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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:2550424..2552559- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_005377-T1 ID=KJC3_005377-T1|Name=KJC3_005377-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2136bp|location=Sequence derived from alignment at ch4:2550424..2552559- (Aspergillus niger KJC3)
GGATACGTAGTACTCCGCTGCCTATCCATCCATGAACTTGTCTACATGGC
CAATTTCTTCGCGGATTGCTGATCCGCCTCCTTATCACCGCCAGAACTGA
CGATTGCATTGTCATGCTAAAATGAAGCTCTTCAACCTTCTCTTGTCTTT
TCTCTGCATGATCAGTTCCGCTTCTTGCGGCCTCGCAGACACAGACAAGT
TTGAGAGATATCGTTCACTCTCTCGCTCCGCCCCAATCGAACTGAACGAC
TCATCGTACGAAGAGATAACATCTAAGCCTCGCGACTATCATGTCGCAGT
GCTTTTGACAGCCGCAGACGCTCGCTATGGGTGTATTCTTTGTCGCGAAT
TTCAACCTGAGTGGGAGCTCATAGCACGAAGCTGGAACAAAGGTCCCAAG
CCCGACGGACTTCAAATGCTCTTTGGGACCCTTGACTTTTCCGATGGAAA
GGGGACCTTTCAGAAGGTATCCAGCAATACATGGCCTAGCAGTCTAGAAT
TTTCAACTGACACAATTGGCATTGAATAGTTGATGCTCCAAACTGCGCCT
GTTCTCCTGGTCTTTCCTCCTACCGTTGGCCCCTTCGCCAAGATTGACGA
CGCACCTCTGCGATTTGACTTTAGCGGGTAACTATATACTGAATCTACTA
GTCGATTGATTATCACTGACGTCGACCTACAGCCCTATCTCTGCTGAACA
GCTATATACATGGATGAACCGTCAGCTTCCAGAGGGCCCGAAGCCGCCAC
TTGTTCGTCCGATCAACTACATGCGACTTGTCTCCGGCATAACCATTTTG
ATGGGTGCTGTGACCCTTTTTACAGTTTTGTCACCTTATGTCCTTCCCAT
TGTTCGTAACCGGAACTTGTGGGCTGCTTTCAGTCTGATTGCCATCCTCC
TATTCACAAGTGGCCACATGTTCAACCATATTCGCAAAGTCCCATATGTT
GCCGGAGATGGTAGAGGTGGTATTAGCTACTTCGCTGGTGGATTTTCAAA
CCAGTTCGGCATGGAGACGCAGATTGTTGCTGCCATCTGTACGTTGCCCT
TCATAACATGCATACATCTAACCTCATATGTGGATCTGATGCTAATTCGC
TAATGCTGTCGACAGATGCCGTCCTATCTTTTGCGACAATTGCCCTTGCA
ATGAAGGTGCCCCGTATCGCAGACAACAAGGCACAACAGGTAGCTGTGAT
CATCTGGGGTTCCGTACTCCTTGGTATGTACAGCTTCCTTCTGAGTGTGT
TCAAGACGAAGAATGGGGGATATCCGTTTTTTCTTCCGCCATTCTAGAGG
ATTTCCTATGTACGTTATCGGCCTGAGCTATTCAGTCCGACCAAGTGTGA
ACACGTTTGCTTGGGGTTAGCGGTCGTTCTAAGGTAGTAGCAGTATGCTA
CTATCTCAACTCCTTTCCTTCGTCCAAGCTCCTCCGTTATCGTGTAGTTA
CTGTATAGTAACATGGTGGATCAACTCTTCTTCCAAACGTCGAGAATCTG
CTTAAACTGTCATCTTAGATGGTCAATGGAATGAACTATATAAGGGCGGG
AGTCGCAAATTAGTTGTTTCATTGACCACTATTATTTATCGGGTATCAAT
CGTTTGTTCCAAACACTGGTCTACAGTGGGCTTATCTGCGACTTCATTTC
AAGGGAGCCCGAGAGTTTCTTAACTTGTCGTGGCATCGCTGAGCCTAGTA
AAGTGGCGGCATGCTCACTCTAAACTCTGCAATTCTCAAAACTATCGAAA
CTCAGTATGGAGTAAACTATTGCAACTTAGGTACACAAGGGTCAGACTCC
GATTTTCTCGCACAGTGTATCAACATGAAATAATATAGCCGCCGCTACAG
CCACCTCATAGGTGCTTCCTTGTAGGCAGTGAGAAATTAGTCCTTCTTAG
AGCAGGAAGCTCAATGGCCAGTGGCTCGGTGTCAACACACATGGCTTTCG
CTTTATCGGCTTCGAATCGAGCACGAGTTATGCGCGTTGCATGTGCCAGG
ATGTAAAGTGACTCCTCCAATGTACTAAAGACCTGCGCAAAGAAGCTTCG
AAAGAATCTCGGAACACCGGATTATACAACATAAAAAGTGCTTAATTGAT
CTTGAAGGTAAGGTATATAATTACGTAACATTGTAT back to topCoding sequence (CDS) from alignment at ch4:2550424..2552559- >KJC3_005377-T1 ID=KJC3_005377-T1|Name=KJC3_005377-T1|organism=Aspergillus niger KJC3|type=CDS|length=3924bp|location=Sequence derived from alignment at ch4:2550424..2552559- (Aspergillus niger KJC3)
ATGCCGTCCTATCTTTTGCGACAATTGCCCTTGCAATGAAGGTGCCCCGT
ATCGCAGACAACAAGGCACAACAGGTAGCTGTGATCATCTGGGGTTCCGT
ACTCCTTGGTATGTACAGCTTCCTTCTGAGTGTGTTCAAGACGAAGAATG
GGGGATATCCGTTTTTTCTTCCGCCATTCTAGCCCTATCTCTGCTGAACA
GCTATATACATGGATGAACCGTCAGCTTCCAGAGGGCCCGAAGCCGCCAC
TTGTTCGTCCGATCAACTACATGCGACTTGTCTCCGGCATAACCATTTTG
ATGGGTGCTGTGACCCTTTTTACAGTTTTGTCACCTTATGTCCTTCCCAT
TGTTCGTAACCGGAACTTGTGGGCTGCTTTCAGTCTGATTGCCATCCTCC
TATTCACAAGTGGCCACATGTTCAACCATATTCGCAAAGTCCCATATGTT
GCCGGAGATGGTAGAGGTGGTATTAGCTACTTCGCTGGTGGATTTTCAAA
CCAGTTCGGCATGGAGACGCAGATTGTTGCTGCCATCTTTGATGCTCCAA
ACTGCGCCTGTTCTCCTGGTCTTTCCTCCTACCGTTGGCCCCTTCGCCAA
GATTGACGACGCACCTCTGCGATTTGACTTTAGCGGATGAAGCTCTTCAA
CCTTCTCTTGTCTTTTCTCTGCATGATCAGTTCCGCTTCTTGCGGCCTCG
CAGACACAGACAAGTTTGAGAGATATCGTTCACTCTCTCGCTCCGCCCCA
ATCGAACTGAACGACTCATCGTACGAAGAGATAACATCTAAGCCTCGCGA
CTATCATGTCGCAGTGCTTTTGACAGCCGCAGACGCTCGCTATGGGTGTA
TTCTTTGTCGCGAATTTCAACCTGAGTGGGAGCTCATAGCACGAAGCTGG
AACAAAGGTCCCAAGCCCGACGGACTTCAAATGCTCTTTGGGACCCTTGA
CTTTTCCGATGGAAAGGGGACCTTTCAGAAGATGCCGTCCTATCTTTTGC
GACAATTGCCCTTGCAATGAAGGTGCCCCGTATCGCAGACAACAAGGCAC
AACAGGTAGCTGTGATCATCTGGGGTTCCGTACTCCTTGGTATGTACAGC
TTCCTTCTGAGTGTGTTCAAGACGAAGAATGGGGGATATCCGTTTTTTCT
TCCGCCATTCTAGCCCTATCTCTGCTGAACAGCTATATACATGGATGAAC
CGTCAGCTTCCAGAGGGCCCGAAGCCGCCACTTGTTCGTCCGATCAACTA
CATGCGACTTGTCTCCGGCATAACCATTTTGATGGGTGCTGTGACCCTTT
TTACAGTTTTGTCACCTTATGTCCTTCCCATTGTTCGTAACCGGAACTTG
TGGGCTGCTTTCAGTCTGATTGCCATCCTCCTATTCACAAGTGGCCACAT
GTTCAACCATATTCGCAAAGTCCCATATGTTGCCGGAGATGGTAGAGGTG
GTATTAGCTACTTCGCTGGTGGATTTTCAAACCAGTTCGGCATGGAGACG
CAGATTGTTGCTGCCATCTTTGATGCTCCAAACTGCGCCTGTTCTCCTGG
TCTTTCCTCCTACCGTTGGCCCCTTCGCCAAGATTGACGACGCACCTCTG
CGATTTGACTTTAGCGGATGAAGCTCTTCAACCTTCTCTTGTCTTTTCTC
TGCATGATCAGTTCCGCTTCTTGCGGCCTCGCAGACACAGACAAGTTTGA
GAGATATCGTTCACTCTCTCGCTCCGCCCCAATCGAACTGAACGACTCAT
CGTACGAAGAGATAACATCTAAGCCTCGCGACTATCATGTCGCAGTGCTT
TTGACAGCCGCAGACGCTCGCTATGGGTGTATTCTTTGTCGCGAATTTCA
ACCTGAGTGGGAGCTCATAGCACGAAGCTGGAACAAAGGTCCCAAGCCCG
ACGGACTTCAAATGCTCTTTGGGACCCTTGACTTTTCCGATGGAAAGGGG
ACCTTTCAGAAGATGCCGTCCTATCTTTTGCGACAATTGCCCTTGCAATG
AAGGTGCCCCGTATCGCAGACAACAAGGCACAACAGGTAGCTGTGATCAT
CTGGGGTTCCGTACTCCTTGGTATGTACAGCTTCCTTCTGAGTGTGTTCA
AGACGAAGAATGGGGGATATCCGTTTTTTCTTCCGCCATTCTAGCCCTAT
CTCTGCTGAACAGCTATATACATGGATGAACCGTCAGCTTCCAGAGGGCC
CGAAGCCGCCACTTGTTCGTCCGATCAACTACATGCGACTTGTCTCCGGC
ATAACCATTTTGATGGGTGCTGTGACCCTTTTTACAGTTTTGTCACCTTA
TGTCCTTCCCATTGTTCGTAACCGGAACTTGTGGGCTGCTTTCAGTCTGA
TTGCCATCCTCCTATTCACAAGTGGCCACATGTTCAACCATATTCGCAAA
GTCCCATATGTTGCCGGAGATGGTAGAGGTGGTATTAGCTACTTCGCTGG
TGGATTTTCAAACCAGTTCGGCATGGAGACGCAGATTGTTGCTGCCATCT
TTGATGCTCCAAACTGCGCCTGTTCTCCTGGTCTTTCCTCCTACCGTTGG
CCCCTTCGCCAAGATTGACGACGCACCTCTGCGATTTGACTTTAGCGGAT
GAAGCTCTTCAACCTTCTCTTGTCTTTTCTCTGCATGATCAGTTCCGCTT
CTTGCGGCCTCGCAGACACAGACAAGTTTGAGAGATATCGTTCACTCTCT
CGCTCCGCCCCAATCGAACTGAACGACTCATCGTACGAAGAGATAACATC
TAAGCCTCGCGACTATCATGTCGCAGTGCTTTTGACAGCCGCAGACGCTC
GCTATGGGTGTATTCTTTGTCGCGAATTTCAACCTGAGTGGGAGCTCATA
GCACGAAGCTGGAACAAAGGTCCCAAGCCCGACGGACTTCAAATGCTCTT
TGGGACCCTTGACTTTTCCGATGGAAAGGGGACCTTTCAGAAGATGCCGT
CCTATCTTTTGCGACAATTGCCCTTGCAATGAAGGTGCCCCGTATCGCAG
ACAACAAGGCACAACAGGTAGCTGTGATCATCTGGGGTTCCGTACTCCTT
GGTATGTACAGCTTCCTTCTGAGTGTGTTCAAGACGAAGAATGGGGGATA
TCCGTTTTTTCTTCCGCCATTCTAGCCCTATCTCTGCTGAACAGCTATAT
ACATGGATGAACCGTCAGCTTCCAGAGGGCCCGAAGCCGCCACTTGTTCG
TCCGATCAACTACATGCGACTTGTCTCCGGCATAACCATTTTGATGGGTG
CTGTGACCCTTTTTACAGTTTTGTCACCTTATGTCCTTCCCATTGTTCGT
AACCGGAACTTGTGGGCTGCTTTCAGTCTGATTGCCATCCTCCTATTCAC
AAGTGGCCACATGTTCAACCATATTCGCAAAGTCCCATATGTTGCCGGAG
ATGGTAGAGGTGGTATTAGCTACTTCGCTGGTGGATTTTCAAACCAGTTC
GGCATGGAGACGCAGATTGTTGCTGCCATCTTTGATGCTCCAAACTGCGC
CTGTTCTCCTGGTCTTTCCTCCTACCGTTGGCCCCTTCGCCAAGATTGAC
GACGCACCTCTGCGATTTGACTTTAGCGGATGAAGCTCTTCAACCTTCTC
TTGTCTTTTCTCTGCATGATCAGTTCCGCTTCTTGCGGCCTCGCAGACAC
AGACAAGTTTGAGAGATATCGTTCACTCTCTCGCTCCGCCCCAATCGAAC
TGAACGACTCATCGTACGAAGAGATAACATCTAAGCCTCGCGACTATCAT
GTCGCAGTGCTTTTGACAGCCGCAGACGCTCGCTATGGGTGTATTCTTTG
TCGCGAATTTCAACCTGAGTGGGAGCTCATAGCACGAAGCTGGAACAAAG
GTCCCAAGCCCGACGGACTTCAAATGCTCTTTGGGACCCTTGACTTTTCC
GATGGAAAGGGGACCTTTCAGAAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_005377-T1.utr3p1 | KJC3_005377-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_005377-T1.utr5p1 | KJC3_005377-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| Note | SECRETED:SignalP(1-19) |
| Note | BUSCO:EOG09264R0D |
| DBxref | InterPro:IPR036249 |
| DBxref | InterPro:IPR021149 |
| DBxref | PFAM:PF04756 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch4 | supercontig | ch4:2550424..2552559 - |
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