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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:2402439..2405395- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_005356-T1 ID=KJC3_005356-T1|Name=KJC3_005356-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2957bp|location=Sequence derived from alignment at ch4:2402439..2405395- (Aspergillus niger KJC3)
ATAAAGTGGTTCTCCCAGCCCAGCTGACACGACTGGGAACGCTTGTTGGG
ACCTAGAGTCATTTCTTTGCCTGACACTTCTTGATACTGAAAACATCAAG
CTTACCCCTATCTTTGCATGGTTTTCGCTTGAATATGGAATCCTCATGGC
GTGCCCAAAATCCGATACCTGCCGCACTGTTGCAACCCTCCAAGTGGCTC
CCACTGTACGAGGAGTTCGTGACGAAGAATGCTAGCTCTGTGAGCCAAGT
AGAGTCCGCGTTGAGGTCTCTAACATACATCATCCCGGGTTAGTGCATGA
AGCTTGAAGTACAGGAATTTGGTCGAGGAAATGAAAGGCTGAAACCGTGT
GCAGGGAGATACCGAGATTCGGAGATAAGCTCAGAGTGCGGTACGTTATT
CAAGTGTTTCTAATGGTGATCTTCTAGACAAGGAAGCCATTCGCTTGATT
CTGACTTCTGTGAAAAGTGCATTCAGGGGTACAGCTTCTGTCACTCTACC
ATGACTCTCTGGTTTCGCGAGTCATTTCTAGGTTACCGTCAACAATCCCG
CGGCCTACACCATCACCTCATGCGCGCTACACGAAGTATTGGACCTCCCA
CTCTTCACTGTATCAGAGAATCGCCCTCGCATTACAGATGATCCAATATA
CAGAACTGCTGTGGGAGATGGCGGCTCGGCGTCGTGGTGAGAAGGTGCGC
TGGCGTGTCGTCGTATTAATCGAAGCCGCTAAGGCGATCTGTCGCCTGTT
ACTCCTTCGTCTCACCAACTCTAGACCATTGGTCAGCCCTCCACTTCCTG
AGCGGGAAGTAGATCCCAGATCGCTGGAAGAAGAGGACAGTAGCGACTGG
AATGGCATGCAGACCCCTATTAGCGAACGGTCGTCGGATCTGTGCTGGAC
TATGCCTCGCACAGGGCTGTCGCTTCCTTCTCTGCCTAATGTGGATGACC
TTTCAAACTACTTGATATCCAAAGTTCTTACGGCCGACGATATCAAGCCA
CCGAAAATGCTGTTGCACCGAGTCACTGGCCAGGGCCAGTTTGCTGAGAT
TCTATACATCCTCCGACCAGTAGTTTATGCGCTCATGCTGCAACGATACT
GCAAAGACAGGCGGAGTTGGAAACCCTGGCTTATCGGTTTTGGCATGGAG
TATGGCTGTCGACAACTAGCCAAAGCTGATCTTCGCGAAAGAGTCGCAGG
CGGCCTTCGGGGATTGACCGGGCTGGAGCGGGAGGAACTAAGGAAGAGAG
GCTGGGCGATGGGTTGGTGGTTTATGCGCGGGGCTTTCTATGAGAATATT
ACCAAGTATGGCACTCTAGCCCTTCCCAAACTACTGATAAGGAGTTAAAG
TATTGTACTAACTTTTACATAGATCCTGGTTGAAAGGGTTGACCGGCAAA
ATGAGGGGCAAACCTCTGCTTGATTTGGTAGGCAGTGTCATTGAGGATTA
CGAGTATCTCTGGGACAACTACTACTTCTCGACTACAACACTGTGATGTT
CGCTGTGTCCTGCCAGCGTCAGATGTTTCTGCCATCTTTGCTAGCATTTT
GCTTTACCTCGGAAGCCTCCTGTGCCTCACACAGCCGTCTTCTCGTACCT
AATTTAGATACCCAATGACTTATCATCCCCAAGCTATCCCTTTTAATGTT
ACGAAACGCTATATTCTGTCTGTTTCAACTTGCACATTAGTGCAAAATGA
CACATCAGGCTCATATGCTTCCACTGAATTCAAGGGCATTCACACTGCAA
AAGAAAGTGGGTATCATTTGGTCATTATTCCGTCAACTCTGCATCTGCGC
TTGATAAAGGATAAACTCATGTTTGGCTAAGAGAGGACCTCTGTGGACCT
TGCCCCGTACCATTCCAGCAACTCATGCTGAGCTTTTGTAGTGTTACTGG
TCGAAGATAAGAGGAAGTCCCTGAGCTGCGTATTTTCTTCTTCTCCAGGC
CAATCGACCTTTGGCCTTCCCTTCAACTCGAGCAACTCTTTTGCGGTGCC
CCAACTGAATCGGCATTCGTTGCCCCATCCGAAAATCGGATCCATGTTTT
TCTTTAACCAATTGGCACACTTTGAATCAGAGGGATAGCCGCTTCCCCAA
CTCTGCGGCACCACCGCCCTCGGTGAATCTTCCGCATGGGTGTCTTCGTA
TATAGCTTGATGACAGAGATCTAATGCGACGTCTCTGGTGACTTTGGCAG
CAACACTTGCAGCACTCACGCACGGATATAACGAGTCGGCCTTCTTCGCC
ACGGTGATTCTGAGTGATGGAAATATCTTCTCGAGTTTCTGTTGGTAGGT
TGCGGGGTTTCCAATCGTATCGATGTAGACCTCTCGCACGTCCATGTTGC
GATCTTCAATGATTCCACGGATGAGTTCAATGGTAGCATCCATTGCTTGC
GCATTCAGGTTATAAGCTCCCGTTCCAGGCCGCATCATACCGGACGAGAT
GTCACGCGCTGATAGTAGCTTCACGGCCCATCCGCAGGATTCGTGTAAGG
GATTTCCCGGGGTACATAGTAGCTTCATGAGATTAGCGCGTACGCCGGGA
GTGAGGACTTTGCTGTCGTTGAAGCTGTAGTCACGAGTCAAGAGAGTATG
GTGCAGATCTTGGGGCAAGTAGAAGGCGCTGTAGACCATGGGGCCTAGAA
CTGGACCGCGTCCGGCCTCGTCTACACCCAAGATAAGGTAATTTGGTGAA
GAGTTCGTAGTAGGTTCATTAACTTTGGAGGTTGCAATGACGGGAGGACA
GGGTGAATAGTAAGAATAGGACTCCCCGGCGAAAAGCCGAGAGTGATCTA
TACTTGGAGGGATGAAGAGGCCTGTTGCAGTAGTGGGAGACTCCCCCTGG
AGAGGGGCAGTGGAGATGCCTGCAGATTCGCCCATACTTCTGTTGATTTC
AGACGGGAGTTGTGATCACGACAAGCGAGAAAAGGAAGGAAGGGTGTAGT
CGGGGAG back to topCoding sequence (CDS) from alignment at ch4:2402439..2405395- >KJC3_005356-T1 ID=KJC3_005356-T1|Name=KJC3_005356-T1|organism=Aspergillus niger KJC3|type=CDS|length=4608bp|location=Sequence derived from alignment at ch4:2402439..2405395- (Aspergillus niger KJC3)
ATCCTGGTTGAAAGGGTTGACCGGCAAAATGAGGGGCAAACCTCTGCTTG
ATTTGGTAGGCAGTGTCATTGAGGATTACGAGTATCTCTGGGACAACTAC
TACTTCTCGACTACAACACTGTGATGCATTCAGGGGTACAGCTTCTGTCA
CTCTACCATGACTCTCTGGTTTCGCGAGTCATTTCTAGGTTACCGTCAAC
AATCCCGCGGCCTACACCATCACCTCATGCGCGCTACACGAAGTATTGGA
CCTCCCACTCTTCACTGTATCAGAGAATCGCCCTCGCATTACAGATGATC
CAATATACAGAACTGCTGTGGGAGATGGCGGCTCGGCGTCGTGGTGAGAA
GGTGCGCTGGCGTGTCGTCGTATTAATCGAAGCCGCTAAGGCGATCTGTC
GCCTGTTACTCCTTCGTCTCACCAACTCTAGACCATTGGTCAGCCCTCCA
CTTCCTGAGCGGGAAGTAGATCCCAGATCGCTGGAAGAAGAGGACAGTAG
CGACTGGAATGGCATGCAGACCCCTATTAGCGAACGGTCGTCGGATCTGT
GCTGGACTATGCCTCGCACAGGGCTGTCGCTTCCTTCTCTGCCTAATGTG
GATGACCTTTCAAACTACTTGATATCCAAAGTTCTTACGGCCGACGATAT
CAAGCCACCGAAAATGCTGTTGCACCGAGTCACTGGCCAGGGCCAGTTTG
CTGAGATTCTATACATCCTCCGACCAGTAGTTTATGCGCTCATGCTGCAA
CGATACTGCAAAGACAGGCGGAGTTGGAAACCCTGGCTTATCGGTTTTGG
CATGGAGTATGGCTGTCGACAACTAGCCAAAGCTGATCTTCGCGAAAGAG
TCGCAGGCGGCCTTCGGGGATTGACCGGGCTGGAGCGGGAGGAACTAAGG
AAGAGAGGCTGGGCGATGGGTTGGTGGTTTATGCGCGGGGCTTTCTATGA
GAATATTACCAAGGAGATACCGAGATTCGGAGATAAGCTCAGAGTGCGAT
GGAATCCTCATGGCGTGCCCAAAATCCGATACCTGCCGCACTGTTGCAAC
CCTCCAAGTGGCTCCCACTGTACGAGGAGTTCGTGACGAAGAATGCTAGC
TCTGTGAGCCAAGTAGAGTCCGCGTTGAGGTCTCTAACATACATCATCCC
GGATCCTGGTTGAAAGGGTTGACCGGCAAAATGAGGGGCAAACCTCTGCT
TGATTTGGTAGGCAGTGTCATTGAGGATTACGAGTATCTCTGGGACAACT
ACTACTTCTCGACTACAACACTGTGATGCATTCAGGGGTACAGCTTCTGT
CACTCTACCATGACTCTCTGGTTTCGCGAGTCATTTCTAGGTTACCGTCA
ACAATCCCGCGGCCTACACCATCACCTCATGCGCGCTACACGAAGTATTG
GACCTCCCACTCTTCACTGTATCAGAGAATCGCCCTCGCATTACAGATGA
TCCAATATACAGAACTGCTGTGGGAGATGGCGGCTCGGCGTCGTGGTGAG
AAGGTGCGCTGGCGTGTCGTCGTATTAATCGAAGCCGCTAAGGCGATCTG
TCGCCTGTTACTCCTTCGTCTCACCAACTCTAGACCATTGGTCAGCCCTC
CACTTCCTGAGCGGGAAGTAGATCCCAGATCGCTGGAAGAAGAGGACAGT
AGCGACTGGAATGGCATGCAGACCCCTATTAGCGAACGGTCGTCGGATCT
GTGCTGGACTATGCCTCGCACAGGGCTGTCGCTTCCTTCTCTGCCTAATG
TGGATGACCTTTCAAACTACTTGATATCCAAAGTTCTTACGGCCGACGAT
ATCAAGCCACCGAAAATGCTGTTGCACCGAGTCACTGGCCAGGGCCAGTT
TGCTGAGATTCTATACATCCTCCGACCAGTAGTTTATGCGCTCATGCTGC
AACGATACTGCAAAGACAGGCGGAGTTGGAAACCCTGGCTTATCGGTTTT
GGCATGGAGTATGGCTGTCGACAACTAGCCAAAGCTGATCTTCGCGAAAG
AGTCGCAGGCGGCCTTCGGGGATTGACCGGGCTGGAGCGGGAGGAACTAA
GGAAGAGAGGCTGGGCGATGGGTTGGTGGTTTATGCGCGGGGCTTTCTAT
GAGAATATTACCAAGGAGATACCGAGATTCGGAGATAAGCTCAGAGTGCG
ATGGAATCCTCATGGCGTGCCCAAAATCCGATACCTGCCGCACTGTTGCA
ACCCTCCAAGTGGCTCCCACTGTACGAGGAGTTCGTGACGAAGAATGCTA
GCTCTGTGAGCCAAGTAGAGTCCGCGTTGAGGTCTCTAACATACATCATC
CCGGATCCTGGTTGAAAGGGTTGACCGGCAAAATGAGGGGCAAACCTCTG
CTTGATTTGGTAGGCAGTGTCATTGAGGATTACGAGTATCTCTGGGACAA
CTACTACTTCTCGACTACAACACTGTGATGCATTCAGGGGTACAGCTTCT
GTCACTCTACCATGACTCTCTGGTTTCGCGAGTCATTTCTAGGTTACCGT
CAACAATCCCGCGGCCTACACCATCACCTCATGCGCGCTACACGAAGTAT
TGGACCTCCCACTCTTCACTGTATCAGAGAATCGCCCTCGCATTACAGAT
GATCCAATATACAGAACTGCTGTGGGAGATGGCGGCTCGGCGTCGTGGTG
AGAAGGTGCGCTGGCGTGTCGTCGTATTAATCGAAGCCGCTAAGGCGATC
TGTCGCCTGTTACTCCTTCGTCTCACCAACTCTAGACCATTGGTCAGCCC
TCCACTTCCTGAGCGGGAAGTAGATCCCAGATCGCTGGAAGAAGAGGACA
GTAGCGACTGGAATGGCATGCAGACCCCTATTAGCGAACGGTCGTCGGAT
CTGTGCTGGACTATGCCTCGCACAGGGCTGTCGCTTCCTTCTCTGCCTAA
TGTGGATGACCTTTCAAACTACTTGATATCCAAAGTTCTTACGGCCGACG
ATATCAAGCCACCGAAAATGCTGTTGCACCGAGTCACTGGCCAGGGCCAG
TTTGCTGAGATTCTATACATCCTCCGACCAGTAGTTTATGCGCTCATGCT
GCAACGATACTGCAAAGACAGGCGGAGTTGGAAACCCTGGCTTATCGGTT
TTGGCATGGAGTATGGCTGTCGACAACTAGCCAAAGCTGATCTTCGCGAA
AGAGTCGCAGGCGGCCTTCGGGGATTGACCGGGCTGGAGCGGGAGGAACT
AAGGAAGAGAGGCTGGGCGATGGGTTGGTGGTTTATGCGCGGGGCTTTCT
ATGAGAATATTACCAAGGAGATACCGAGATTCGGAGATAAGCTCAGAGTG
CGATGGAATCCTCATGGCGTGCCCAAAATCCGATACCTGCCGCACTGTTG
CAACCCTCCAAGTGGCTCCCACTGTACGAGGAGTTCGTGACGAAGAATGC
TAGCTCTGTGAGCCAAGTAGAGTCCGCGTTGAGGTCTCTAACATACATCA
TCCCGGATCCTGGTTGAAAGGGTTGACCGGCAAAATGAGGGGCAAACCTC
TGCTTGATTTGGTAGGCAGTGTCATTGAGGATTACGAGTATCTCTGGGAC
AACTACTACTTCTCGACTACAACACTGTGATGCATTCAGGGGTACAGCTT
CTGTCACTCTACCATGACTCTCTGGTTTCGCGAGTCATTTCTAGGTTACC
GTCAACAATCCCGCGGCCTACACCATCACCTCATGCGCGCTACACGAAGT
ATTGGACCTCCCACTCTTCACTGTATCAGAGAATCGCCCTCGCATTACAG
ATGATCCAATATACAGAACTGCTGTGGGAGATGGCGGCTCGGCGTCGTGG
TGAGAAGGTGCGCTGGCGTGTCGTCGTATTAATCGAAGCCGCTAAGGCGA
TCTGTCGCCTGTTACTCCTTCGTCTCACCAACTCTAGACCATTGGTCAGC
CCTCCACTTCCTGAGCGGGAAGTAGATCCCAGATCGCTGGAAGAAGAGGA
CAGTAGCGACTGGAATGGCATGCAGACCCCTATTAGCGAACGGTCGTCGG
ATCTGTGCTGGACTATGCCTCGCACAGGGCTGTCGCTTCCTTCTCTGCCT
AATGTGGATGACCTTTCAAACTACTTGATATCCAAAGTTCTTACGGCCGA
CGATATCAAGCCACCGAAAATGCTGTTGCACCGAGTCACTGGCCAGGGCC
AGTTTGCTGAGATTCTATACATCCTCCGACCAGTAGTTTATGCGCTCATG
CTGCAACGATACTGCAAAGACAGGCGGAGTTGGAAACCCTGGCTTATCGG
TTTTGGCATGGAGTATGGCTGTCGACAACTAGCCAAAGCTGATCTTCGCG
AAAGAGTCGCAGGCGGCCTTCGGGGATTGACCGGGCTGGAGCGGGAGGAA
CTAAGGAAGAGAGGCTGGGCGATGGGTTGGTGGTTTATGCGCGGGGCTTT
CTATGAGAATATTACCAAGGAGATACCGAGATTCGGAGATAAGCTCAGAG
TGCGATGGAATCCTCATGGCGTGCCCAAAATCCGATACCTGCCGCACTGT
TGCAACCCTCCAAGTGGCTCCCACTGTACGAGGAGTTCGTGACGAAGAAT
GCTAGCTCTGTGAGCCAAGTAGAGTCCGCGTTGAGGTCTCTAACATACAT
CATCCCGG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_005356-T1.utr3p1 | KJC3_005356-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_005356-T1.utr5p1 | KJC3_005356-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR013919 |
| DBxref | PFAM:PF08610 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch4 | supercontig | ch4:2402439..2405395 - |
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