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KJC3_005405-T1, KJC3_005405-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_005405-T1
Unique NameKJC3_005405-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch4:2628143..2629262-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_005405-T1 ID=KJC3_005405-T1|Name=KJC3_005405-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1120bp|location=Sequence derived from alignment at ch4:2628143..2629262- (Aspergillus niger KJC3)
GCTTCATCACCCCGAGCCTTTTCTCTCCGGATTGTCATTCTCCTCCCCAC
TCTTTGGCCATCTCGCTGTCTCAGTATGGCTCTTCATCTCTTTTCGTGGT
CGCCTTTGCGCACCGTTGGCTCAGCCTTTGGGTCGGTGTCTGCTGCTGCT
AGTGTTGCTTGTCGCTGGAATTCGACGGCTGCTCCGAATCCCGCTCCTCA
GCGTGGCCCCAGATCTCGGTGTAAGTGATTGTACTATTCAGTCTGACTTT
CTACCCGTTTCATAGACCGAACTTGGGGGGAACCTATTTCAATCATATCC
CCTTCTATTGACTTTTCGCTAATCGGTGGCTTCAACGCAGCTCCCAAAGT
GTACAACCGCCGCCGTGGACCAGTGGACCGCCGCCGATTTCTCGAGGAGC
AGCGGGCTCAGAGTGAGAGCAGGGCTTTGGAGAGGTTCCAGACGCGTGAA
TGGAAAGCCGGTGATCTCTATGCCCCTCATGATCTCAGCCCGGCAGAGAT
GAAGAAATGGAGGAAGCGTTACAGTCCCTCGACTGATGCCTTTGACGCCC
TGAACCTGAACCCCCTGGATTTGTATAAGGTAAGCCAACGTATCATGGAC
TTTTGGGAAAGAAAGAAGATGGTTCTGTCTCGCAATCCATGCTGATCGCT
GATAATTCGTGCTTCGCAGAACTTCTCTGTTATGTCGGAATATATCACCT
CGATGGGTCGGATAAAGCACAGAAACATGACGGGTCTGCGGCCCGTCAAC
CAGCGCAAGATTTCCAAGGCTATCCGGAGAGCTGTTGGTCTCGGTCTCAT
GCCCAGTGTTCACCGACACCCGGAAGTTCTGGCGGCCGAAGCAAGGTCGC
GGATGGAGGGAGGAAGTGGCTACTGAATAGAGTTCCTCTGTATAACATCG
GTATAGGGTCACGGACTGGACTCGGGTTGCTTTTGATATGATAGTTCTTT
TCTTCCTCAGCTTTTGAACTCCTGGTGTTTTTCTTTTCTTTTCTTTTCTT
TTCTCTTTTCTTTTACTGCTAGCCAGACAGCCTTGACGGGATGGCCTATG
TACAACTACGACTATTTACCACCACCATTCTCATTTCAATCCAACCAATA
CATATGACATTGTGCAATGA
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Coding sequence (CDS) from alignment at ch4:2628143..2629262-

>KJC3_005405-T1 ID=KJC3_005405-T1|Name=KJC3_005405-T1|organism=Aspergillus niger KJC3|type=CDS|length=1773bp|location=Sequence derived from alignment at ch4:2628143..2629262- (Aspergillus niger KJC3)
AACTTCTCTGTTATGTCGGAATATATCACCTCGATGGGTCGGATAAAGCA
CAGAAACATGACGGGTCTGCGGCCCGTCAACCAGCGCAAGATTTCCAAGG
CTATCCGGAGAGCTGTTGGTCTCGGTCTCATGCCCAGTGTTCACCGACAC
CCGGAAGTTCTGGCGGCCGAAGCAAGGTCGCGGATGGAGGGAGGAAGTGG
CTACTGACTCCCAAAGTGTACAACCGCCGCCGTGGACCAGTGGACCGCCG
CCGATTTCTCGAGGAGCAGCGGGCTCAGAGTGAGAGCAGGGCTTTGGAGA
GGTTCCAGACGCGTGAATGGAAAGCCGGTGATCTCTATGCCCCTCATGAT
CTCAGCCCGGCAGAGATGAAGAAATGGAGGAAGCGTTACAGTCCCTCGAC
TGATGCCTTTGACGCCCTGAACCTGAACCCCCTGGATTTGTATAAGATGG
CTCTTCATCTCTTTTCGTGGTCGCCTTTGCGCACCGTTGGCTCAGCCTTT
GGGTCGGTGTCTGCTGCTGCTAGTGTTGCTTGTCGCTGGAATTCGACGGC
TGCTCCGAATCCCGCTCCTCAGCGTGGCCCCAGATCTCGGTAACTTCTCT
GTTATGTCGGAATATATCACCTCGATGGGTCGGATAAAGCACAGAAACAT
GACGGGTCTGCGGCCCGTCAACCAGCGCAAGATTTCCAAGGCTATCCGGA
GAGCTGTTGGTCTCGGTCTCATGCCCAGTGTTCACCGACACCCGGAAGTT
CTGGCGGCCGAAGCAAGGTCGCGGATGGAGGGAGGAAGTGGCTACTGACT
CCCAAAGTGTACAACCGCCGCCGTGGACCAGTGGACCGCCGCCGATTTCT
CGAGGAGCAGCGGGCTCAGAGTGAGAGCAGGGCTTTGGAGAGGTTCCAGA
CGCGTGAATGGAAAGCCGGTGATCTCTATGCCCCTCATGATCTCAGCCCG
GCAGAGATGAAGAAATGGAGGAAGCGTTACAGTCCCTCGACTGATGCCTT
TGACGCCCTGAACCTGAACCCCCTGGATTTGTATAAGATGGCTCTTCATC
TCTTTTCGTGGTCGCCTTTGCGCACCGTTGGCTCAGCCTTTGGGTCGGTG
TCTGCTGCTGCTAGTGTTGCTTGTCGCTGGAATTCGACGGCTGCTCCGAA
TCCCGCTCCTCAGCGTGGCCCCAGATCTCGGTAACTTCTCTGTTATGTCG
GAATATATCACCTCGATGGGTCGGATAAAGCACAGAAACATGACGGGTCT
GCGGCCCGTCAACCAGCGCAAGATTTCCAAGGCTATCCGGAGAGCTGTTG
GTCTCGGTCTCATGCCCAGTGTTCACCGACACCCGGAAGTTCTGGCGGCC
GAAGCAAGGTCGCGGATGGAGGGAGGAAGTGGCTACTGACTCCCAAAGTG
TACAACCGCCGCCGTGGACCAGTGGACCGCCGCCGATTTCTCGAGGAGCA
GCGGGCTCAGAGTGAGAGCAGGGCTTTGGAGAGGTTCCAGACGCGTGAAT
GGAAAGCCGGTGATCTCTATGCCCCTCATGATCTCAGCCCGGCAGAGATG
AAGAAATGGAGGAAGCGTTACAGTCCCTCGACTGATGCCTTTGACGCCCT
GAACCTGAACCCCCTGGATTTGTATAAGATGGCTCTTCATCTCTTTTCGT
GGTCGCCTTTGCGCACCGTTGGCTCAGCCTTTGGGTCGGTGTCTGCTGCT
GCTAGTGTTGCTTGTCGCTGGAATTCGACGGCTGCTCCGAATCCCGCTCC
TCAGCGTGGCCCCAGATCTCGGT
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005840ribosome
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
Vocabulary: Molecular Function
TermDefinition
GO:0003735structural constituent of ribosome
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_005405KJC3_005405Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005405-T1KJC3_005405-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005405-T1.cdsKJC3_005405-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005405-T1.utr3p1KJC3_005405-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005405-T1.exon3KJC3_005405-T1.exon3Aspergillus niger KJC3exon
KJC3_005405-T1.exon2KJC3_005405-T1.exon2Aspergillus niger KJC3exon
KJC3_005405-T1.exon1KJC3_005405-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005405-T1.utr5p1KJC3_005405-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
NoteBUSCO:EOG09264XLN
DBxrefInterPro:IPR001648
DBxrefInterPro:IPR036870
DBxrefPFAM:PF01084
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch4supercontigch4:2628143..2629262 -
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