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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:2619462..2621297- Legend: exonfive_prime_UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_005402-T1 ID=KJC3_005402-T1|Name=KJC3_005402-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1836bp|location=Sequence derived from alignment at ch4:2619462..2621297- (Aspergillus niger KJC3)
TTCCCAACTTCCACTTCCACCTCGAACGTCCTCCTCCGTCTGGCCTGCCT
TTCCCCTTCTCCTTCAACCCCCATCGCCCATCAATCCGCTTGTCATTGCC
TATCCGTCTCGCGTGTCGACCACACCTTTTGACACGCTTTGCTCCGATCG
TTTTCGCCTCCGGTTTCCTGGATCTGGTATGACTCGCGCTTCATGAAGGC
GTAGTTCTCCCCACCCCCGGCTTCGCGCAGCCCGTCGCGCTTCGGCGAGC
CCTCGCAAACCATGCAGATCGATCCGGCTGCTCTGAGTCGGACAGACTCG
GCCTCCACTACAATAGCCTCGTCTAAAAGCACTGCTCCAAATGCTCCGCC
AACGCAGAAGTCTACCAAAGCCCTCATTTCCGTGCCGCGCCTGGATCTTG
AGCCCATCTACACCGAGCTGAAGGCCGCCATCGGCGACAATTGGGCTGAC
TACAAGGAAGCTACTTCCCTCTTTCTTCTAGGTATGTCTGTGCATTGTCA
CGTCTATCCCCATCTTCTTGCGAGGACCTATCTATATCATTGTTCTTGAG
TTTCTGTCTCTTATCTTACAATAAGCCTCGGTCCCACTTTTAACCTGAAT
GCGTATGCTGACGCCGCCCTTCTCCCCCAACGAACAGGACAACTGAACCA
AAGCGAATTGTCGTCGCGAGTCGATCATATAATATGCGCCGATCAAAAAA
CCGAGCATCTACATAACAATTTCGTATGCGCAATCATTGGCAATCTTACA
CGGGATCTTCCGGATCATGGTGTCGCAAGTTGGGTGTCGGCGAACGACAA
GCCGTCCGTCGTGTCAAAGCCGACATCGGGCGATGCCGCTGAACAAAGGC
TCAAGACGGAGGTTATGCAACTCCCTCCCCGGGATCGTCGACGAATCAAA
GCTATTCCCGAGGTATGCGACCTGCTCCAGAGATGCGACAGCCTCCCCCC
TGAGATGTGCGCGTACAAGGCTGACCATGGATCTATACAAAGCGTGACCC
CCATGAACTGTCGCCGAACGAACTGGAGGAGTATCATCTGGCGAAACAGA
TCAAGTTGCCAAGTCAAGTACCAGCTAGTGCGGGCGGGTTGAATAAGACA
AGTAGGTTCATGCCAGAGATCTCGTCTGTTTTTCGTCTGCTCGACCGAAT
GATGCTAATCATCCTGGATCTCGGTAGACTGGGAACTCGAAATTCGAAAA
CGATATGCACAACCTCTGGCGTCAGAGTCCGGCGAATTCCCGGACGCCGA
ATCTATCCACGCACGTATGGTTCCCATCTGCTACGAAGAATCCATTGTCA
GTGGTGCAAGCCTTCCCTGTGCCGAGTTCATGGCGATCGCAACGGAGACT
TTTGTCAAGGAAGTTCTATCCGTAGTGTTCTCACGGACGAGATCGAACGG
CCCTTCAGGGACAATAAACGGCATGATGATGCGCAAGTACCGACAGCAGC
TCGAAAGTGAGGAATTGGCTTTCACGCGAGGAGAGATCGTCAAGGATAGC
GCGACCGGTCTTCTCCCAGTCGAGGCCAAGGAGGCAAGCACCCGAAAACC
CTTGGGCGTGCGAGATCTCCGATTATCCTTGGAACTCGGCGGCGGTGTCC
TGAGTCATATGCCTCTACTCGTGGATCAAATCATGGGTGGGTATCTCGAG
GATGAGTTAGAAACAGACAAACAGGACCGGGTCGAGGAGGCGGTCGACGT
CCCCGACGCGAAGCCCGACAGTTTCATGGACGAAATGGACGTGGACGAGG
CAAAATTCGACTGGGAAGGCGGGACAGTCACGGATCGGGAGCAATTGGGT
GCCTTGCTGGATGAATGTTTGTCGATGGCCTCGTGA back to topCoding sequence (CDS) from alignment at ch4:2619462..2621297- >KJC3_005402-T1 ID=KJC3_005402-T1|Name=KJC3_005402-T1|organism=Aspergillus niger KJC3|type=CDS|length=5052bp|location=Sequence derived from alignment at ch4:2619462..2621297- (Aspergillus niger KJC3)
ACTGGGAACTCGAAATTCGAAAACGATATGCACAACCTCTGGCGTCAGAG
TCCGGCGAATTCCCGGACGCCGAATCTATCCACGCACGTATGGTTCCCAT
CTGCTACGAAGAATCCATTGTCAGTGGTGCAAGCCTTCCCTGTGCCGAGT
TCATGGCGATCGCAACGGAGACTTTTGTCAAGGAAGTTCTATCCGTAGTG
TTCTCACGGACGAGATCGAACGGCCCTTCAGGGACAATAAACGGCATGAT
GATGCGCAAGTACCGACAGCAGCTCGAAAGTGAGGAATTGGCTTTCACGC
GAGGAGAGATCGTCAAGGATAGCGCGACCGGTCTTCTCCCAGTCGAGGCC
AAGGAGGCAAGCACCCGAAAACCCTTGGGCGTGCGAGATCTCCGATTATC
CTTGGAACTCGGCGGCGGTGTCCTGAGTCATATGCCTCTACTCGTGGATC
AAATCATGGGTGGGTATCTCGAGGATGAGTTAGAAACAGACAAACAGGAC
CGGGTCGAGGAGGCGGTCGACGTCCCCGACGCGAAGCCCGACAGTTTCAT
GGACGAAATGGACGTGGACGAGGCAAAATTCGACTGGGAAGGCGGGACAG
TCACGGATCGGGAGCAATTGGGTGCCTTGCTGGATGAATGTTTGTCGATG
GCCTCGTGACGTGACCCCCATGAACTGTCGCCGAACGAACTGGAGGAGTA
TCATCTGGCGAAACAGATCAAGTTGCCAAGTCAAGTACCAGCTAGTGCGG
GCGGGTTGAATAAGACAAGACAACTGAACCAAAGCGAATTGTCGTCGCGA
GTCGATCATATAATATGCGCCGATCAAAAAACCGAGCATCTACATAACAA
TTTCGTATGCGCAATCATTGGCAATCTTACACGGGATCTTCCGGATCATG
GTGTCGCAAGTTGGGTGTCGGCGAACGACAAGCCGTCCGTCGTGTCAAAG
CCGACATCGGGCGATGCCGCTGAACAAAGGCTCAAGACGGAGGTTATGCA
ACTCCCTCCCCGGGATCGTCGACGAATCAAAGCTATTCCCGAGATGCAGA
TCGATCCGGCTGCTCTGAGTCGGACAGACTCGGCCTCCACTACAATAGCC
TCGTCTAAAAGCACTGCTCCAAATGCTCCGCCAACGCAGAAGTCTACCAA
AGCCCTCATTTCCGTGCCGCGCCTGGATCTTGAGCCCATCTACACCGAGC
TGAAGGCCGCCATCGGCGACAATTGGGCTGACTACAAGGAAGCTACTTCC
CTCTTTCTTCTAGACTGGGAACTCGAAATTCGAAAACGATATGCACAACC
TCTGGCGTCAGAGTCCGGCGAATTCCCGGACGCCGAATCTATCCACGCAC
GTATGGTTCCCATCTGCTACGAAGAATCCATTGTCAGTGGTGCAAGCCTT
CCCTGTGCCGAGTTCATGGCGATCGCAACGGAGACTTTTGTCAAGGAAGT
TCTATCCGTAGTGTTCTCACGGACGAGATCGAACGGCCCTTCAGGGACAA
TAAACGGCATGATGATGCGCAAGTACCGACAGCAGCTCGAAAGTGAGGAA
TTGGCTTTCACGCGAGGAGAGATCGTCAAGGATAGCGCGACCGGTCTTCT
CCCAGTCGAGGCCAAGGAGGCAAGCACCCGAAAACCCTTGGGCGTGCGAG
ATCTCCGATTATCCTTGGAACTCGGCGGCGGTGTCCTGAGTCATATGCCT
CTACTCGTGGATCAAATCATGGGTGGGTATCTCGAGGATGAGTTAGAAAC
AGACAAACAGGACCGGGTCGAGGAGGCGGTCGACGTCCCCGACGCGAAGC
CCGACAGTTTCATGGACGAAATGGACGTGGACGAGGCAAAATTCGACTGG
GAAGGCGGGACAGTCACGGATCGGGAGCAATTGGGTGCCTTGCTGGATGA
ATGTTTGTCGATGGCCTCGTGACGTGACCCCCATGAACTGTCGCCGAACG
AACTGGAGGAGTATCATCTGGCGAAACAGATCAAGTTGCCAAGTCAAGTA
CCAGCTAGTGCGGGCGGGTTGAATAAGACAAGACAACTGAACCAAAGCGA
ATTGTCGTCGCGAGTCGATCATATAATATGCGCCGATCAAAAAACCGAGC
ATCTACATAACAATTTCGTATGCGCAATCATTGGCAATCTTACACGGGAT
CTTCCGGATCATGGTGTCGCAAGTTGGGTGTCGGCGAACGACAAGCCGTC
CGTCGTGTCAAAGCCGACATCGGGCGATGCCGCTGAACAAAGGCTCAAGA
CGGAGGTTATGCAACTCCCTCCCCGGGATCGTCGACGAATCAAAGCTATT
CCCGAGATGCAGATCGATCCGGCTGCTCTGAGTCGGACAGACTCGGCCTC
CACTACAATAGCCTCGTCTAAAAGCACTGCTCCAAATGCTCCGCCAACGC
AGAAGTCTACCAAAGCCCTCATTTCCGTGCCGCGCCTGGATCTTGAGCCC
ATCTACACCGAGCTGAAGGCCGCCATCGGCGACAATTGGGCTGACTACAA
GGAAGCTACTTCCCTCTTTCTTCTAGACTGGGAACTCGAAATTCGAAAAC
GATATGCACAACCTCTGGCGTCAGAGTCCGGCGAATTCCCGGACGCCGAA
TCTATCCACGCACGTATGGTTCCCATCTGCTACGAAGAATCCATTGTCAG
TGGTGCAAGCCTTCCCTGTGCCGAGTTCATGGCGATCGCAACGGAGACTT
TTGTCAAGGAAGTTCTATCCGTAGTGTTCTCACGGACGAGATCGAACGGC
CCTTCAGGGACAATAAACGGCATGATGATGCGCAAGTACCGACAGCAGCT
CGAAAGTGAGGAATTGGCTTTCACGCGAGGAGAGATCGTCAAGGATAGCG
CGACCGGTCTTCTCCCAGTCGAGGCCAAGGAGGCAAGCACCCGAAAACCC
TTGGGCGTGCGAGATCTCCGATTATCCTTGGAACTCGGCGGCGGTGTCCT
GAGTCATATGCCTCTACTCGTGGATCAAATCATGGGTGGGTATCTCGAGG
ATGAGTTAGAAACAGACAAACAGGACCGGGTCGAGGAGGCGGTCGACGTC
CCCGACGCGAAGCCCGACAGTTTCATGGACGAAATGGACGTGGACGAGGC
AAAATTCGACTGGGAAGGCGGGACAGTCACGGATCGGGAGCAATTGGGTG
CCTTGCTGGATGAATGTTTGTCGATGGCCTCGTGACGTGACCCCCATGAA
CTGTCGCCGAACGAACTGGAGGAGTATCATCTGGCGAAACAGATCAAGTT
GCCAAGTCAAGTACCAGCTAGTGCGGGCGGGTTGAATAAGACAAGACAAC
TGAACCAAAGCGAATTGTCGTCGCGAGTCGATCATATAATATGCGCCGAT
CAAAAAACCGAGCATCTACATAACAATTTCGTATGCGCAATCATTGGCAA
TCTTACACGGGATCTTCCGGATCATGGTGTCGCAAGTTGGGTGTCGGCGA
ACGACAAGCCGTCCGTCGTGTCAAAGCCGACATCGGGCGATGCCGCTGAA
CAAAGGCTCAAGACGGAGGTTATGCAACTCCCTCCCCGGGATCGTCGACG
AATCAAAGCTATTCCCGAGATGCAGATCGATCCGGCTGCTCTGAGTCGGA
CAGACTCGGCCTCCACTACAATAGCCTCGTCTAAAAGCACTGCTCCAAAT
GCTCCGCCAACGCAGAAGTCTACCAAAGCCCTCATTTCCGTGCCGCGCCT
GGATCTTGAGCCCATCTACACCGAGCTGAAGGCCGCCATCGGCGACAATT
GGGCTGACTACAAGGAAGCTACTTCCCTCTTTCTTCTAGACTGGGAACTC
GAAATTCGAAAACGATATGCACAACCTCTGGCGTCAGAGTCCGGCGAATT
CCCGGACGCCGAATCTATCCACGCACGTATGGTTCCCATCTGCTACGAAG
AATCCATTGTCAGTGGTGCAAGCCTTCCCTGTGCCGAGTTCATGGCGATC
GCAACGGAGACTTTTGTCAAGGAAGTTCTATCCGTAGTGTTCTCACGGAC
GAGATCGAACGGCCCTTCAGGGACAATAAACGGCATGATGATGCGCAAGT
ACCGACAGCAGCTCGAAAGTGAGGAATTGGCTTTCACGCGAGGAGAGATC
GTCAAGGATAGCGCGACCGGTCTTCTCCCAGTCGAGGCCAAGGAGGCAAG
CACCCGAAAACCCTTGGGCGTGCGAGATCTCCGATTATCCTTGGAACTCG
GCGGCGGTGTCCTGAGTCATATGCCTCTACTCGTGGATCAAATCATGGGT
GGGTATCTCGAGGATGAGTTAGAAACAGACAAACAGGACCGGGTCGAGGA
GGCGGTCGACGTCCCCGACGCGAAGCCCGACAGTTTCATGGACGAAATGG
ACGTGGACGAGGCAAAATTCGACTGGGAAGGCGGGACAGTCACGGATCGG
GAGCAATTGGGTGCCTTGCTGGATGAATGTTTGTCGATGGCCTCGTGACG
TGACCCCCATGAACTGTCGCCGAACGAACTGGAGGAGTATCATCTGGCGA
AACAGATCAAGTTGCCAAGTCAAGTACCAGCTAGTGCGGGCGGGTTGAAT
AAGACAAGACAACTGAACCAAAGCGAATTGTCGTCGCGAGTCGATCATAT
AATATGCGCCGATCAAAAAACCGAGCATCTACATAACAATTTCGTATGCG
CAATCATTGGCAATCTTACACGGGATCTTCCGGATCATGGTGTCGCAAGT
TGGGTGTCGGCGAACGACAAGCCGTCCGTCGTGTCAAAGCCGACATCGGG
CGATGCCGCTGAACAAAGGCTCAAGACGGAGGTTATGCAACTCCCTCCCC
GGGATCGTCGACGAATCAAAGCTATTCCCGAGATGCAGATCGATCCGGCT
GCTCTGAGTCGGACAGACTCGGCCTCCACTACAATAGCCTCGTCTAAAAG
CACTGCTCCAAATGCTCCGCCAACGCAGAAGTCTACCAAAGCCCTCATTT
CCGTGCCGCGCCTGGATCTTGAGCCCATCTACACCGAGCTGAAGGCCGCC
ATCGGCGACAATTGGGCTGACTACAAGGAAGCTACTTCCCTCTTTCTTCT
AG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0070461 | SAGA-type complex |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_005402-T1.utr5p1 | KJC3_005402-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR024738 |
| DBxref | PFAM:PF12767 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch4 | supercontig | ch4:2619462..2621297 - |
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