|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:2579205..2581998+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_005387-T1 ID=KJC3_005387-T1|Name=KJC3_005387-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2794bp|location=Sequence derived from alignment at ch4:2579205..2581998+ (Aspergillus niger KJC3)
CCAGCCGCGCCTTACGGTTGTCGGACCGGAAAGCTATCAATCACCCTACT
TCATATAGTGTAGCCCACTATAACTTTACCAATTCCTTGACATAAAATAT
TATTACGTCCTCCTCTTGTAGCATTTCTGACGTCTCCCCCTTTTCAAGCT
CTGCCTGTTACTCGCTTCCAGCCTGACCGTCATCAATAGCACTAATACTA
TTATCCAGCCGACATTGTTCCTGCAGTCTCTGTCTCATAGCAAAGCAAGC
CTAGTTGTAAGTAGCACTTTATTATTCATTTTTAGCTGTTATTCTGTGTA
TACAATGCCTATGAATCTATCTATTATACTATTAAAGCCCCCGTTTGTAC
GATTTACTTGATCCGGTGTATATGTTAACCAGCTTCGACAATATTATACA
GACAAGCGTGTTCGGTCTAGCTATTCTTAATACCTCATTCTTGGATATGT
GAGCAATCCATAATGCAGAATTGCACCAATTCACCGGAAGACCAGGCCGC
TTCCGTCTGTCCTCCACCTCCACAATTCCCTGGAGATGACACCAGGCCGA
CATCTAAGAAGGAGCTCGCTGGATGGTACAGCTATGGTTGGGCTGCCGAG
GTTTTTACAGTGTGCGCTATGGGTATGCATATCTTACACAGGCCGAGAAG
TACGATTCTTACACCTCCTAACCTAATTTAGGATCGTTCCTCCCCATTAC
CCTAGAGCAAATGGCTCGCGAACGCGGCGTACTTCTTTCGGATAAGAAAA
CACCGTGCAGTGCTACTTGGAGCTCTCTAGAATCGACCTCACCATCAGGG
ACCTGGAACACCATCTTTGATGCCACTGCGTTTACGAAACCAGGCTCACC
CAGAACAAGCCAGTGCATTATTTATATTCTCGGCGTTGAAATAAACACTG
CAAGCTTCGCTATGTACACATTCTCATTGAGTGTATTCATACAAGCCATT
CTGATAATATCAATGTCAGGTGCTGCGGATCACGGAAGCTACCGCAAAAT
GCTGTTGGTTATCTTTGCACTTATCGGCTCCGTTTCTACGATGTTGTTTC
TTGCCGTCGTTCCAAGGCTCTATCTTCTCGGTGGGCTGTTCGCAATTATA
TCTAATACATGTTTCGGAGCTTCTTTTGTACTGTTGAATTCTTTCCTACC
CCTGCTGGTTCGCTATCATCCTATATTGATGGGTGGACATGGTGACGGGG
ATATACCCACCGGAACCAGCCATGATTCGACCTCTACAGCCGATGGCCCG
GGCCAAACTGACGGAACTGAAACAACATCACTGCTTCGGCCAGAACAAAA
CCGCAATGCGTACTCTCTGGGTGACGAAACTCAAGTGTTTGCTTCGAAGA
CTTCTCAGGAATTGAAGCTCTCCACAAAATTATCCTCAAACGGAATCGGC
ATCGGATACATAGGTGCAGTTATACTGCAAGCAATTTGCATCCTAGTTGT
TGTCGAAACTCACCAGACAACATTCTCGTTGCGCCTAGTCCTCTTTTTAA
TTGGGCTCTGGTGGTTCACCTTCACCATACCTGCGGCAATGTGGCTACGT
GCCCGGCCCGGCCCGCCCCTTCCATATGGGAAAGAGAGTGGGACATGGAC
TAGTTATATGGCATACGCTTGGAAGTCCTTGGGCAGGACAGTAATGCGCA
CTCGACATCTGAGAGATATCCTTTTATTCCTGGCAGCTTGGTTCCTCTTA
AGTGATGGTATCGCGACAGTCAGCGGGACCGCCGTCCTGTTTGCAAAGAC
ACAATTGGGGATGCAGCCAGCCGCTTTGGGGCTGATTAATGTCATTGCGA
TGATTGCAGGAGTTTTTGGAGCATTCTCTTGGAGCTTTGTGTCGCGGACA
TTCAATCTCCGGGCTTCACAAACGATAGTTGCTTGTATTATTCTATTCGA
GCTTGTGCCGCTCTATGGTCTCTTAGGCTTCATTCCCGCAATCAAAAGCC
TAGGGTACTTAGGCCTCCAACAACCATGGGAGATGTACCCATTGGGCGTC
ATATATGGACTTGTTATGGGTGGACTTTCTTCATACTGTCGGAGCTTCTT
TGGAGAATTGATCCCTCCGGGATATGAGGCTGCATTCTATGCTTTATATG
CCATTACTGATAAAGGCTCCAGTGTTTTCGGTCCCGCCATTGTTGGAATC
ATCACAGATCGTTACGGGGAAATCCGACCCGCCTTCGTCTTTCTTGCTGT
CCTGATTCTGCTCCCTTTACCATTAATGCTCTTGGTCGATGTAGAGCGTG
GAAAGAGGGACGCGCTTTCACTTTCGAAAGAACTTAAGGGTAGACCGAGA
CAGGAGGTACCGGTCTATGGAGCTGTCACTCATTGCCCGTCTCATAGCGA
GAACCTAGCGGAGTAGAGGCGGTGATGGTTGCGTAAAGGTTGATTTAAGA
ATCATGGTCTACTCTCCTGAGTAGATGTGGCGATTACCGAGGGTGTTACT
TTGTGTGGCCGAACAATGGCCCTGTTGATTCTGCCCTAGGCTTAGGGAAC
ATGTACTACTTATTCTAGTAGCGCTTAGTATCTATATAGATGGCATGCAC
CGTACCTGATGTCCACTGGTACTTGCACTTAGATTACTCAGCATAATAGA
CACAACGGGTGTGGAGGAGCAGGGTAAGCATGGCCGCATGTAAATTGATT
ACAATGGCTAAAAGAGTGTAATTCGAGACCTTGTCATGGAATGTGGCCAG
CTGGAAGGTCCGCAGGAGCAGGTTGAAACCTTGAAGGGAGGGGGGAAATG
ACTGAATACCAAGTAGTTAGCAACTACTGCAAGTAACTAACTAG back to topCoding sequence (CDS) from alignment at ch4:2579205..2581998+ >KJC3_005387-T1 ID=KJC3_005387-T1|Name=KJC3_005387-T1|organism=Aspergillus niger KJC3|type=CDS|length=3690bp|location=Sequence derived from alignment at ch4:2579205..2581998+ (Aspergillus niger KJC3)
ATGCAGAATTGCACCAATTCACCGGAAGACCAGGCCGCTTCCGTCTGTCC
TCCACCTCCACAATTCCCTGGAGATGACACCAGGCCGACATCTAAGAAGG
AGCTCGCTGGATGGTACAGCTATGGTTGGGCTGCCGAGGTTTTTACAGTG
TGCGCTATGGGATCGTTCCTCCCCATTACCCTAGAGCAAATGGCTCGCGA
ACGCGGCGTACTTCTTTCGGATAAGAAAACACCGTGCAGTGCTACTTGGA
GCTCTCTAGAATCGACCTCACCATCAGGGACCTGGAACACCATCTTTGAT
GCCACTGCGTTTACGAAACCAGGCTCACCCAGAACAAGCCAGTGCATTAT
TTATATTCTCGGCGTTGAAATAAACACTGCAAGCTTCGCTATGTACACAT
TCTCATTGAGTGTATTCATACAAGCCATTCTGATAATATCAATGTCAGGT
GCTGCGGATCACGGAAGCTACCGCAAAATGCTGTTGGTTATCTTTGCACT
TATCGGCTCCGTTTCTACGATGTTGTTTCTTGCCGTCGTTCCAAGGCTCT
ATCTTCTCGGTGGGCTGTTCGCAATTATATCTAATACATGTTTCGGAGCT
TCTTTTGTACTGTTGAATTCTTTCCTACCCCTGCTGGTTCGCTATCATCC
TATATTGATGGGTGGACATGGTGACGGGGATATACCCACCGGAACCAGCC
ATGATTCGACCTCTACAGCCGATGGCCCGGGCCAAACTGACGGAACTGAA
ACAACATCACTGCTTCGGCCAGAACAAAACCGCAATGCGTACTCTCTGGG
TGACGAAACTCAAGTGTTTGCTTCGAAGACTTCTCAGGAATTGAAGCTCT
CCACAAAATTATCCTCAAACGGAATCGGCATCGGATACATAGGTGCAGTT
ATACTGCAAGCAATTTGCATCCTAGTTGTTGTCGAAACTCACCAGACAAC
ATTCTCGTTGCGCCTAGTCCTCTTTTTAATTGGGCTCTGGTGGTTCACCT
TCACCATACCTGCGGCAATGTGGCTACGTGCCCGGCCCGGCCCGCCCCTT
CCATATGGGAAAGAGAGTGGGACATGGACTAGTTATATGGCATACGCTTG
GAAGTCCTTGGGCAGGACAGTAATGCGCACTCGACATCTGAGAGATATCC
TTTTATTCCTGGCAGCTTGGTTCCTCTTAAGTGATGGTATCGCGACAGTC
AGCGGGACCGCCGTCCTGTTTGCAAAGACACAATTGGGGATGCAGCCAGC
CGCTTTGGGGCTGATTAATGTCATTGCGATGATTGCAGGAGTTTTTGGAG
CATTCTCTTGGAGCTTTGTGTCGCGGACATTCAATCTCCGGGCTTCACAA
ACGATAGTTGCTTGTATTATTCTATTCGAGCTTGTGCCGCTCTATGGTCT
CTTAGGCTTCATTCCCGCAATCAAAAGCCTAGGGTACTTAGGCCTCCAAC
AACCATGGGAGATGTACCCATTGGGCGTCATATATGGACTTGTTATGGGT
GGACTTTCTTCATACTGTCGGAGCTTCTTTGGAGAATTGATCCCTCCGGG
ATATGAGGCTGCATTCTATGCTTTATATGCCATTACTGATAAAGGCTCCA
GTGTTTTCGGTCCCGCCATTGTTGGAATCATCACAGATCGTTACGGGGAA
ATCCGACCCGCCTTCGTCTTTCTTGCTGTCCTGATTCTGCTCCCTTTACC
ATTAATGCTCTTGGTCGATGTAGAGCGTGGAAAGAGGGACGCGCTTTCAC
TTTCGAAAGAACTTAAGGGTAGACCGAGACAGGAGGTACCGGTCTATGGA
GCTGTCACTCATTGCCCGTCTCATAGCGAGAACCTAGCGGAGTAGATGCA
GAATTGCACCAATTCACCGGAAGACCAGGCCGCTTCCGTCTGTCCTCCAC
CTCCACAATTCCCTGGAGATGACACCAGGCCGACATCTAAGAAGGAGCTC
GCTGGATGGTACAGCTATGGTTGGGCTGCCGAGGTTTTTACAGTGTGCGC
TATGGGATCGTTCCTCCCCATTACCCTAGAGCAAATGGCTCGCGAACGCG
GCGTACTTCTTTCGGATAAGAAAACACCGTGCAGTGCTACTTGGAGCTCT
CTAGAATCGACCTCACCATCAGGGACCTGGAACACCATCTTTGATGCCAC
TGCGTTTACGAAACCAGGCTCACCCAGAACAAGCCAGTGCATTATTTATA
TTCTCGGCGTTGAAATAAACACTGCAAGCTTCGCTATGTACACATTCTCA
TTGAGTGTATTCATACAAGCCATTCTGATAATATCAATGTCAGGTGCTGC
GGATCACGGAAGCTACCGCAAAATGCTGTTGGTTATCTTTGCACTTATCG
GCTCCGTTTCTACGATGTTGTTTCTTGCCGTCGTTCCAAGGCTCTATCTT
CTCGGTGGGCTGTTCGCAATTATATCTAATACATGTTTCGGAGCTTCTTT
TGTACTGTTGAATTCTTTCCTACCCCTGCTGGTTCGCTATCATCCTATAT
TGATGGGTGGACATGGTGACGGGGATATACCCACCGGAACCAGCCATGAT
TCGACCTCTACAGCCGATGGCCCGGGCCAAACTGACGGAACTGAAACAAC
ATCACTGCTTCGGCCAGAACAAAACCGCAATGCGTACTCTCTGGGTGACG
AAACTCAAGTGTTTGCTTCGAAGACTTCTCAGGAATTGAAGCTCTCCACA
AAATTATCCTCAAACGGAATCGGCATCGGATACATAGGTGCAGTTATACT
GCAAGCAATTTGCATCCTAGTTGTTGTCGAAACTCACCAGACAACATTCT
CGTTGCGCCTAGTCCTCTTTTTAATTGGGCTCTGGTGGTTCACCTTCACC
ATACCTGCGGCAATGTGGCTACGTGCCCGGCCCGGCCCGCCCCTTCCATA
TGGGAAAGAGAGTGGGACATGGACTAGTTATATGGCATACGCTTGGAAGT
CCTTGGGCAGGACAGTAATGCGCACTCGACATCTGAGAGATATCCTTTTA
TTCCTGGCAGCTTGGTTCCTCTTAAGTGATGGTATCGCGACAGTCAGCGG
GACCGCCGTCCTGTTTGCAAAGACACAATTGGGGATGCAGCCAGCCGCTT
TGGGGCTGATTAATGTCATTGCGATGATTGCAGGAGTTTTTGGAGCATTC
TCTTGGAGCTTTGTGTCGCGGACATTCAATCTCCGGGCTTCACAAACGAT
AGTTGCTTGTATTATTCTATTCGAGCTTGTGCCGCTCTATGGTCTCTTAG
GCTTCATTCCCGCAATCAAAAGCCTAGGGTACTTAGGCCTCCAACAACCA
TGGGAGATGTACCCATTGGGCGTCATATATGGACTTGTTATGGGTGGACT
TTCTTCATACTGTCGGAGCTTCTTTGGAGAATTGATCCCTCCGGGATATG
AGGCTGCATTCTATGCTTTATATGCCATTACTGATAAAGGCTCCAGTGTT
TTCGGTCCCGCCATTGTTGGAATCATCACAGATCGTTACGGGGAAATCCG
ACCCGCCTTCGTCTTTCTTGCTGTCCTGATTCTGCTCCCTTTACCATTAA
TGCTCTTGGTCGATGTAGAGCGTGGAAAGAGGGACGCGCTTTCACTTTCG
AAAGAACTTAAGGGTAGACCGAGACAGGAGGTACCGGTCTATGGAGCTGT
CACTCATTGCCCGTCTCATAGCGAGAACCTAGCGGAGTAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0022857 | transmembrane transporter activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_005387-T1.utr3p1 | KJC3_005387-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036259 |
| DBxref | InterPro:IPR020846 |
| DBxref | InterPro:IPR024671 |
| DBxref | PFAM:PF07690 |
| DBxref | PFAM:PF11700 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch4 | supercontig | ch4:2579205..2581998 + |
|
