You are here

Home

KJC3_005399-T1, KJC3_005399-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_005399-T1
Unique NameKJC3_005399-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch4:2610932..2613503+

Legend: five_prime_UTRexonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_005399-T1 ID=KJC3_005399-T1|Name=KJC3_005399-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2572bp|location=Sequence derived from alignment at ch4:2610932..2613503+ (Aspergillus niger KJC3)
GAAGAATACTGAATATTGTGGCATGACAGGCCACCATCTCCAATTACAAT
TACCCTGCTTCCCTCCGTGTGGAGATCTGTAAGCCAAAAGTAGATCAAAC
CGACGTGGTTTTCGGGGTGTTGTTGCTAGGAAACCCTGCCAGCTCTGGAC
GCAGCACCGAATCCACGTGCCGCAGCCCTCCCCGCACTCGGCTTCTGTGC
TCTCTCCATGTTATTCGATCCCCAAGACCTGCTCAATTGATGCTATCGTT
GCCTCCGCACTCCTCAAAAACGCAATGGCTGCGAGGAAGGGCCAACAGGT
GAGTCTTAAACCCCAGCCCCATTATATTCTGTACGCAATAGCTGGCTAAT
CCAATCGCTTTTGATTCTCTGAAGGAGATGGTCCAGGTTGGTTCGTACCT
CTCACACCCCCCGTCTTTTGGGTTCCAGATCCAGTGGCTGATATAGCTCC
CCCACTTCCAATGAACAGACCGTGCTGAGTATGTTTCACTCCCCATCGTT
CGATTTCTTTTCATGAGCCATTGAGGGCATTTCATAGCAATGACTTTTGA
GTTTCTCGCGCTAACCCTCCCCTGAAAGGCGGGTGAATTCGCCGTTTTGG
AAGGGAAGATCAGTATCCCATAATCAAGCGGCCTCGACGCAACATGAGCA
AAACACGGTTGTTGGCGCCTCATACTCGCACGCTGACATACTAAAGTTAG
TACATTGCATGCCATTGGGTGTTTATCTCTCTTCGTGCTTGGCTCTTTCA
TTTCACTGACCTGTGCGCCTCCCCCAATAGAGGGATCTCGCAGCAGCATG
CGCGCCCGCGGACACCGCCTCGGTCATCCTCTGCCAATATCCAACACACG
TCTCTTTCACCCCTACGATCGGGCGGGTGGTCCACGTCCCCTCATACTAC
TTCCTACTCTGACATAATGAACGGCGGGATCGAATCCTGGGGTTCTGACC
GATTGGGAGAAGATTACGAAGATGACGACGAGGAGGAAGACATCGTCTAT
GATGATGATGAGGACGAGTTCGGTCTCCCTAGTATTACCAGCATGCGGAA
GAAACAGTCGCAGCGAGTTGGCAGTTCTCAGCTTAAGCCTGCTGATCCAG
GTGGGGGGCTTGCTAGTACCGCCTCATCACTCGGGGTTGGCTTGGGAACC
AATCGGCAACGGGCCAATAGTTCGGATATCGCTGAGGAGCGCGGCGTACC
TATGTATCCTACGGCTGGAACTGGAGAGGGTAAGATACTGCGACCTCAGT
ATAAAGAAATCCTGAAAGGTATGATGTGTCCTTATAATGCTGGAACGTGC
TGACCTCTTTCCAGACCCCGCCAACGCCTTGAACCTCATTAACCACGCGC
CTCCTCCCAAAAATGCATCGCCTAAAGAGATGGATATGTACAACAGCCGC
ATTTCGAGAATTAACAAGTTTAAACGTCTTCTCCAGACAAGCACCGTTCC
TTTGTCGGAGCTGAGGAACCTGGCCTGGTCAGGGGTCCCCGATGAAGTTC
GCGCGATGACCTGGCAACTGCTCCTTGGATACCTCCCCACAAATAGTGAA
AGGCGCATTCCTACCCTCGAAAGAAAGCGCAAGGAATATTTGGACGGGGT
TCGACAAGCCTTTGAACGTGGGAGTGCGGCTGGTTCTGGAAATCCACCTT
CGTCGAGCGCTGGGCGTGGCAGGGGCTTGGATGAGGCAATATGGCATCAA
ATCAGCATTGATGTTCCTCGGACTAGCCCTCACATTCAACTTTACAGCTA
CGAAGCTACTCAACGATCGTTGGAAAAGATCCTCTACGTTTGGGCTATCC
GACACCCGGCGAGCGGATACGTGCAAGGTATCAATGACCTCGTCACACCG
TTCTGGCAGGTCTTTTTGGGCACGTACGTAACTGATCTCAATGTTGAGAG
GGGCATGGATCCTGGCCAGTTGCCCAGGAGTGTGCTGGATGCTGTGGAGG
CAGATACATTTTGGTGTCTTACCAAGCTACTCGACGGTATCCAGGACAAT
TATATTTATGCTCAACCGGGTATTCACCGACAAGTTAGGGCATTGCGTGA
CTTGACAATGCGCATTGACTCTACACTGGCCAAGCATTTGGAGCAGGAGG
GAGTAGAGTTCATGCAGTTCAGTTTTCGGTGGATGAACTGTCTTCTTATG
CGGGAGATGAGTGTACAGAATACTATACGGATGTGGGACACGTATATGGT
GAGGCAAACCAACTATCCCTATTGCGCCAGATGTAGATCAGGTATACTGA
CCGTTCCATTAGGCAGAGGAGCAAGGTTTCTCAAGGTTTCATCTATACGT
TTGTGCAGCCTTCCTTGTGAAATGGTCAGACCAGCTGGTGAAGATGGATT
TCCAGGTGGGTATAATTCTAAGGCTCTGGATACCGTACAGTAAATGCTAA
ACGACAATAGGAGATAATGATGTTTCTGCAAGCACTTCCCACAAAGGATT
GGACGGATAAAGATGTGGAACTCTTGCTGAGCGAAGCATTCATCTGGCAA
AGTCTCTTCCAGGACTCAAGGGCTCATCTTCGTCCGGCTGGAGAACGAAC
TCCAGAGGATGAACTGCAGTGA
back to top

Coding sequence (CDS) from alignment at ch4:2610932..2613503+

>KJC3_005399-T1 ID=KJC3_005399-T1|Name=KJC3_005399-T1|organism=Aspergillus niger KJC3|type=CDS|length=5964bp|location=Sequence derived from alignment at ch4:2610932..2613503+ (Aspergillus niger KJC3)
ATGAACGGCGGGATCGAATCCTGGGGTTCTGACCGATTGGGAGAAGATTA
CGAAGATGACGACGAGGAGGAAGACATCGTCTATGATGATGATGAGGACG
AGTTCGGTCTCCCTAGTATTACCAGCATGCGGAAGAAACAGTCGCAGCGA
GTTGGCAGTTCTCAGCTTAAGCCTGCTGATCCAGGTGGGGGGCTTGCTAG
TACCGCCTCATCACTCGGGGTTGGCTTGGGAACCAATCGGCAACGGGCCA
ATAGTTCGGATATCGCTGAGGAGCGCGGCGTACCTATGTATCCTACGGCT
GGAACTGGAGAGGGTAAGATACTGCGACCTCAGTATAAAGAAATCCTGAA
AGACCCCGCCAACGCCTTGAACCTCATTAACCACGCGCCTCCTCCCAAAA
ATGCATCGCCTAAAGAGATGGATATGTACAACAGCCGCATTTCGAGAATT
AACAAGTTTAAACGTCTTCTCCAGACAAGCACCGTTCCTTTGTCGGAGCT
GAGGAACCTGGCCTGGTCAGGGGTCCCCGATGAAGTTCGCGCGATGACCT
GGCAACTGCTCCTTGGATACCTCCCCACAAATAGTGAAAGGCGCATTCCT
ACCCTCGAAAGAAAGCGCAAGGAATATTTGGACGGGGTTCGACAAGCCTT
TGAACGTGGGAGTGCGGCTGGTTCTGGAAATCCACCTTCGTCGAGCGCTG
GGCGTGGCAGGGGCTTGGATGAGGCAATATGGCATCAAATCAGCATTGAT
GTTCCTCGGACTAGCCCTCACATTCAACTTTACAGCTACGAAGCTACTCA
ACGATCGTTGGAAAAGATCCTCTACGTTTGGGCTATCCGACACCCGGCGA
GCGGATACGTGCAAGGTATCAATGACCTCGTCACACCGTTCTGGCAGGTC
TTTTTGGGCACGTACGTAACTGATCTCAATGTTGAGAGGGGCATGGATCC
TGGCCAGTTGCCCAGGAGTGTGCTGGATGCTGTGGAGGCAGATACATTTT
GGTGTCTTACCAAGCTACTCGACGGTATCCAGGACAATTATATTTATGCT
CAACCGGGTATTCACCGACAAGTTAGGGCATTGCGTGACTTGACAATGCG
CATTGACTCTACACTGGCCAAGCATTTGGAGCAGGAGGGAGTAGAGTTCA
TGCAGTTCAGTTTTCGGTGGATGAACTGTCTTCTTATGCGGGAGATGAGT
GTACAGAATACTATACGGATGTGGGACACGTATATGGCAGAGGAGCAAGG
TTTCTCAAGGTTTCATCTATACGTTTGTGCAGCCTTCCTTGTGAAATGGT
CAGACCAGCTGGTGAAGATGGATTTCCAGGAGATAATGATGTTTCTGCAA
GCACTTCCCACAAAGGATTGGACGGATAAAGATGTGGAACTCTTGCTGAG
CGAAGCATTCATCTGGCAAAGTCTCTTCCAGGACTCAAGGGCTCATCTTC
GTCCGGCTGGAGAACGAACTCCAGAGGATGAACTGCAGTGAATGAACGGC
GGGATCGAATCCTGGGGTTCTGACCGATTGGGAGAAGATTACGAAGATGA
CGACGAGGAGGAAGACATCGTCTATGATGATGATGAGGACGAGTTCGGTC
TCCCTAGTATTACCAGCATGCGGAAGAAACAGTCGCAGCGAGTTGGCAGT
TCTCAGCTTAAGCCTGCTGATCCAGGTGGGGGGCTTGCTAGTACCGCCTC
ATCACTCGGGGTTGGCTTGGGAACCAATCGGCAACGGGCCAATAGTTCGG
ATATCGCTGAGGAGCGCGGCGTACCTATGTATCCTACGGCTGGAACTGGA
GAGGGTAAGATACTGCGACCTCAGTATAAAGAAATCCTGAAAGACCCCGC
CAACGCCTTGAACCTCATTAACCACGCGCCTCCTCCCAAAAATGCATCGC
CTAAAGAGATGGATATGTACAACAGCCGCATTTCGAGAATTAACAAGTTT
AAACGTCTTCTCCAGACAAGCACCGTTCCTTTGTCGGAGCTGAGGAACCT
GGCCTGGTCAGGGGTCCCCGATGAAGTTCGCGCGATGACCTGGCAACTGC
TCCTTGGATACCTCCCCACAAATAGTGAAAGGCGCATTCCTACCCTCGAA
AGAAAGCGCAAGGAATATTTGGACGGGGTTCGACAAGCCTTTGAACGTGG
GAGTGCGGCTGGTTCTGGAAATCCACCTTCGTCGAGCGCTGGGCGTGGCA
GGGGCTTGGATGAGGCAATATGGCATCAAATCAGCATTGATGTTCCTCGG
ACTAGCCCTCACATTCAACTTTACAGCTACGAAGCTACTCAACGATCGTT
GGAAAAGATCCTCTACGTTTGGGCTATCCGACACCCGGCGAGCGGATACG
TGCAAGGTATCAATGACCTCGTCACACCGTTCTGGCAGGTCTTTTTGGGC
ACGTACGTAACTGATCTCAATGTTGAGAGGGGCATGGATCCTGGCCAGTT
GCCCAGGAGTGTGCTGGATGCTGTGGAGGCAGATACATTTTGGTGTCTTA
CCAAGCTACTCGACGGTATCCAGGACAATTATATTTATGCTCAACCGGGT
ATTCACCGACAAGTTAGGGCATTGCGTGACTTGACAATGCGCATTGACTC
TACACTGGCCAAGCATTTGGAGCAGGAGGGAGTAGAGTTCATGCAGTTCA
GTTTTCGGTGGATGAACTGTCTTCTTATGCGGGAGATGAGTGTACAGAAT
ACTATACGGATGTGGGACACGTATATGGCAGAGGAGCAAGGTTTCTCAAG
GTTTCATCTATACGTTTGTGCAGCCTTCCTTGTGAAATGGTCAGACCAGC
TGGTGAAGATGGATTTCCAGGAGATAATGATGTTTCTGCAAGCACTTCCC
ACAAAGGATTGGACGGATAAAGATGTGGAACTCTTGCTGAGCGAAGCATT
CATCTGGCAAAGTCTCTTCCAGGACTCAAGGGCTCATCTTCGTCCGGCTG
GAGAACGAACTCCAGAGGATGAACTGCAGTGAATGAACGGCGGGATCGAA
TCCTGGGGTTCTGACCGATTGGGAGAAGATTACGAAGATGACGACGAGGA
GGAAGACATCGTCTATGATGATGATGAGGACGAGTTCGGTCTCCCTAGTA
TTACCAGCATGCGGAAGAAACAGTCGCAGCGAGTTGGCAGTTCTCAGCTT
AAGCCTGCTGATCCAGGTGGGGGGCTTGCTAGTACCGCCTCATCACTCGG
GGTTGGCTTGGGAACCAATCGGCAACGGGCCAATAGTTCGGATATCGCTG
AGGAGCGCGGCGTACCTATGTATCCTACGGCTGGAACTGGAGAGGGTAAG
ATACTGCGACCTCAGTATAAAGAAATCCTGAAAGACCCCGCCAACGCCTT
GAACCTCATTAACCACGCGCCTCCTCCCAAAAATGCATCGCCTAAAGAGA
TGGATATGTACAACAGCCGCATTTCGAGAATTAACAAGTTTAAACGTCTT
CTCCAGACAAGCACCGTTCCTTTGTCGGAGCTGAGGAACCTGGCCTGGTC
AGGGGTCCCCGATGAAGTTCGCGCGATGACCTGGCAACTGCTCCTTGGAT
ACCTCCCCACAAATAGTGAAAGGCGCATTCCTACCCTCGAAAGAAAGCGC
AAGGAATATTTGGACGGGGTTCGACAAGCCTTTGAACGTGGGAGTGCGGC
TGGTTCTGGAAATCCACCTTCGTCGAGCGCTGGGCGTGGCAGGGGCTTGG
ATGAGGCAATATGGCATCAAATCAGCATTGATGTTCCTCGGACTAGCCCT
CACATTCAACTTTACAGCTACGAAGCTACTCAACGATCGTTGGAAAAGAT
CCTCTACGTTTGGGCTATCCGACACCCGGCGAGCGGATACGTGCAAGGTA
TCAATGACCTCGTCACACCGTTCTGGCAGGTCTTTTTGGGCACGTACGTA
ACTGATCTCAATGTTGAGAGGGGCATGGATCCTGGCCAGTTGCCCAGGAG
TGTGCTGGATGCTGTGGAGGCAGATACATTTTGGTGTCTTACCAAGCTAC
TCGACGGTATCCAGGACAATTATATTTATGCTCAACCGGGTATTCACCGA
CAAGTTAGGGCATTGCGTGACTTGACAATGCGCATTGACTCTACACTGGC
CAAGCATTTGGAGCAGGAGGGAGTAGAGTTCATGCAGTTCAGTTTTCGGT
GGATGAACTGTCTTCTTATGCGGGAGATGAGTGTACAGAATACTATACGG
ATGTGGGACACGTATATGGCAGAGGAGCAAGGTTTCTCAAGGTTTCATCT
ATACGTTTGTGCAGCCTTCCTTGTGAAATGGTCAGACCAGCTGGTGAAGA
TGGATTTCCAGGAGATAATGATGTTTCTGCAAGCACTTCCCACAAAGGAT
TGGACGGATAAAGATGTGGAACTCTTGCTGAGCGAAGCATTCATCTGGCA
AAGTCTCTTCCAGGACTCAAGGGCTCATCTTCGTCCGGCTGGAGAACGAA
CTCCAGAGGATGAACTGCAGTGAATGAACGGCGGGATCGAATCCTGGGGT
TCTGACCGATTGGGAGAAGATTACGAAGATGACGACGAGGAGGAAGACAT
CGTCTATGATGATGATGAGGACGAGTTCGGTCTCCCTAGTATTACCAGCA
TGCGGAAGAAACAGTCGCAGCGAGTTGGCAGTTCTCAGCTTAAGCCTGCT
GATCCAGGTGGGGGGCTTGCTAGTACCGCCTCATCACTCGGGGTTGGCTT
GGGAACCAATCGGCAACGGGCCAATAGTTCGGATATCGCTGAGGAGCGCG
GCGTACCTATGTATCCTACGGCTGGAACTGGAGAGGGTAAGATACTGCGA
CCTCAGTATAAAGAAATCCTGAAAGACCCCGCCAACGCCTTGAACCTCAT
TAACCACGCGCCTCCTCCCAAAAATGCATCGCCTAAAGAGATGGATATGT
ACAACAGCCGCATTTCGAGAATTAACAAGTTTAAACGTCTTCTCCAGACA
AGCACCGTTCCTTTGTCGGAGCTGAGGAACCTGGCCTGGTCAGGGGTCCC
CGATGAAGTTCGCGCGATGACCTGGCAACTGCTCCTTGGATACCTCCCCA
CAAATAGTGAAAGGCGCATTCCTACCCTCGAAAGAAAGCGCAAGGAATAT
TTGGACGGGGTTCGACAAGCCTTTGAACGTGGGAGTGCGGCTGGTTCTGG
AAATCCACCTTCGTCGAGCGCTGGGCGTGGCAGGGGCTTGGATGAGGCAA
TATGGCATCAAATCAGCATTGATGTTCCTCGGACTAGCCCTCACATTCAA
CTTTACAGCTACGAAGCTACTCAACGATCGTTGGAAAAGATCCTCTACGT
TTGGGCTATCCGACACCCGGCGAGCGGATACGTGCAAGGTATCAATGACC
TCGTCACACCGTTCTGGCAGGTCTTTTTGGGCACGTACGTAACTGATCTC
AATGTTGAGAGGGGCATGGATCCTGGCCAGTTGCCCAGGAGTGTGCTGGA
TGCTGTGGAGGCAGATACATTTTGGTGTCTTACCAAGCTACTCGACGGTA
TCCAGGACAATTATATTTATGCTCAACCGGGTATTCACCGACAAGTTAGG
GCATTGCGTGACTTGACAATGCGCATTGACTCTACACTGGCCAAGCATTT
GGAGCAGGAGGGAGTAGAGTTCATGCAGTTCAGTTTTCGGTGGATGAACT
GTCTTCTTATGCGGGAGATGAGTGTACAGAATACTATACGGATGTGGGAC
ACGTATATGGCAGAGGAGCAAGGTTTCTCAAGGTTTCATCTATACGTTTG
TGCAGCCTTCCTTGTGAAATGGTCAGACCAGCTGGTGAAGATGGATTTCC
AGGAGATAATGATGTTTCTGCAAGCACTTCCCACAAAGGATTGGACGGAT
AAAGATGTGGAACTCTTGCTGAGCGAAGCATTCATCTGGCAAAGTCTCTT
CCAGGACTCAAGGGCTCATCTTCGTCCGGCTGGAGAACGAACTCCAGAGG
ATGAACTGCAGTGA
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_005399KJC3_005399Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005399-T1KJC3_005399-T1-proteinAspergillus niger KJC3polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005399-T1.utr5p1KJC3_005399-T1.utr5p1Aspergillus niger KJC3five_prime_UTR
KJC3_005399-T1.utr5p2KJC3_005399-T1.utr5p2Aspergillus niger KJC3five_prime_UTR
KJC3_005399-T1.utr5p3KJC3_005399-T1.utr5p3Aspergillus niger KJC3five_prime_UTR
KJC3_005399-T1.utr5p4KJC3_005399-T1.utr5p4Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005399-T1.exon1KJC3_005399-T1.exon1Aspergillus niger KJC3exon
KJC3_005399-T1.exon2KJC3_005399-T1.exon2Aspergillus niger KJC3exon
KJC3_005399-T1.exon3KJC3_005399-T1.exon3Aspergillus niger KJC3exon
KJC3_005399-T1.exon4KJC3_005399-T1.exon4Aspergillus niger KJC3exon
KJC3_005399-T1.exon5KJC3_005399-T1.exon5Aspergillus niger KJC3exon
KJC3_005399-T1.exon6KJC3_005399-T1.exon6Aspergillus niger KJC3exon
KJC3_005399-T1.exon7KJC3_005399-T1.exon7Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005399-T1.cdsKJC3_005399-T1.cdsAspergillus niger KJC3CDS


Properties
Property NameValue
NoteBUSCO:EOG09261YLQ
DBxrefInterPro:IPR035969
DBxrefInterPro:IPR000195
DBxrefPFAM:PF00566
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch4supercontigch4:2610932..2613503 +
Powered by Drupal