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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:2568738..2571735- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_005384-T1 ID=KJC3_005384-T1|Name=KJC3_005384-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2998bp|location=Sequence derived from alignment at ch4:2568738..2571735- (Aspergillus niger KJC3)
CATTATCCTCGTTCTTTTCCATACTTATGCACTGATCATCACACCAGGCC
TATCCTGATAAAAGGCACCATTAAATCCGCCAGCGCCCTTTCGTGACATT
CTCTTCTCACCCTGATTCCCTCTTTAGCGCCTTCTCATCTTTTTCCCTGC
CATTTGGAGGGATTTCCCTGTCGGGTTGGTTCTTGGTTCATTCCTCGTCC
ATTATATTACCATCAGCCACACAAATTCATAATGGAACCAAGTACATCCC
TGAATGACGATAGTACGAAGACTCAACCATCCTTGGACGACCTTATCAAG
CAAGCTGCCGCCAAAGATGCCATCAAGGATTACAACGCCGCTGCAGAGCT
GTACTCTGAGGCCACGGAACTTCAAGCAGAGCTTAACGGAGAATTAGCGC
TCGAAAATGCAGACTTACTATTCGCTTACGGAAAAGCCCTCTACAACGTT
GCCGTCAGCAAGAGCGATGTGCTTGGGTCCAAGGTAGCTGGAGAATCACA
GCCGAGCAGCACGTCTATTGAGAGGCCATCCGCTGCGGCAACAGCCACAA
CCGCAGGCATCGTTGAGAAAGCTGTAGCCCAGAGCCCACCCGAGAGATCC
TCAGGAGCCCAGAAGACAAATACTGGTGATGTTCCAGCTAAGCCGTACTT
CCAATTTACTGGTGACGAAAACTTTGACGACTCGGATTCGGAAGACGAGG
CCGACGGCGAGGAAGCTGCGGCCGATGACGAAGACGACTTTGCCAATGCC
TTTGAAGTTCTTGACTTGGCACGTGTACTATACCACAAAAAGATGACTAC
GATAGAGGAAGGAATTGGCAAAGGGAAATCCGCAGGTTTACCTCCAGATC
TCAAACACGTCAAGGAACGTCTCGCGGATACCTACGATTTACAAGCCGAG
ATCTCACTGGAGGCAGAAAGGTTCAAAGACGCGGTGACGGACTTGAGGAC
GTCTCTAGAATTAAGGCAGTCTCTGTTTCCGATGGAGGATCCTTCTGTTG
CAGAATGTCACTACAAGCTTTCCCTTGCTCTAGAATTTGGCTCCGTCAAG
AATGAGAATGACAACTCCCAAGAGGACACCAGCCCCAAAGAGCCGGTCGA
CGAGGAAATGAGGAAAGAGGCCGCAGCTCAAATGGAAAAGGCTATTGAAA
GTTGCCGTCTAAGGATGGATCAAGAACAGAAGAAGTTGGTCGACGATAGT
TCGTTGGATGAGGACAGGGTGACCGCTATGAAGAGAAGAATAGCAAATGT
CAAAGACATTATAGCTGACATGGAGCAAAGGGTAAGCAACGACCTTCTTT
CCAAATCTCTTTAACGCGATCCCTTCCTACTATGTTTGCTTCGGCTACAG
TTACTGAGAACGTTGACAGCTCGTCGATCTTCGACACCCGCCAGTATCTG
CTATCGAGAATAGCGATGCAGACAACACGGTGCTGAAGGGTATTTTGGGT
CAGATTATGGGGCATTCCCCTTCGGAGCAAAAGGCTCATCTCGATGCTGT
CACGAGAGAAGCAAATGACCTTTCTGCGTTCATTAAAAGAAAACCTGCGA
GCAACAAGCCACCACAGAAGAGTGACACTGTAGCAAAACGATCGGCTCCG
GAAGATGGCGCGGGAGGCGATACAAAGAGAGCACGAGCAGGCGATGAACT
TGAATGAACCTGGGTATACTGATCGCCAGAGGCATCAACGTGGCTGGTCG
GGTGCTCTGTCTATCAACCCTTTGCGGCAGCTAGCACTCACGTGAGAAAA
TGATCATTCATGCTGGCATTTACCCAAAGGATTAGAGCAATAATTCTGAT
ATGATACCCAATGAAGCGAGGTTGAAGAGATATCTACGCATTATACAGCA
GTAGCCACCAATTTGTCTGTGAAATCTATTGTGATACCACATATTATAAA
CATTACCGATGAATGTAACTCCCAACATATTCATAAAGAAGGAAAGGTGA
AAAGATTAAGGAATTAGAGCCGTCTGGTGCACAAGGCAAGGCGGTTTCAT
ATAAACAACGCTACCTTGCCCATTCTGAACTCAATCCGAAGATGCGGGCC
GTTGAGTGATATTTCATCGAACATGATCTCATGAAGTTTCATTAGACGCA
AGAGCATAAAACATTATCACAGGGCTGTGATTCCGAATAGAGAAGATCGG
CGTTCAGGCAGTTTGCGATTTCTTCGGCGTACGGCCAACCCAGGGGTCCA
GATTCCAGAGAATAAGTCCTCGCATTCATCTTCGTTCTGGCTATCAAATT
CTATACTGTTAGGAGGTTGGCCATGTCCAACCTCAGTAGAACCGGGATAT
GCGGGCAGTAATGTTGATTCAACAACGTCGGATGATTCCCAAAAAGAAGA
TATCATAACCCTTTCGGTCTCCAAGATGAACTTGCCGATTTTGTAACGTT
GTGACTCTTCTTCGGCAGCGATATATTTCCAGCCGAGCACATTTCCGCAA
ACGGAACAGTTAATGTCGCCTACTGTGTGCGCACCAGTGACCAGTCTCCG
TGGCACGGGCTGCTGTATCACCGTGTTTAAAAGTGTATCAGTAGGTGAAG
CTTTTCGGGCGAGCGAAGGCTCGCCGGACACAAGATAGGCACGGCCGTAG
CGACCCGTGAACCCTTTGCTGATTATCTGCGACGTCAGGCATATATCTGC
TGCACAGCATGAACAGCGGATACATGAGATATGGCCCTCCAGATAATTGG
CATCACTTGGCTTCACAGATTGTCCGGGTCCTGCTTCCGAAGATGACACC
CTGGACCTCACGCTTCGCTGTTTATCACGGAAGAAAGATGGCCGGAGCAA
GAATTTAGGAAACATAGAGCCTTGTATATGGGATCTGCCCTGCGAAGTAC
GTGGGTAGGCGTGCACGCGTAACAACAAAACGGCGAGAGCATTAAAGAAT
TAATTACGGGATGTTGCGAGTTGTTGTCATAATTCCGGTTGCCTCTGGAT
CAGAGGAAGAGGCATTTGTATAGTGAGGTATCTGGAAATGGGTAGGTA back to topCoding sequence (CDS) from alignment at ch4:2568738..2571735- >KJC3_005384-T1 ID=KJC3_005384-T1|Name=KJC3_005384-T1|organism=Aspergillus niger KJC3|type=CDS|length=2676bp|location=Sequence derived from alignment at ch4:2568738..2571735- (Aspergillus niger KJC3)
CTCGTCGATCTTCGACACCCGCCAGTATCTGCTATCGAGAATAGCGATGC
AGACAACACGGTGCTGAAGGGTATTTTGGGTCAGATTATGGGGCATTCCC
CTTCGGAGCAAAAGGCTCATCTCGATGCTGTCACGAGAGAAGCAAATGAC
CTTTCTGCGTTCATTAAAAGAAAACCTGCGAGCAACAAGCCACCACAGAA
GAGTGACACTGTAGCAAAACGATCGGCTCCGGAAGATGGCGCGGGAGGCG
ATACAAAGAGAGCACGAGCAGGCGATGAACTTGAATGAATGGAACCAAGT
ACATCCCTGAATGACGATAGTACGAAGACTCAACCATCCTTGGACGACCT
TATCAAGCAAGCTGCCGCCAAAGATGCCATCAAGGATTACAACGCCGCTG
CAGAGCTGTACTCTGAGGCCACGGAACTTCAAGCAGAGCTTAACGGAGAA
TTAGCGCTCGAAAATGCAGACTTACTATTCGCTTACGGAAAAGCCCTCTA
CAACGTTGCCGTCAGCAAGAGCGATGTGCTTGGGTCCAAGGTAGCTGGAG
AATCACAGCCGAGCAGCACGTCTATTGAGAGGCCATCCGCTGCGGCAACA
GCCACAACCGCAGGCATCGTTGAGAAAGCTGTAGCCCAGAGCCCACCCGA
GAGATCCTCAGGAGCCCAGAAGACAAATACTGGTGATGTTCCAGCTAAGC
CGTACTTCCAATTTACTGGTGACGAAAACTTTGACGACTCGGATTCGGAA
GACGAGGCCGACGGCGAGGAAGCTGCGGCCGATGACGAAGACGACTTTGC
CAATGCCTTTGAAGTTCTTGACTTGGCACGTGTACTATACCACAAAAAGA
TGACTACGATAGAGGAAGGAATTGGCAAAGGGAAATCCGCAGGTTTACCT
CCAGATCTCAAACACGTCAAGGAACGTCTCGCGGATACCTACGATTTACA
AGCCGAGATCTCACTGGAGGCAGAAAGGTTCAAAGACGCGGTGACGGACT
TGAGGACGTCTCTAGAATTAAGGCAGTCTCTGTTTCCGATGGAGGATCCT
TCTGTTGCAGAATGTCACTACAAGCTTTCCCTTGCTCTAGAATTTGGCTC
CGTCAAGAATGAGAATGACAACTCCCAAGAGGACACCAGCCCCAAAGAGC
CGGTCGACGAGGAAATGAGGAAAGAGGCCGCAGCTCAAATGGAAAAGGCT
ATTGAAAGTTGCCGTCTAAGGATGGATCAAGAACAGAAGAAGTTGGTCGA
CGATAGTTCGTTGGATGAGGACAGGGTGACCGCTATGAAGAGAAGAATAG
CAAATGTCAAAGACATTATAGCTGACATGGAGCAAAGGCTCGTCGATCTT
CGACACCCGCCAGTATCTGCTATCGAGAATAGCGATGCAGACAACACGGT
GCTGAAGGGTATTTTGGGTCAGATTATGGGGCATTCCCCTTCGGAGCAAA
AGGCTCATCTCGATGCTGTCACGAGAGAAGCAAATGACCTTTCTGCGTTC
ATTAAAAGAAAACCTGCGAGCAACAAGCCACCACAGAAGAGTGACACTGT
AGCAAAACGATCGGCTCCGGAAGATGGCGCGGGAGGCGATACAAAGAGAG
CACGAGCAGGCGATGAACTTGAATGAATGGAACCAAGTACATCCCTGAAT
GACGATAGTACGAAGACTCAACCATCCTTGGACGACCTTATCAAGCAAGC
TGCCGCCAAAGATGCCATCAAGGATTACAACGCCGCTGCAGAGCTGTACT
CTGAGGCCACGGAACTTCAAGCAGAGCTTAACGGAGAATTAGCGCTCGAA
AATGCAGACTTACTATTCGCTTACGGAAAAGCCCTCTACAACGTTGCCGT
CAGCAAGAGCGATGTGCTTGGGTCCAAGGTAGCTGGAGAATCACAGCCGA
GCAGCACGTCTATTGAGAGGCCATCCGCTGCGGCAACAGCCACAACCGCA
GGCATCGTTGAGAAAGCTGTAGCCCAGAGCCCACCCGAGAGATCCTCAGG
AGCCCAGAAGACAAATACTGGTGATGTTCCAGCTAAGCCGTACTTCCAAT
TTACTGGTGACGAAAACTTTGACGACTCGGATTCGGAAGACGAGGCCGAC
GGCGAGGAAGCTGCGGCCGATGACGAAGACGACTTTGCCAATGCCTTTGA
AGTTCTTGACTTGGCACGTGTACTATACCACAAAAAGATGACTACGATAG
AGGAAGGAATTGGCAAAGGGAAATCCGCAGGTTTACCTCCAGATCTCAAA
CACGTCAAGGAACGTCTCGCGGATACCTACGATTTACAAGCCGAGATCTC
ACTGGAGGCAGAAAGGTTCAAAGACGCGGTGACGGACTTGAGGACGTCTC
TAGAATTAAGGCAGTCTCTGTTTCCGATGGAGGATCCTTCTGTTGCAGAA
TGTCACTACAAGCTTTCCCTTGCTCTAGAATTTGGCTCCGTCAAGAATGA
GAATGACAACTCCCAAGAGGACACCAGCCCCAAAGAGCCGGTCGACGAGG
AAATGAGGAAAGAGGCCGCAGCTCAAATGGAAAAGGCTATTGAAAGTTGC
CGTCTAAGGATGGATCAAGAACAGAAGAAGTTGGTCGACGATAGTTCGTT
GGATGAGGACAGGGTGACCGCTATGAAGAGAAGAATAGCAAATGTCAAAG
ACATTATAGCTGACATGGAGCAAAGG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005515 | protein binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_005384-T1.utr3p1 | KJC3_005384-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_005384-T1.utr5p1 | KJC3_005384-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR011990 |
| DBxref | InterPro:IPR019544 |
| DBxref | PFAM:PF10516 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch4 | supercontig | ch4:2568738..2571735 - |
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