCAACTTCCTTCCGTGGAAGAGCTTACCGCTGGAGTGCCTGCATTTGCAC
CGCACCCAACTTTTCCGGCCCCTCGCGAACCTTATAGATTGGGGCGACCC
TTGGATCTGGGTGGTCACAGTAGCCATCTTGGACCCAACCTCGGTCTTCC
CCCTCGAACCCTCCCGTAGAGGGCATGAAGAAAACGATGTCTATGCCTGT
GTGTTTTGCGTTATTACGATTTGCATAGCGCTGGTTGGAGGTATATCTTC
TTCACTCATGGGAGGCTTGTCATACAAGAGCTCTTCCGAGTGCGGCACCT
TCGAGAGGAGGCCTCAATTTGACGAGCCCAATGCTCGTATCGTCGTTCCT
GTCGTGAGTGCTATGCAGATGTGGATGACGGGCTTCGAGGCTGGCTCTCG
ATGAATGATTGCGTTACAAAATCACGCTATCTTACCTCCTCCCGCCAAAG
TGGATATCTCACTGCTGCTGAAGCCCCAGGATGAAGAGGAAGCCGCCTCG
GTGACGACAGCGCCTGGCTACCCACCCAGCGCAATCCCGCCGCCCTCGGT
AGCACCTGCGTTGCCAGTAGCTGCTCCAGCATCGTTGTCCTCGGTCCCCC
CAGTGCCCCAGCTTACGTCTAAAATTCCGGCTACGGTGCCTGCCAAGCGC
CTTCAACCTGCCCACACTGCAGAGTCGCCGGCTAAAAAGCAATCCAAGTG
GTCCCCGGAGGAGGATGCCCTTATCATCGAGCTACGAGGAAGCGGTATGA
AATGGGAGGATATTAGTAAACGGCTTCCTGGCCGAAGTGCCATCAGTTGC
CGTCTACACTATCAGAATTACTTGGAACGCAGAAGTGAGTGGGATGAGGA
TAAAAAGAACAAACTTGCAAGGTTATACGAAAGGTTCAAAGCAGAGATGT
GGTCAAAGGTAGCAGAAGAGATGGCCATTCCGTGGAGGGCTGCAGAAGCC
ATGCACTGGCAACTGGGAGAACAGGAAATGATCCGCCAGCGCCCCGAACT
CGCAGAGCCAGCACGTCTCTATCTCGACCAAGAAAAGGATCGACATCCCG
TCCGATCCCCCCTCCCCCCCAACTTCCTTCCGTGGAAGAGCTTACCGCTG
GAGTGCCTGCATTTGCACCGCACCCAACTTTTCCGGCCCCTCGCGAACCT
TATAGATTGGGGCGACCCTTGGATCTGGGTGGTCACAGTAGCCATCTTGG
ACCCAACCTCGGTCTTCCCCCTCGAACCCTCCCGTAGAGGGCATGAAGAA
AACGATGTCTATGCCTGTGTGTTTTGCGTTATTACGATTTGCATAGCGCT
GGTTGGAGGTATATCTTCTTCACTCATGGGAGGCTTGTCATACAAGAGCT
CTTCCGAGTGCGGCACCTTCGAGAGGAGGCCTCAATTTGACGAGCCCAAT
GCTCGTATCGTCGTTCCTGTCGTGAGTGCTATGCAGATGTGGATGACGGG
CTTCGAGGCTGGCTCTCGATGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_005351KJC3_005351Aspergillus niger KJC3gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005351-T1.exon1KJC3_005351-T1.exon1Aspergillus niger KJC3exon
KJC3_005351-T1.exon2KJC3_005351-T1.exon2Aspergillus niger KJC3exon
KJC3_005351-T1.exon3KJC3_005351-T1.exon3Aspergillus niger KJC3exon
KJC3_005351-T1.exon4KJC3_005351-T1.exon4Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005351-T1.cdsKJC3_005351-T1.cdsAspergillus niger KJC3CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005351-T1KJC3_005351-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR009057
DBxrefInterPro:IPR017877
DBxrefInterPro:IPR017930
DBxrefInterPro:IPR001005
DBxrefPFAM:PF00249
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch4supercontigch4:2395129..2396370 +
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