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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:2420686..2423973- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_005363-T1 ID=KJC3_005363-T1|Name=KJC3_005363-T1|organism=Aspergillus niger KJC3|type=mRNA|length=3288bp|location=Sequence derived from alignment at ch4:2420686..2423973- (Aspergillus niger KJC3)
ATCTATCTAAGCTACCGATTTGTATGGTCAAGCCACACATATATTGACTG
CAAGGAAGATTCCAACCCAACCCCTTGTTTTTGGGGCATGGTCTGAAGTA
CTCCAGTTTCCTGCTCCGCACACCGAGAACATTCGTACTGGGCGCATTCT
GCAGTCCAAGCAAGTTAAACCAACCAAGACGAATGGCATGGATGCTGAGT
CATCTATCATCATGACCTTGCCTGATGACGCTTGCAACCTCACCTACTGA
TCGCAAGGGAAAACTACTTCCTTCGTACGCATTCTGCCTGTCTGAACTCT
TCCTGCAGTTTATATCCCAATCCGTCATCTATTTTCTTCTTGATGGATAA
CCCTGTCCCATCTGGCTTCTTTGCTATGTAGTCCTTCGATTCCCACTCCG
ACTGAGTTTCAACTGCATCGGGCTTATACCGCTCACACCGCTTCGTCTGC
CATAATCTGGACAACCAGTGATTTGAGTATAAGAAGTTTAGCGGCTCATT
GGTCAAGGGCCAAGGTGTCAAAGAGAAGAGAACGAAGATAGAGAACCAGG
TCAGACATGTTCTCCGAATGTATGATTATCACTCTGCTGTCCGTCTCTTA
TAAATTGACCAAGCTTTTCATCGCTCACTGTCTGCCCAGATGCCTCCCGT
TTCCTCGCACAGTCCCAGTCACGGGTTGTGAACCATCCAGAAGACCCCCG
AAGAAAGGGACATGAACGTCTCTTGCAACAACCTCGGAATTCTCTTTTGC
CCTCCTCGCGCTCATTCTTCCACAGGAATGCGGCCGACCCATATCAACCT
GCCGGTTCTCAACTATCAAGCTTCCCTTTTAGTTCGAGGGTTGTGTCTCA
GCCTGCGCCTCTCTTCTACAGCGCTACTGACGAATTTCGAGAGGAGGATG
ATGAGGTTGAGCATGAGCGAGAGATTGCCGACTTCTATGCCTTACAAAAA
TCACGGCGTCAATTTGGGAGCAGCTACCTTAGGGAGTCTTCAGAGATTGG
CGACGATAACGACTCTGCCAGCTCGAAGGAACAAAAGCCTCCCTATACTA
GGGGGAAGGGCATTTGGAGCTCCTGGCGCGACGCCGAAACTAGCGACAGA
GCGCAAGAGTTGCGTGCTGAATACGACGGGGAGCCACGCGGAACGGGAGA
TTCGGTTCAAGCAGAGCGAAACAGAAGCAGGCTCAGGGGAAACCTAGTTG
ACGTTCAACTGGAAGATACACTGGCATCCGATGTTGGCCGCGACCGGGCT
GACTCTCCCGTATTTGGTGATGATAAACCGCCCTCCATTCAACGGTTTCG
AGAGCAGCCACAGTCACGAACGGGCAATCTCGGAATAGACTCAGTCCTCT
TGCCTATAGATTCAGATAACGCAGTATTGCCAGAAACATCCCAACCGCCA
GGCATGTCACGGCCATACCGAATGTCGACTCCACCGATAGGCGCTAGCTC
TCCAACTCATGATGCCTTCTGGGGTCAGTTATTTCTCATATCCGTGGCCT
CTCTCTTCGCTACGTCATTTCTTGTCTACCTCCACACTTCACCTCCTTCT
GGTGACAAGTCGAAATGGGGTGACACGGTCTACTTGACCATCCACAGTTC
ATTTTACCTGCTGGGTACCTATACTGTCGCGTCGATATTCATATCTCTGC
TCTGGCTGGCATTATTACGTTCCTACGTACGTCCATTGGTCTACGCTGTC
ATCATCGCCGTTCCCATAATCCTGTATTCCTTCTTTCTCTACCCCTTTAT
CTCGAGTTTTGGAGGTACGTGGCACGGATCGAGTGTTCAGGACAAAGTCA
TGAGATGCGGGTCTATTGTTCCGTTTGTTTTGGCCAGTGCATGGATTTAT
AATGTCGTTCGAGGTCGCCACGCTATAGGGAGGGCCGTCGACATACTCGA
ATTTGCATGCCGCATCCTCGCCGTGAATCCAGAGCTTCTAGCTTTGGGGC
TTGGTGCCCTCGTTCTCATTGTCTTATGGACCTGGCTATGGATGCTCATA
TTTACGCGAGTGTTTTTGGAAGGTCATCTTTCTCGGTCCAGCCTTTTTGT
TGTCGATTCAAGCGGCTGGTGCTTAGGAGTCTACTATGTGCTCGTTTACG
CATGGTCACTGGGAGTCATCGCTGGTATTCGACGTACAGTCACAGCTGCC
GCCGTGAGCCAGTGGTATTTTCACCGCTATACGATGCCGGCGCCGACGTC
CAGGCAAATAGTCCAGGCCGCAACTCTGCACTCCGTTACAACCCTTTTTG
GTACAATTTGCCTATCGAGCCTCCTGGCTTTAATGATCCGCGTCCCGCTT
TTGTTGCTTCCCGGTCGCATCGCCTCCCTTTTGAGTTTCTGCGCCTATTC
GTTTGTCCCAACTCCTATAACTGCCCTTACGGACCCTCTTACCCTCACAT
ATGCTTCCATTCATTCCCAGCCGCTTACAGTGTCCGCTCGTGGCCTGGTG
CAGATGACAAACCTGACGCCCTCCATAGCGACGACTTCTTTACACCCACG
GTCGTTCTCTTGGTCTCGTGAGCATTCTGGAGCTCTTCTCCCTTACCGAC
TTTCCAAGCTCATCCTGCATGCTGCTCGTCTCATGATGTCTCTTGCGCTT
GGGTTTGGTGGCTGGGTGAGCACTGCCCGGAGCCTAAGTGTGATGGGTAC
CAACGGTTCAATCCGTGGAAGCATGTATGCCTATATGGTTGGGTTCATTG
CTGGGACGATTGGTTGGAGTGTGTTGGGAGCAATTGAAGGTGTGATTGCA
GATATTGTCGATGCATCAATCATTTGTTGGAGTAGCGAAGTTGGAGCCTA
CGGGCGAGAGGCAAGGTACTGTCGGGAAGCTGGCTGGCTCTTCGGCCAAG
AGTCTGGTTCTGTTTCCAGGAATACGCGCTTTGAGGATGCATGAGTTATT
ACTTCTTAGCAGGTACCTGTGCGACCATGAAGCGAAGGTAAGATACTCAT
TGAGAGAACATCTACCGCTTAGTACTCGCCGCCCTGTCGATGCTGAGCTC
GATAGGATTTTCGATGACTTGAAATCTGATGTTGGTTTTGCGCTTCGGGG
ATTTTGAGAGGTTTCGGCTTAGCGATTGTGTTTATTCCTTATCACTATGT
CTACGGGAGACATCTGCTAAATGAACGACTTATGCCAGGTATCGTATCTA
GATCGTTATTAGACCCTCTATTTTATTTGACTCTTTTCCATTCCTTGGCG
TATTAACCTACAGGCCCAAGTGCCCGGGTCTCAACTTCTAAGTTTGAATG
GCATGGATGTACGCGAGATGATATAGCATGCAATCGAT back to topCoding sequence (CDS) from alignment at ch4:2420686..2423973- >KJC3_005363-T1 ID=KJC3_005363-T1|Name=KJC3_005363-T1|organism=Aspergillus niger KJC3|type=CDS|length=4536bp|location=Sequence derived from alignment at ch4:2420686..2423973- (Aspergillus niger KJC3)
ATGCCTCCCGTTTCCTCGCACAGTCCCAGTCACGGGTTGTGAACCATCCA
GAAGACCCCCGAAGAAAGGGACATGAACGTCTCTTGCAACAACCTCGGAA
TTCTCTTTTGCCCTCCTCGCGCTCATTCTTCCACAGGAATGCGGCCGACC
CATATCAACCTGCCGGTTCTCAACTATCAAGCTTCCCTTTTAGTTCGAGG
GTTGTGTCTCAGCCTGCGCCTCTCTTCTACAGCGCTACTGACGAATTTCG
AGAGGAGGATGATGAGGTTGAGCATGAGCGAGAGATTGCCGACTTCTATG
CCTTACAAAAATCACGGCGTCAATTTGGGAGCAGCTACCTTAGGGAGTCT
TCAGAGATTGGCGACGATAACGACTCTGCCAGCTCGAAGGAACAAAAGCC
TCCCTATACTAGGGGGAAGGGCATTTGGAGCTCCTGGCGCGACGCCGAAA
CTAGCGACAGAGCGCAAGAGTTGCGTGCTGAATACGACGGGGAGCCACGC
GGAACGGGAGATTCGGTTCAAGCAGAGCGAAACAGAAGCAGGCTCAGGGG
AAACCTAGTTGACGTTCAACTGGAAGATACACTGGCATCCGATGTTGGCC
GCGACCGGGCTGACTCTCCCGTATTTGGTGATGATAAACCGCCCTCCATT
CAACGGTTTCGAGAGCAGCCACAGTCACGAACGGGCAATCTCGGAATAGA
CTCAGTCCTCTTGCCTATAGATTCAGATAACGCAGTATTGCCAGAAACAT
CCCAACCGCCAGGCATGTCACGGCCATACCGAATGTCGACTCCACCGATA
GGCGCTAGCTCTCCAACTCATGATGCCTTCTGGGGTCAGTTATTTCTCAT
ATCCGTGGCCTCTCTCTTCGCTACGTCATTTCTTGTCTACCTCCACACTT
CACCTCCTTCTGGTGACAAGTCGAAATGGGGTGACACGGTCTACTTGACC
ATCCACAGTTCATTTTACCTGCTGGGTACCTATACTGTCGCGTCGATATT
CATATCTCTGCTCTGGCTGGCATTATTACGTTCCTACGTACGTCCATTGG
TCTACGCTGTCATCATCGCCGTTCCCATAATCCTGTATTCCTTCTTTCTC
TACCCCTTTATCTCGAGTTTTGGAGGTACGTGGCACGGATCGAGTGTTCA
GGACAAAGTCATGAGATGCGGGTCTATTGTTCCGTTTGTTTTGGCCAGTG
CATGGATTTATAATGTCGTTCGAGGTCGCCACGCTATAGGGAGGGCCGTC
GACATACTCGAATTTGCATGCCGCATCCTCGCCGTGAATCCAGAGCTTCT
AGCTTTGGGGCTTGGTGCCCTCGTTCTCATTGTCTTATGGACCTGGCTAT
GGATGCTCATATTTACGCGAGTGTTTTTGGAAGGTCATCTTTCTCGGTCC
AGCCTTTTTGTTGTCGATTCAAGCGGCTGGTGCTTAGGAGTCTACTATGT
GCTCGTTTACGCATGGTCACTGGGAGTCATCGCTGGTATTCGACGTACAG
TCACAGCTGCCGCCGTGAGCCAGTGGTATTTTCACCGCTATACGATGCCG
GCGCCGACGTCCAGGCAAATAGTCCAGGCCGCAACTCTGCACTCCGTTAC
AACCCTTTTTGGTACAATTTGCCTATCGAGCCTCCTGGCTTTAATGATCC
GCGTCCCGCTTTTGTTGCTTCCCGGTCGCATCGCCTCCCTTTTGAGTTTC
TGCGCCTATTCGTTTGTCCCAACTCCTATAACTGCCCTTACGGACCCTCT
TACCCTCACATATGCTTCCATTCATTCCCAGCCGCTTACAGTGTCCGCTC
GTGGCCTGGTGCAGATGACAAACCTGACGCCCTCCATAGCGACGACTTCT
TTACACCCACGGTCGTTCTCTTGGTCTCGTGAGCATTCTGGAGCTCTTCT
CCCTTACCGACTTTCCAAGCTCATCCTGCATGCTGCTCGTCTCATGATGT
CTCTTGCGCTTGGGTTTGGTGGCTGGGTGAGCACTGCCCGGAGCCTAAGT
GTGATGGGTACCAACGGTTCAATCCGTGGAAGCATGTATGCCTATATGGT
TGGGTTCATTGCTGGGACGATTGGTTGGAGTGTGTTGGGAGCAATTGAAG
GTGTGATTGCAGATATTGTCGATGCATCAATCATTTGTTGGAGTAGCGAA
GTTGGAGCCTACGGGCGAGAGGCAAGGTACTGTCGGGAAGCTGGCTGGCT
CTTCGGCCAAGAGTCTGGTTCTGTTTCCAGGAATACGCGCTTTGAGGATG
CATGAATGTTCTCCGAATATGCCTCCCGTTTCCTCGCACAGTCCCAGTCA
CGGGTTGTGAACCATCCAGAAGACCCCCGAAGAAAGGGACATGAACGTCT
CTTGCAACAACCTCGGAATTCTCTTTTGCCCTCCTCGCGCTCATTCTTCC
ACAGGAATGCGGCCGACCCATATCAACCTGCCGGTTCTCAACTATCAAGC
TTCCCTTTTAGTTCGAGGGTTGTGTCTCAGCCTGCGCCTCTCTTCTACAG
CGCTACTGACGAATTTCGAGAGGAGGATGATGAGGTTGAGCATGAGCGAG
AGATTGCCGACTTCTATGCCTTACAAAAATCACGGCGTCAATTTGGGAGC
AGCTACCTTAGGGAGTCTTCAGAGATTGGCGACGATAACGACTCTGCCAG
CTCGAAGGAACAAAAGCCTCCCTATACTAGGGGGAAGGGCATTTGGAGCT
CCTGGCGCGACGCCGAAACTAGCGACAGAGCGCAAGAGTTGCGTGCTGAA
TACGACGGGGAGCCACGCGGAACGGGAGATTCGGTTCAAGCAGAGCGAAA
CAGAAGCAGGCTCAGGGGAAACCTAGTTGACGTTCAACTGGAAGATACAC
TGGCATCCGATGTTGGCCGCGACCGGGCTGACTCTCCCGTATTTGGTGAT
GATAAACCGCCCTCCATTCAACGGTTTCGAGAGCAGCCACAGTCACGAAC
GGGCAATCTCGGAATAGACTCAGTCCTCTTGCCTATAGATTCAGATAACG
CAGTATTGCCAGAAACATCCCAACCGCCAGGCATGTCACGGCCATACCGA
ATGTCGACTCCACCGATAGGCGCTAGCTCTCCAACTCATGATGCCTTCTG
GGGTCAGTTATTTCTCATATCCGTGGCCTCTCTCTTCGCTACGTCATTTC
TTGTCTACCTCCACACTTCACCTCCTTCTGGTGACAAGTCGAAATGGGGT
GACACGGTCTACTTGACCATCCACAGTTCATTTTACCTGCTGGGTACCTA
TACTGTCGCGTCGATATTCATATCTCTGCTCTGGCTGGCATTATTACGTT
CCTACGTACGTCCATTGGTCTACGCTGTCATCATCGCCGTTCCCATAATC
CTGTATTCCTTCTTTCTCTACCCCTTTATCTCGAGTTTTGGAGGTACGTG
GCACGGATCGAGTGTTCAGGACAAAGTCATGAGATGCGGGTCTATTGTTC
CGTTTGTTTTGGCCAGTGCATGGATTTATAATGTCGTTCGAGGTCGCCAC
GCTATAGGGAGGGCCGTCGACATACTCGAATTTGCATGCCGCATCCTCGC
CGTGAATCCAGAGCTTCTAGCTTTGGGGCTTGGTGCCCTCGTTCTCATTG
TCTTATGGACCTGGCTATGGATGCTCATATTTACGCGAGTGTTTTTGGAA
GGTCATCTTTCTCGGTCCAGCCTTTTTGTTGTCGATTCAAGCGGCTGGTG
CTTAGGAGTCTACTATGTGCTCGTTTACGCATGGTCACTGGGAGTCATCG
CTGGTATTCGACGTACAGTCACAGCTGCCGCCGTGAGCCAGTGGTATTTT
CACCGCTATACGATGCCGGCGCCGACGTCCAGGCAAATAGTCCAGGCCGC
AACTCTGCACTCCGTTACAACCCTTTTTGGTACAATTTGCCTATCGAGCC
TCCTGGCTTTAATGATCCGCGTCCCGCTTTTGTTGCTTCCCGGTCGCATC
GCCTCCCTTTTGAGTTTCTGCGCCTATTCGTTTGTCCCAACTCCTATAAC
TGCCCTTACGGACCCTCTTACCCTCACATATGCTTCCATTCATTCCCAGC
CGCTTACAGTGTCCGCTCGTGGCCTGGTGCAGATGACAAACCTGACGCCC
TCCATAGCGACGACTTCTTTACACCCACGGTCGTTCTCTTGGTCTCGTGA
GCATTCTGGAGCTCTTCTCCCTTACCGACTTTCCAAGCTCATCCTGCATG
CTGCTCGTCTCATGATGTCTCTTGCGCTTGGGTTTGGTGGCTGGGTGAGC
ACTGCCCGGAGCCTAAGTGTGATGGGTACCAACGGTTCAATCCGTGGAAG
CATGTATGCCTATATGGTTGGGTTCATTGCTGGGACGATTGGTTGGAGTG
TGTTGGGAGCAATTGAAGGTGTGATTGCAGATATTGTCGATGCATCAATC
ATTTGTTGGAGTAGCGAAGTTGGAGCCTACGGGCGAGAGGCAAGGTACTG
TCGGGAAGCTGGCTGGCTCTTCGGCCAAGAGTCTGGTTCTGTTTCCAGGA
ATACGCGCTTTGAGGATGCATGAATGTTCTCCGAAT back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_005363-T1.utr3p1 | KJC3_005363-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR007603 |
| DBxref | PFAM:PF04515 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch4 | supercontig | ch4:2420686..2423973 - |
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