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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:2638762..2642220- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_005408-T1 ID=KJC3_005408-T1|Name=KJC3_005408-T1|organism=Aspergillus niger KJC3|type=mRNA|length=3459bp|location=Sequence derived from alignment at ch4:2638762..2642220- (Aspergillus niger KJC3)
CCTCGACTATCGCCAATTCTTCCACCTTCCGTCCATCCTCTCGCTCATTT
CTTTCTCCTTGGGACTATCTCCTGGTGAGTGTATAGGTCCTAGGCGCGGT
CGTTGAGAGACCGCCCATCTGCCCACTATGAGGCCGTTTACCGCACTTGC
TGCGCTGTGCGGCTTGTTCCTGTCCAGCAACAGCTTGGTCTATGCCGACT
CGGCTCCCTCGAGCTCCCCTGTAGCTCTCCCTCGCGATTTCAAGCCTCCC
CAAGTGTTTAAGAACGCCAATCTTGTCCGCAACACCAATTTGGAGAAGGG
ATACCTACGTGAGACCGTCAATGTTGTCGTTGAGAATGTGGACAAGAAGC
CGCAGTCCGACTACTACTTGTCCTTCCCATCCGACCTTTACGACAAGGTC
GGTGCCCTAGAAGTCCGTGATAAATCGGCTCCTGAACAGGGACGCTTCGA
AGTGGAAGCTACTGAGTTCGACTCAAGCAGGTAAGTCGACCACAATGGCG
GCCAATGGCTGGTTGGTGGAGCACGAAGCCACGGTTGCTTGATCTATGCA
TGGTGGATGTATCCCGGGCGGTTTGCTGATCTCCTCTCTTTCTTTACACA
GGGACTTCCAGTACTTCGTTGTTCACCTCCCCAAGCCTCTCGCCCCTTCG
TCGCAGATCACTCTGGGCATCTCCTACTCCGCCCTCAACACCCTGAAGCC
CCGTCCTGCGGCCATCAGCCAGAATGATCGCCAGTACCTCGCCTATGCCT
TCTCTGCCTACGCTCCCTCGGCTTACACGACAACGACCCAGAAGACCAAG
ATCAAGTTCCCCAGCACCAATGTTCCCGACTACACCTCCACGGACCTGAC
GTCGGGCGCGGATCCAGAGCGCCAGGGTGCCACCTACACCTACGGACCCT
ACGCCGACGTCGCTCCCGAGACCACCTACCCGGCCAGTGTCCGGTACGAG
TTCACCAAGCCCGTCATCACTGCCACTCTTCTGGAGCGTGACCTGGAAGT
GTCCCACTGGGGCGGCAACCTGGCGACGGAAGAGCGCTACTGGCTGCGCA
ACAACGGCTCCAAGCTCACCGACAACTTCAACCGCGTGGAATGGACCATC
AGCAGCTACCAGCAGCTGCCGTCCTCCGCTATCCGCGAGCTGAAGATCCC
CCTCAAGCCCGGCTCCGTGGACCCCTACTTCACCGACGACATTGGCAACG
TTTCCACGAGCCGCTACCGTCCCGGAAAGGTCCCGAACCGTGACGCCTCC
CTGGAGCTTCGTCCCCGGTTCCCCATCTTCGGCGGATGGAACTACAGCTT
CCGCATTGGCTGGAACAACGACCTCTCTGCCTTCCTTCGCAAGGCTGTCA
CCGGCGCTGATTCCTACGTCCTCAAGGTCCCCTTCATCGAGGGCCCCAAG
GTTTCCGAGGGTATTCAGTATGAGAAGGCCGTCGTGCGCATCATCCTCCC
CGAGGGTGCCCGGAACGTCCGCTACGAGCTCCTCGAGAAGGCGACTAGCA
ATGGTCTCCCCGGTGCGAACCAGATCCAGACTGAGCTCACCAGCCACAAG
ACTTTCATGGATACCCTAGGACGCACGGCGCTGACTTTGACCGTGGAGGA
GTTGACTGATGAGGCCCGTGACTCGCAGATAGTGGTAAGTAACTACCTCC
ATACGCCGGATAGATATCGGGAATAGTCCAGCTCATTTTTGGATATAGGT
CACTTACGACTACTCTCTGTGGGATGGATTGCGCAAGCCCGTGACCATCA
CGGCGGGGCTGTTCACCGTGTTTGTTGCCGCGTGGGCGATTGGAAATATT
GACGTGAGTATTAAGAAGCGGTAGATGGAGGTTGTATCATATTGTTTCAG
TTATACCAGCCAGACAGACAGACAGAATTCAATAGTAGCTGTTTGTAGAC
GACTAGAATTCTGATAGTGTGATTTCGAATGATTCCCTCCTTGAATAATA
TGGAGACAGTCTGATGCAGAGTGGTCTTTGCACCAGGTAGTAAGTGGGCT
ATCGGTTGTCAGCGTCACCTGACATACTAGGGATCTCTAGCCTGAAAGTT
TGGCAATCCAAAGGGGATTAGTCTCTGTTGTATGTTAATCCAACGTTCTA
TATCTGGGTCTGCTAAGGATGGCCAAATCAGTGGGACCCGACGGTGCATG
GATTGGACACTCATGTGTTTGTTTCTGGGTACCTTGCATTATAGAGGAGC
CTGGAAGCGGCTTACAGAAATTTGAACAGCAAAGAAGACGAAGTGCAAAG
TTGGTTGTGACGGATACCCACCATCAGCTTTCAGGATTCTCTACAACTCC
ATTTCAGTCCACTGCACCAGTTGCCTGTTCGATTGGCTATACCCATCGTA
GAGCAGAATTTCACCGTATCAACTTCGGATACTTTCGAGACGACTATCAT
AGCAGGTGTAGACTAGTTCACCAAGCAGGGCGCTGAGCGCATTATGGATA
GGTTCACCCGATGCAATATAGATAGCTGAACTGTATCCGGTCCAGTAGGA
TCTTATCGGAGCGCCTGATAATTGCTAGCTAAGACGACCATCAATTTCTG
AAGCCGGCTGTTGCAGCTTACACCATGCAGGTGTGAGAGCAAACCAAGCA
AAAGCTGATCAACGTGGTTTGCATGCAGATGCTGCAGAGTGTAATTGATA
GATGTCTGCAGCTCATCAGCCATTATACTGCTCCCGAATCGTCTCCAGTG
CACGAGGGCAATGGCAGCTTGTCCGCAGCCATTGACTGCATTCAACCTTT
TGTCGAAACTCTGAAATGCAGGTGACAGAGTTGGCCTTGGTATGTGACCT
GTCGGGATCGGACTTGCTGATGATATGTCGCCGGGATAAAATTCCTCCCA
GCAGCAGCCGTGTCTTCATGCAAAGCTGTCCGAGAGCCTATTCAGCTGAG
CATCTTTTGATACAAGTCTAACGGCCGAGCACCTATCGGCGACAAGTAGC
AGAGCTCGAGCAATCAAGCTGCAAAGACGGTGAAAACACTCGGGAGTCAC
AAGATGCGGGATGCGCGACACCGCTTGTGCGTGCCTCTTCCCGTTGGATG
TTGGCATGTCTAGATTAGTCTTGCGGTGCATGGCATGGCAGCAAAGGGCC
GGTTGTACGTCATTGCATCAAGGAATCACGGCAACCGAACGAAGCAGCCG
ACAGCGAATGGGAGCCGCCGGGGATGGCGCATGGTCCGGAAGTATTCTTT
TGTCTTCCAGTGCTGGAGTTCTCATTACTTCATATGGACCATTCGAGACG
AGGAGTAAGTGGAGCCTCCGGTGGGTTAAAGCAAAACCACTCATGTTTGG
AAGTCTGAACCCCATCCGTTCCACCGCCAAGAGGGGGCGAAAGAGAGAAG
AAACAGTGTGAGAGAGAGAGAGGAATATCCACCCCCGCCTCTGGAAGAGG
AGGGGAATGCTGGGAGTTTGGAACTTTGGGGAAAAGAGACATGGGGGAGG
ATACGCGGA back to topCoding sequence (CDS) from alignment at ch4:2638762..2642220- >KJC3_005408-T1 ID=KJC3_005408-T1|Name=KJC3_005408-T1|organism=Aspergillus niger KJC3|type=CDS|length=2856bp|location=Sequence derived from alignment at ch4:2638762..2642220- (Aspergillus niger KJC3)
GGACTTCCAGTACTTCGTTGTTCACCTCCCCAAGCCTCTCGCCCCTTCGT
CGCAGATCACTCTGGGCATCTCCTACTCCGCCCTCAACACCCTGAAGCCC
CGTCCTGCGGCCATCAGCCAGAATGATCGCCAGTACCTCGCCTATGCCTT
CTCTGCCTACGCTCCCTCGGCTTACACGACAACGACCCAGAAGACCAAGA
TCAAGTTCCCCAGCACCAATGTTCCCGACTACACCTCCACGGACCTGACG
TCGGGCGCGGATCCAGAGCGCCAGGGTGCCACCTACACCTACGGACCCTA
CGCCGACGTCGCTCCCGAGACCACCTACCCGGCCAGTGTCCGGTACGAGT
TCACCAAGCCCGTCATCACTGCCACTCTTCTGGAGCGTGACCTGGAAGTG
TCCCACTGGGGCGGCAACCTGGCGACGGAAGAGCGCTACTGGCTGCGCAA
CAACGGCTCCAAGCTCACCGACAACTTCAACCGCGTGGAATGGACCATCA
GCAGCTACCAGCAGCTGCCGTCCTCCGCTATCCGCGAGCTGAAGATCCCC
CTCAAGCCCGGCTCCGTGGACCCCTACTTCACCGACGACATTGGCAACGT
TTCCACGAGCCGCTACCGTCCCGGAAAGGTCCCGAACCGTGACGCCTCCC
TGGAGCTTCGTCCCCGGTTCCCCATCTTCGGCGGATGGAACTACAGCTTC
CGCATTGGCTGGAACAACGACCTCTCTGCCTTCCTTCGCAAGGCTGTCAC
CGGCGCTGATTCCTACGTCCTCAAGGTCCCCTTCATCGAGGGCCCCAAGG
TTTCCGAGGGTATTCAGTATGAGAAGGCCGTCGTGCGCATCATCCTCCCC
GAGGGTGCCCGGAACGTCCGCTACGAGCTCCTCGAGAAGGCGACTAGCAA
TGGTCTCCCCGGTGCGAACCAGATCCAGACTGAGCTCACCAGCCACAAGA
CTTTCATGGATACCCTAGGACGCACGGCGCTGACTTTGACCGTGGAGGAG
TTGACTGATGAGGCCCGTGACTCGCAGATAGTGGTAAGTAACTACCTCCA
TACGCCGGATAGATATCGGGAATAGATGAGGCCGTTTACCGCACTTGCTG
CGCTGTGCGGCTTGTTCCTGTCCAGCAACAGCTTGGTCTATGCCGACTCG
GCTCCCTCGAGCTCCCCTGTAGCTCTCCCTCGCGATTTCAAGCCTCCCCA
AGTGTTTAAGAACGCCAATCTTGTCCGCAACACCAATTTGGAGAAGGGAT
ACCTACGTGAGACCGTCAATGTTGTCGTTGAGAATGTGGACAAGAAGCCG
CAGTCCGACTACTACTTGTCCTTCCCATCCGACCTTTACGACAAGGTCGG
TGCCCTAGAAGTCCGTGATAAATCGGCTCCTGAACAGGGACGCTTCGAAG
TGGAAGCTACTGAGTTCGACTCAAGCAGGGACTTCCAGTACTTCGTTGTT
CACCTCCCCAAGCCTCTCGCCCCTTCGTCGCAGATCACTCTGGGCATCTC
CTACTCCGCCCTCAACACCCTGAAGCCCCGTCCTGCGGCCATCAGCCAGA
ATGATCGCCAGTACCTCGCCTATGCCTTCTCTGCCTACGCTCCCTCGGCT
TACACGACAACGACCCAGAAGACCAAGATCAAGTTCCCCAGCACCAATGT
TCCCGACTACACCTCCACGGACCTGACGTCGGGCGCGGATCCAGAGCGCC
AGGGTGCCACCTACACCTACGGACCCTACGCCGACGTCGCTCCCGAGACC
ACCTACCCGGCCAGTGTCCGGTACGAGTTCACCAAGCCCGTCATCACTGC
CACTCTTCTGGAGCGTGACCTGGAAGTGTCCCACTGGGGCGGCAACCTGG
CGACGGAAGAGCGCTACTGGCTGCGCAACAACGGCTCCAAGCTCACCGAC
AACTTCAACCGCGTGGAATGGACCATCAGCAGCTACCAGCAGCTGCCGTC
CTCCGCTATCCGCGAGCTGAAGATCCCCCTCAAGCCCGGCTCCGTGGACC
CCTACTTCACCGACGACATTGGCAACGTTTCCACGAGCCGCTACCGTCCC
GGAAAGGTCCCGAACCGTGACGCCTCCCTGGAGCTTCGTCCCCGGTTCCC
CATCTTCGGCGGATGGAACTACAGCTTCCGCATTGGCTGGAACAACGACC
TCTCTGCCTTCCTTCGCAAGGCTGTCACCGGCGCTGATTCCTACGTCCTC
AAGGTCCCCTTCATCGAGGGCCCCAAGGTTTCCGAGGGTATTCAGTATGA
GAAGGCCGTCGTGCGCATCATCCTCCCCGAGGGTGCCCGGAACGTCCGCT
ACGAGCTCCTCGAGAAGGCGACTAGCAATGGTCTCCCCGGTGCGAACCAG
ATCCAGACTGAGCTCACCAGCCACAAGACTTTCATGGATACCCTAGGACG
CACGGCGCTGACTTTGACCGTGGAGGAGTTGACTGATGAGGCCCGTGACT
CGCAGATAGTGGTAAGTAACTACCTCCATACGCCGGATAGATATCGGGAA
TAGATGAGGCCGTTTACCGCACTTGCTGCGCTGTGCGGCTTGTTCCTGTC
CAGCAACAGCTTGGTCTATGCCGACTCGGCTCCCTCGAGCTCCCCTGTAG
CTCTCCCTCGCGATTTCAAGCCTCCCCAAGTGTTTAAGAACGCCAATCTT
GTCCGCAACACCAATTTGGAGAAGGGATACCTACGTGAGACCGTCAATGT
TGTCGTTGAGAATGTGGACAAGAAGCCGCAGTCCGACTACTACTTGTCCT
TCCCATCCGACCTTTACGACAAGGTCGGTGCCCTAGAAGTCCGTGATAAA
TCGGCTCCTGAACAGGGACGCTTCGAAGTGGAAGCTACTGAGTTCGACTC
AAGCAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005783 | endoplasmic reticulum |
| GO:0016021 | integral component of membrane |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006486 | protein glycosylation |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_005408-T1.utr3p1 | KJC3_005408-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_005408-T1.utr5p1 | KJC3_005408-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| Note | SECRETED:SignalP(1-23) |
| Note | BUSCO:EOG092628A0 |
| DBxref | InterPro:IPR007676 |
| DBxref | PFAM:PF04597 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch4 | supercontig | ch4:2638762..2642220 - |
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