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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:2434435..2436305- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_005367-T1 ID=KJC3_005367-T1|Name=KJC3_005367-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1871bp|location=Sequence derived from alignment at ch4:2434435..2436305- (Aspergillus niger KJC3)
CGTGAGCGATTCACTTATAGCTCCTCATATGAAGCTGTCATTAGTCACCA
TCTGTTTTCGTCATAGCTGTCCTCACCATACGAGTTAGCCCTCATTCAGT
GTACAATGTGCCTCTAGTTAGGAACTTTTTCATGGAACCTTGCAGAGCGG
GCTGGCAATGTTGTTGAAATAAGCGCTATGCTTATGTTTGTATCACTGAT
AAACTATCATCTCTAATGCTTTCTCACACGCCTCAGCATGGCCACTACTC
AGACATTACCCACATTTGACCATACCTCGAGCTTGGATTCGGGGAACTCG
TCACGCAGAAATCCGCGACAGAATGCAGCCACTGGTGCCTCTGCTGCGGG
AGTGCGTGCTCTTAGTGCACAACTGGTTGCATTCTACTTCAGAGCACCTA
TCAAGGCATTTTTTCGCACCCGAGTTGAGTATGATTCTTGATTATCTCTT
GGATATTGTCCTTTCAGTCACTGACAGCCCATCCTCTCGTTCAGTTATAT
GGTATGCGGTTGCATTGTTCCTTCGCCGGCCTGGTTGCACTGATCTCTGG
AGTCCATGTCAACTGATCTATATGGCTCTTCCTATTATTTCGCTAGGCCT
TCGCTAGAGCCGTCAATCCTCATTCTGCGAAATCCGGTTGGTCTCTGCAC
ACAACCACTCCGGGGTTACTTGTCCATGCCGTTCGCACATACGGGTGGCG
CTTCATTCCTAATCAAGTTATGCCGCCTCTCCTAGCAAATGCTGGGTTGG
TTTACCTAGCCTCAAACTTGGTTACATGGGTTGTCTAACTGCTATGGATA
GGATTGGCGCCGTCCTTTATACATCTTATCTACAAGTCCTTGGTGCTTTG
TACGAACCAGCGTCTCAAGGCATCAAACGCGTATACCCACCTGCTCCACC
TTCAAGCACATTTGCAGCTGGACTTATAGCGGGCACAATTCAGTCAATAG
TAGCGGCTCCTCTGGATGCGCTTCAGGTCCGCCTCCGAGCGAGTGACTTG
CTAGAGGGCCCCTACAAGAGCATGTGGCATTATGGCCGCCATAAACTCAA
TCAAATTGGGGTGCGTGGTATCTTCGCAGGGTGGGGCTTATCCTTCACGC
GCGACGCTTTTGGTTATGCAGTATTTTTCTCTTTCTTTGAGTTCGTGAAG
TCGCAAGCCTACTATTCATTTCTGACCTGGTACTACGGCTCACGGCGGAC
TCATTACGTGGAACAGTCACAGCACATCCAGTCGAGTGACCGCGGTGTAC
CGCTCATAAGACCACATTATGCTCTGGAGCCATGTTTCTTGATGGCTGCA
GGTGTTGCAGCTTCAATTGCTCAACAGAGTATACAGCACCCGCTAAGTGC
TATTCAAAGCCTCCATGTTGCCCGCTTGGAATACATTGACCATCAGGCGA
GTCTTCATCCTTCAAAAAGGGAAATGCTACGCCTGTACTACTCTGCATAC
CAAGAAACCTTGAAAAGATGCAGGAGGAAGGCATATAGGGCAGGTGGCTG
GCGTCGTTGGTTGTTTCGTGGGTTTGCAAGGGACGCTATTCGTCAGGTAC
CTAGCACTAGTGCAGGCTTGGTGATATTCGAGGTGGTGCGTCGTAAGTAC
GCTAATATGGCAGACGCTGTATATATCCAGAAAGATGGTTATGACATTCT
TTTAGCATGATAAACATGCTGGTTCAATCATTGCGCTCCTTCCCCCCCCC
CCCCAAAAACCCACGAAAAAAAAAAGGCTACTTTCGAAGAAGGATGTGTG
GTGTGTGCGGTATGACAGCTAGGTTGATATCGGATAGAAAGTGTTAAAAT
GATAAAGTTCATTGTCGCTTGTGGTCCATGAAAGCTAGCTATACATTGTA
ACGACGAGTAGTAAAGGGGCC back to topCoding sequence (CDS) from alignment at ch4:2434435..2436305- >KJC3_005367-T1 ID=KJC3_005367-T1|Name=KJC3_005367-T1|organism=Aspergillus niger KJC3|type=CDS|length=4824bp|location=Sequence derived from alignment at ch4:2434435..2436305- (Aspergillus niger KJC3)
GATTGGCGCCGTCCTTTATACATCTTATCTACAAGTCCTTGGTGCTTTGT
ACGAACCAGCGTCTCAAGGCATCAAACGCGTATACCCACCTGCTCCACCT
TCAAGCACATTTGCAGCTGGACTTATAGCGGGCACAATTCAGTCAATAGT
AGCGGCTCCTCTGGATGCGCTTCAGGTCCGCCTCCGAGCGAGTGACTTGC
TAGAGGGCCCCTACAAGAGCATGTGGCATTATGGCCGCCATAAACTCAAT
CAAATTGGGGTGCGTGGTATCTTCGCAGGGTGGGGCTTATCCTTCACGCG
CGACGCTTTTGGTTATGCAGTATTTTTCTCTTTCTTTGAGTTCGTGAAGT
CGCAAGCCTACTATTCATTTCTGACCTGGTACTACGGCTCACGGCGGACT
CATTACGTGGAACAGTCACAGCACATCCAGTCGAGTGACCGCGGTGTACC
GCTCATAAGACCACATTATGCTCTGGAGCCATGTTTCTTGATGGCTGCAG
GTGTTGCAGCTTCAATTGCTCAACAGAGTATACAGCACCCGCTAAGTGCT
ATTCAAAGCCTCCATGTTGCCCGCTTGGAATACATTGACCATCAGGCGAG
TCTTCATCCTTCAAAAAGGGAAATGCTACGCCTGTACTACTCTGCATACC
AAGAAACCTTGAAAAGATGCAGGAGGAAGGCATATAGGGCAGGTGGCTGG
CGTCGTTGGTTGTTTCGTGGGTTTGCAAGGGACGCTATTCGTCAGGTACC
TAGCACTAGTGCAGGCTTGGTGATATTCGAGGTGGTGCGTCGTAAGTACG
CTAATATGGCAGACGCTGTATATATCCAGAAAGATGGTTATGACATTCTT
TTAGCATGAGCCTTCGCTAGAGCCGTCAATCCTCATTCTGCGAAATCCGG
TTGGTCTCTGCACACAACCACTCCGGGGTTACTTGTCCATGCCGTTCGCA
CATACGGGTGGCGCTTCATTCCTAATCAAGTTATGCCGCCTCTCCTAGCA
AATGCTGGTTATATGATGGCCACTACTCAGACATTACCCACATTTGACCA
TACCTCGAGCTTGGATTCGGGGAACTCGTCACGCAGAAATCCGCGACAGA
ATGCAGCCACTGGTGCCTCTGCTGCGGGAGTGCGTGCTCTTAGTGCACAA
CTGGTTGCATTCTACTTCAGAGCACCTATCAAGGCATTTTTTCGCACCCG
AGTTGAGATTGGCGCCGTCCTTTATACATCTTATCTACAAGTCCTTGGTG
CTTTGTACGAACCAGCGTCTCAAGGCATCAAACGCGTATACCCACCTGCT
CCACCTTCAAGCACATTTGCAGCTGGACTTATAGCGGGCACAATTCAGTC
AATAGTAGCGGCTCCTCTGGATGCGCTTCAGGTCCGCCTCCGAGCGAGTG
ACTTGCTAGAGGGCCCCTACAAGAGCATGTGGCATTATGGCCGCCATAAA
CTCAATCAAATTGGGGTGCGTGGTATCTTCGCAGGGTGGGGCTTATCCTT
CACGCGCGACGCTTTTGGTTATGCAGTATTTTTCTCTTTCTTTGAGTTCG
TGAAGTCGCAAGCCTACTATTCATTTCTGACCTGGTACTACGGCTCACGG
CGGACTCATTACGTGGAACAGTCACAGCACATCCAGTCGAGTGACCGCGG
TGTACCGCTCATAAGACCACATTATGCTCTGGAGCCATGTTTCTTGATGG
CTGCAGGTGTTGCAGCTTCAATTGCTCAACAGAGTATACAGCACCCGCTA
AGTGCTATTCAAAGCCTCCATGTTGCCCGCTTGGAATACATTGACCATCA
GGCGAGTCTTCATCCTTCAAAAAGGGAAATGCTACGCCTGTACTACTCTG
CATACCAAGAAACCTTGAAAAGATGCAGGAGGAAGGCATATAGGGCAGGT
GGCTGGCGTCGTTGGTTGTTTCGTGGGTTTGCAAGGGACGCTATTCGTCA
GGTACCTAGCACTAGTGCAGGCTTGGTGATATTCGAGGTGGTGCGTCGTA
AGTACGCTAATATGGCAGACGCTGTATATATCCAGAAAGATGGTTATGAC
ATTCTTTTAGCATGAGCCTTCGCTAGAGCCGTCAATCCTCATTCTGCGAA
ATCCGGTTGGTCTCTGCACACAACCACTCCGGGGTTACTTGTCCATGCCG
TTCGCACATACGGGTGGCGCTTCATTCCTAATCAAGTTATGCCGCCTCTC
CTAGCAAATGCTGGTTATATGATGGCCACTACTCAGACATTACCCACATT
TGACCATACCTCGAGCTTGGATTCGGGGAACTCGTCACGCAGAAATCCGC
GACAGAATGCAGCCACTGGTGCCTCTGCTGCGGGAGTGCGTGCTCTTAGT
GCACAACTGGTTGCATTCTACTTCAGAGCACCTATCAAGGCATTTTTTCG
CACCCGAGTTGAGATTGGCGCCGTCCTTTATACATCTTATCTACAAGTCC
TTGGTGCTTTGTACGAACCAGCGTCTCAAGGCATCAAACGCGTATACCCA
CCTGCTCCACCTTCAAGCACATTTGCAGCTGGACTTATAGCGGGCACAAT
TCAGTCAATAGTAGCGGCTCCTCTGGATGCGCTTCAGGTCCGCCTCCGAG
CGAGTGACTTGCTAGAGGGCCCCTACAAGAGCATGTGGCATTATGGCCGC
CATAAACTCAATCAAATTGGGGTGCGTGGTATCTTCGCAGGGTGGGGCTT
ATCCTTCACGCGCGACGCTTTTGGTTATGCAGTATTTTTCTCTTTCTTTG
AGTTCGTGAAGTCGCAAGCCTACTATTCATTTCTGACCTGGTACTACGGC
TCACGGCGGACTCATTACGTGGAACAGTCACAGCACATCCAGTCGAGTGA
CCGCGGTGTACCGCTCATAAGACCACATTATGCTCTGGAGCCATGTTTCT
TGATGGCTGCAGGTGTTGCAGCTTCAATTGCTCAACAGAGTATACAGCAC
CCGCTAAGTGCTATTCAAAGCCTCCATGTTGCCCGCTTGGAATACATTGA
CCATCAGGCGAGTCTTCATCCTTCAAAAAGGGAAATGCTACGCCTGTACT
ACTCTGCATACCAAGAAACCTTGAAAAGATGCAGGAGGAAGGCATATAGG
GCAGGTGGCTGGCGTCGTTGGTTGTTTCGTGGGTTTGCAAGGGACGCTAT
TCGTCAGGTACCTAGCACTAGTGCAGGCTTGGTGATATTCGAGGTGGTGC
GTCGTAAGTACGCTAATATGGCAGACGCTGTATATATCCAGAAAGATGGT
TATGACATTCTTTTAGCATGAGCCTTCGCTAGAGCCGTCAATCCTCATTC
TGCGAAATCCGGTTGGTCTCTGCACACAACCACTCCGGGGTTACTTGTCC
ATGCCGTTCGCACATACGGGTGGCGCTTCATTCCTAATCAAGTTATGCCG
CCTCTCCTAGCAAATGCTGGTTATATGATGGCCACTACTCAGACATTACC
CACATTTGACCATACCTCGAGCTTGGATTCGGGGAACTCGTCACGCAGAA
ATCCGCGACAGAATGCAGCCACTGGTGCCTCTGCTGCGGGAGTGCGTGCT
CTTAGTGCACAACTGGTTGCATTCTACTTCAGAGCACCTATCAAGGCATT
TTTTCGCACCCGAGTTGAGATTGGCGCCGTCCTTTATACATCTTATCTAC
AAGTCCTTGGTGCTTTGTACGAACCAGCGTCTCAAGGCATCAAACGCGTA
TACCCACCTGCTCCACCTTCAAGCACATTTGCAGCTGGACTTATAGCGGG
CACAATTCAGTCAATAGTAGCGGCTCCTCTGGATGCGCTTCAGGTCCGCC
TCCGAGCGAGTGACTTGCTAGAGGGCCCCTACAAGAGCATGTGGCATTAT
GGCCGCCATAAACTCAATCAAATTGGGGTGCGTGGTATCTTCGCAGGGTG
GGGCTTATCCTTCACGCGCGACGCTTTTGGTTATGCAGTATTTTTCTCTT
TCTTTGAGTTCGTGAAGTCGCAAGCCTACTATTCATTTCTGACCTGGTAC
TACGGCTCACGGCGGACTCATTACGTGGAACAGTCACAGCACATCCAGTC
GAGTGACCGCGGTGTACCGCTCATAAGACCACATTATGCTCTGGAGCCAT
GTTTCTTGATGGCTGCAGGTGTTGCAGCTTCAATTGCTCAACAGAGTATA
CAGCACCCGCTAAGTGCTATTCAAAGCCTCCATGTTGCCCGCTTGGAATA
CATTGACCATCAGGCGAGTCTTCATCCTTCAAAAAGGGAAATGCTACGCC
TGTACTACTCTGCATACCAAGAAACCTTGAAAAGATGCAGGAGGAAGGCA
TATAGGGCAGGTGGCTGGCGTCGTTGGTTGTTTCGTGGGTTTGCAAGGGA
CGCTATTCGTCAGGTACCTAGCACTAGTGCAGGCTTGGTGATATTCGAGG
TGGTGCGTCGTAAGTACGCTAATATGGCAGACGCTGTATATATCCAGAAA
GATGGTTATGACATTCTTTTAGCATGAGCCTTCGCTAGAGCCGTCAATCC
TCATTCTGCGAAATCCGGTTGGTCTCTGCACACAACCACTCCGGGGTTAC
TTGTCCATGCCGTTCGCACATACGGGTGGCGCTTCATTCCTAATCAAGTT
ATGCCGCCTCTCCTAGCAAATGCTGGTTATATGATGGCCACTACTCAGAC
ATTACCCACATTTGACCATACCTCGAGCTTGGATTCGGGGAACTCGTCAC
GCAGAAATCCGCGACAGAATGCAGCCACTGGTGCCTCTGCTGCGGGAGTG
CGTGCTCTTAGTGCACAACTGGTTGCATTCTACTTCAGAGCACCTATCAA
GGCATTTTTTCGCACCCGAGTTGA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_005367-T1.utr3p1 | KJC3_005367-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_005367-T1.utr5p1 | KJC3_005367-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR018108 |
| DBxref | InterPro:IPR023395 |
| DBxref | PFAM:PF00153 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch4 | supercontig | ch4:2434435..2436305 - |
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