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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:2593650..2595470- Legend: exonfive_prime_UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_005392-T1 ID=KJC3_005392-T1|Name=KJC3_005392-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1821bp|location=Sequence derived from alignment at ch4:2593650..2595470- (Aspergillus niger KJC3)
AGTGAACCAACTAGTAATAGGTTAACCGTGCCTCCTCCACTATCAATCAA
TCATCTACTCTAGTCGCCTCTTTCTCTACCTCTACCTTTGCCAACTGCCC
CGCTGCAACCGTTGGCTTCAAGCTTTAGATCGCTCGTCACCGAACCGGAC
TATTCTTTTCCTCCCACATCGGGGTCGTTGGCTTAATTCGGGCAGTGAAC
CATCCTAAAACCTTTCGCCTTGCTCGTTTACGCCGACCATGAATCCCTCC
ATCCCACCCTCGACGGCTGAATATGGCGGAGGTATGTCAATTCCTCTGTT
GCGCGTAGCTGAGAAACATTTGTTCCTCGTGCGACACTTTCTTGTCAGCA
TTTCTGACCCTTCAATGTCTAGATGAGGTGTCGGCGATTGTGCTCGACCC
CGGCTTCTCAACGACGCGAGCTGGCTTTGCAGGGGAGGACACACCCAAAT
CCCTGATTCCGACATACTACGGAAAATATTCCTCAGATGGCCAGTCGAAG
TTGGTCTTCGGTGATGATATCTTTGTTACGCCCCGGCCCGGTCTGTCGAT
TCACAACCCAATGAGTCGCGATGGAATCGTGGAGGACTGGGACATGGCAG
AGAAAGTATGGGAATACGCCTTTATTTCGCGCCTGACGGGCCCAAAGCCC
GGAAATCCCCTACAGAACGGATTGAACGACGTGCCGGAGGGCGAATTATC
TACAGAAATGGAAGGGGTCGAAACTGAGGAGAAGCTGCTTGCTGATAGCC
CGCTGCTGATGTCGGAGCCCGGCTGGAATCCCACGAAATCGCGCGAGAAG
ACTATCGAGCTTGCCATGGAGAAGTGGGGAACCCCAGCCTTCTATCTAGC
CAGGAATGGTGTCCTTTCAGCGTAAGTACCGACCTGTCAGTCCGATGGAC
TAGTCGAGTCTGTACATTTCGCTAACATGCTTCCTCGCCAAAAGCTTTGC
GGCCGGCAAGGCATCCGCTCTTGTGATTGACATCGGCGCTTCTAACATTT
CCGTAACCCCGGTTCACGACGGCATGATACTGAAGCGAGGAGTGCAGCAC
TCACCTCTCGGCGGTGATTATATCTCATCTCAGATCCGCGCTCTCTTCAA
GTCGAACGCCCCGCAGCCGATAACCATCACTCCTCATTACCTGATCTCGT
CCAAGACAGCAGTCGATGCCGGCCAACCCCCGCAAGCTAAATACAAGACT
TTCCCCCCCGACAGAGCTCCTGACGCATCTTACAGAACCCTTCTCGAGGA
GCGAACACTGTCCGAGTTCAAGGAATGTGTCGTCCAGGTCTGGCCTGGCC
CCAACAAGCTCTCCGCCACAGGTCCCAACGGTGTCTCGAACGAAGAACTG
GCCAAGAGCAGTCCCGGCCGGCCCTTCGAGTTCCCCGACGGCTATAACCA
AGTCTTTGGAGTGGATCGCTATAAGGTCGTCGAATCCCTGTTCGACGCCA
AAGCTGCAATCCCGGACCCTGAATCGGCATTCCCCGCACCGACGCCGGCA
CAAACTGTGCCAGAGCTCATCAAGAATGCGCTGAACGGCGTCGACGTCGA
CATCCGCCCGCACTTGTTGGCTAACGTTGTCGTCACGGGCGCCTCCAGCT
TACTCTATGGTTTCACCGACCGTTTGAACCAGGAGCTCATGCAGATGTTC
CCAGGTCCACGCGTTCGTATATCGGCCCCAGGAAACACCGCAGAGCGGAA
GTTTGGCTCTTGGATTGGTGGAAGTATCCTCGCCAGTCTGGGTACCTTCC
ATCAGATGTGGATCTCCAAGAAGGAGTTTGACGAACATGGTCCGAATATC
GTCGAGAAGCGCTGCAAGTAG back to topCoding sequence (CDS) from alignment at ch4:2593650..2595470- >KJC3_005392-T1 ID=KJC3_005392-T1|Name=KJC3_005392-T1|organism=Aspergillus niger KJC3|type=CDS|length=4257bp|location=Sequence derived from alignment at ch4:2593650..2595470- (Aspergillus niger KJC3)
CTTTGCGGCCGGCAAGGCATCCGCTCTTGTGATTGACATCGGCGCTTCTA
ACATTTCCGTAACCCCGGTTCACGACGGCATGATACTGAAGCGAGGAGTG
CAGCACTCACCTCTCGGCGGTGATTATATCTCATCTCAGATCCGCGCTCT
CTTCAAGTCGAACGCCCCGCAGCCGATAACCATCACTCCTCATTACCTGA
TCTCGTCCAAGACAGCAGTCGATGCCGGCCAACCCCCGCAAGCTAAATAC
AAGACTTTCCCCCCCGACAGAGCTCCTGACGCATCTTACAGAACCCTTCT
CGAGGAGCGAACACTGTCCGAGTTCAAGGAATGTGTCGTCCAGGTCTGGC
CTGGCCCCAACAAGCTCTCCGCCACAGGTCCCAACGGTGTCTCGAACGAA
GAACTGGCCAAGAGCAGTCCCGGCCGGCCCTTCGAGTTCCCCGACGGCTA
TAACCAAGTCTTTGGAGTGGATCGCTATAAGGTCGTCGAATCCCTGTTCG
ACGCCAAAGCTGCAATCCCGGACCCTGAATCGGCATTCCCCGCACCGACG
CCGGCACAAACTGTGCCAGAGCTCATCAAGAATGCGCTGAACGGCGTCGA
CGTCGACATCCGCCCGCACTTGTTGGCTAACGTTGTCGTCACGGGCGCCT
CCAGCTTACTCTATGGTTTCACCGACCGTTTGAACCAGGAGCTCATGCAG
ATGTTCCCAGGTCCACGCGTTCGTATATCGGCCCCAGGAAACACCGCAGA
GCGGAAGTTTGGCTCTTGGATTGGTGGAAGTATCCTCGCCAGTCTGGGTA
CCTTCCATCAGATGTGGATCTCCAAGAAGGAGTTTGACGAACATGGTCCG
AATATCGTCGAGAAGCGCTGCAAGTAGATGAGGTGTCGGCGATTGTGCTC
GACCCCGGCTTCTCAACGACGCGAGCTGGCTTTGCAGGGGAGGACACACC
CAAATCCCTGATTCCGACATACTACGGAAAATATTCCTCAGATGGCCAGT
CGAAGTTGGTCTTCGGTGATGATATCTTTGTTACGCCCCGGCCCGGTCTG
TCGATTCACAACCCAATGAGTCGCGATGGAATCGTGGAGGACTGGGACAT
GGCAGAGAAAGTATGGGAATACGCCTTTATTTCGCGCCTGACGGGCCCAA
AGCCCGGAAATCCCCTACAGAACGGATTGAACGACGTGCCGGAGGGCGAA
TTATCTACAGAAATGGAAGGGGTCGAAACTGAGGAGAAGCTGCTTGCTGA
TAGCCCGCTGCTGATGTCGGAGCCCGGCTGGAATCCCACGAAATCGCGCG
AGAAGACTATCGAGCTTGCCATGGAGAAGTGGGGAACCCCAGCCTTCTAT
CTAGCCAGGAATGGTGTCCTTTCAGCATGAATCCCTCCATCCCACCCTCG
ACGGCTGAATATGGCGGAGCTTTGCGGCCGGCAAGGCATCCGCTCTTGTG
ATTGACATCGGCGCTTCTAACATTTCCGTAACCCCGGTTCACGACGGCAT
GATACTGAAGCGAGGAGTGCAGCACTCACCTCTCGGCGGTGATTATATCT
CATCTCAGATCCGCGCTCTCTTCAAGTCGAACGCCCCGCAGCCGATAACC
ATCACTCCTCATTACCTGATCTCGTCCAAGACAGCAGTCGATGCCGGCCA
ACCCCCGCAAGCTAAATACAAGACTTTCCCCCCCGACAGAGCTCCTGACG
CATCTTACAGAACCCTTCTCGAGGAGCGAACACTGTCCGAGTTCAAGGAA
TGTGTCGTCCAGGTCTGGCCTGGCCCCAACAAGCTCTCCGCCACAGGTCC
CAACGGTGTCTCGAACGAAGAACTGGCCAAGAGCAGTCCCGGCCGGCCCT
TCGAGTTCCCCGACGGCTATAACCAAGTCTTTGGAGTGGATCGCTATAAG
GTCGTCGAATCCCTGTTCGACGCCAAAGCTGCAATCCCGGACCCTGAATC
GGCATTCCCCGCACCGACGCCGGCACAAACTGTGCCAGAGCTCATCAAGA
ATGCGCTGAACGGCGTCGACGTCGACATCCGCCCGCACTTGTTGGCTAAC
GTTGTCGTCACGGGCGCCTCCAGCTTACTCTATGGTTTCACCGACCGTTT
GAACCAGGAGCTCATGCAGATGTTCCCAGGTCCACGCGTTCGTATATCGG
CCCCAGGAAACACCGCAGAGCGGAAGTTTGGCTCTTGGATTGGTGGAAGT
ATCCTCGCCAGTCTGGGTACCTTCCATCAGATGTGGATCTCCAAGAAGGA
GTTTGACGAACATGGTCCGAATATCGTCGAGAAGCGCTGCAAGTAGATGA
GGTGTCGGCGATTGTGCTCGACCCCGGCTTCTCAACGACGCGAGCTGGCT
TTGCAGGGGAGGACACACCCAAATCCCTGATTCCGACATACTACGGAAAA
TATTCCTCAGATGGCCAGTCGAAGTTGGTCTTCGGTGATGATATCTTTGT
TACGCCCCGGCCCGGTCTGTCGATTCACAACCCAATGAGTCGCGATGGAA
TCGTGGAGGACTGGGACATGGCAGAGAAAGTATGGGAATACGCCTTTATT
TCGCGCCTGACGGGCCCAAAGCCCGGAAATCCCCTACAGAACGGATTGAA
CGACGTGCCGGAGGGCGAATTATCTACAGAAATGGAAGGGGTCGAAACTG
AGGAGAAGCTGCTTGCTGATAGCCCGCTGCTGATGTCGGAGCCCGGCTGG
AATCCCACGAAATCGCGCGAGAAGACTATCGAGCTTGCCATGGAGAAGTG
GGGAACCCCAGCCTTCTATCTAGCCAGGAATGGTGTCCTTTCAGCATGAA
TCCCTCCATCCCACCCTCGACGGCTGAATATGGCGGAGCTTTGCGGCCGG
CAAGGCATCCGCTCTTGTGATTGACATCGGCGCTTCTAACATTTCCGTAA
CCCCGGTTCACGACGGCATGATACTGAAGCGAGGAGTGCAGCACTCACCT
CTCGGCGGTGATTATATCTCATCTCAGATCCGCGCTCTCTTCAAGTCGAA
CGCCCCGCAGCCGATAACCATCACTCCTCATTACCTGATCTCGTCCAAGA
CAGCAGTCGATGCCGGCCAACCCCCGCAAGCTAAATACAAGACTTTCCCC
CCCGACAGAGCTCCTGACGCATCTTACAGAACCCTTCTCGAGGAGCGAAC
ACTGTCCGAGTTCAAGGAATGTGTCGTCCAGGTCTGGCCTGGCCCCAACA
AGCTCTCCGCCACAGGTCCCAACGGTGTCTCGAACGAAGAACTGGCCAAG
AGCAGTCCCGGCCGGCCCTTCGAGTTCCCCGACGGCTATAACCAAGTCTT
TGGAGTGGATCGCTATAAGGTCGTCGAATCCCTGTTCGACGCCAAAGCTG
CAATCCCGGACCCTGAATCGGCATTCCCCGCACCGACGCCGGCACAAACT
GTGCCAGAGCTCATCAAGAATGCGCTGAACGGCGTCGACGTCGACATCCG
CCCGCACTTGTTGGCTAACGTTGTCGTCACGGGCGCCTCCAGCTTACTCT
ATGGTTTCACCGACCGTTTGAACCAGGAGCTCATGCAGATGTTCCCAGGT
CCACGCGTTCGTATATCGGCCCCAGGAAACACCGCAGAGCGGAAGTTTGG
CTCTTGGATTGGTGGAAGTATCCTCGCCAGTCTGGGTACCTTCCATCAGA
TGTGGATCTCCAAGAAGGAGTTTGACGAACATGGTCCGAATATCGTCGAG
AAGCGCTGCAAGTAGATGAGGTGTCGGCGATTGTGCTCGACCCCGGCTTC
TCAACGACGCGAGCTGGCTTTGCAGGGGAGGACACACCCAAATCCCTGAT
TCCGACATACTACGGAAAATATTCCTCAGATGGCCAGTCGAAGTTGGTCT
TCGGTGATGATATCTTTGTTACGCCCCGGCCCGGTCTGTCGATTCACAAC
CCAATGAGTCGCGATGGAATCGTGGAGGACTGGGACATGGCAGAGAAAGT
ATGGGAATACGCCTTTATTTCGCGCCTGACGGGCCCAAAGCCCGGAAATC
CCCTACAGAACGGATTGAACGACGTGCCGGAGGGCGAATTATCTACAGAA
ATGGAAGGGGTCGAAACTGAGGAGAAGCTGCTTGCTGATAGCCCGCTGCT
GATGTCGGAGCCCGGCTGGAATCCCACGAAATCGCGCGAGAAGACTATCG
AGCTTGCCATGGAGAAGTGGGGAACCCCAGCCTTCTATCTAGCCAGGAAT
GGTGTCCTTTCAGCATGAATCCCTCCATCCCACCCTCGACGGCTGAATAT
GGCGGAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_005392-T1.utr5p1 | KJC3_005392-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG09262MOO |
| DBxref | InterPro:IPR043129 |
| DBxref | InterPro:IPR004000 |
| DBxref | PFAM:PF00022 |
| Product | NuA4 histone acetyltransferase subunit |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch4 | supercontig | ch4:2593650..2595470 - |
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