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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:2638762..2642220- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_005408-T2 ID=KJC3_005408-T2|Name=KJC3_005408-T2|organism=Aspergillus niger KJC3|type=mRNA|length=3459bp|location=Sequence derived from alignment at ch4:2638762..2642220- (Aspergillus niger KJC3)
CCTCGACTATCGCCAATTCTTCCACCTTCCGTCCATCCTCTCGCTCATTT
CTTTCTCCTTGGGACTATCTCCTGGTGAGTGTATAGGTCCTAGGCGCGGT
CGTTGAGAGACCGCCCATCTGCCCACTATGAGGCCGTTTACCGCACTTGC
TGCGCTGTGCGGCTTGTTCCTGTCCAGCAACAGCTTGGTCTATGCCGACT
CGGCTCCCTCGAGCTCCCCTGTAGCTCTCCCTCGCGATTTCAAGCCTCCC
CAAGTGTTTAAGAACGCCAATCTTGTCCGCAACACCAATTTGGAGAAGGG
ATACCTACGTGAGACCGTCAATGTTGTCGTTGAGAATGTGGACAAGAAGC
CGCAGTCCGACTACTACTTGTCCTTCCCATCCGACCTTTACGACAAGGTC
GGTGCCCTAGAAGTCCGTGATAAATCGGCTCCTGAACAGGGACGCTTCGA
AGTGGAAGCTACTGAGTTCGACTCAAGCAGGTAAGTCGACCACAATGGCG
GCCAATGGCTGGTTGGTGGAGCACGAAGCCACGGTTGCTTGATCTATGCA
TGGTGGATGTATCCCGGGCGGTTTGCTGATCTCCTCTCTTTCTTTACACA
GGGACTTCCAGTACTTCGTTGTTCACCTCCCCAAGCCTCTCGCCCCTTCG
TCGCAGATCACTCTGGGCATCTCCTACTCCGCCCTCAACACCCTGAAGCC
CCGTCCTGCGGCCATCAGCCAGAATGATCGCCAGTACCTCGCCTATGCCT
TCTCTGCCTACGCTCCCTCGGCTTACACGACAACGACCCAGAAGACCAAG
ATCAAGTTCCCCAGCACCAATGTTCCCGACTACACCTCCACGGACCTGAC
GTCGGGCGCGGATCCAGAGCGCCAGGGTGCCACCTACACCTACGGACCCT
ACGCCGACGTCGCTCCCGAGACCACCTACCCGGCCAGTGTCCGGTACGAG
TTCACCAAGCCCGTCATCACTGCCACTCTTCTGGAGCGTGACCTGGAAGT
GTCCCACTGGGGCGGCAACCTGGCGACGGAAGAGCGCTACTGGCTGCGCA
ACAACGGCTCCAAGCTCACCGACAACTTCAACCGCGTGGAATGGACCATC
AGCAGCTACCAGCAGCTGCCGTCCTCCGCTATCCGCGAGCTGAAGATCCC
CCTCAAGCCCGGCTCCGTGGACCCCTACTTCACCGACGACATTGGCAACG
TTTCCACGAGCCGCTACCGTCCCGGAAAGGTCCCGAACCGTGACGCCTCC
CTGGAGCTTCGTCCCCGGTTCCCCATCTTCGGCGGATGGAACTACAGCTT
CCGCATTGGCTGGAACAACGACCTCTCTGCCTTCCTTCGCAAGGCTGTCA
CCGGCGCTGATTCCTACGTCCTCAAGGTCCCCTTCATCGAGGGCCCCAAG
GTTTCCGAGGGTATTCAGTATGAGAAGGCCGTCGTGCGCATCATCCTCCC
CGAGGGTGCCCGGAACGTCCGCTACGAGCTCCTCGAGAAGGCGACTAGCA
ATGGTCTCCCCGGTGCGAACCAGATCCAGACTGAGCTCACCAGCCACAAG
ACTTTCATGGATACCCTAGGACGCACGGCGCTGACTTTGACCGTGGAGGA
GTTGACTGATGAGGCCCGTGACTCGCAGATAGTGGTAAGTAACTACCTCC
ATACGCCGGATAGATATCGGGAATAGTCCAGCTCATTTTTGGATATAGGT
CACTTACGACTACTCTCTGTGGGATGGATTGCGCAAGCCCGTGACCATCA
CGGCGGGGCTGTTCACCGTGTTTGTTGCCGCGTGGGCGATTGGAAATATT
GACGTGAGTATTAAGAAGCGGTAGATGGAGGTTGTATCATATTGTTTCAG
TTATACCAGCCAGACAGACAGACAGAATTCAATAGTAGCTGTTTGTAGAC
GACTAGAATTCTGATAGTGTGATTTCGAATGATTCCCTCCTTGAATAATA
TGGAGACAGTCTGATGCAGAGTGGTCTTTGCACCAGGTAGTAAGTGGGCT
ATCGGTTGTCAGCGTCACCTGACATACTAGGGATCTCTAGCCTGAAAGTT
TGGCAATCCAAAGGGGATTAGTCTCTGTTGTATGTTAATCCAACGTTCTA
TATCTGGGTCTGCTAAGGATGGCCAAATCAGTGGGACCCGACGGTGCATG
GATTGGACACTCATGTGTTTGTTTCTGGGTACCTTGCATTATAGAGGAGC
CTGGAAGCGGCTTACAGAAATTTGAACAGCAAAGAAGACGAAGTGCAAAG
TTGGTTGTGACGGATACCCACCATCAGCTTTCAGGATTCTCTACAACTCC
ATTTCAGTCCACTGCACCAGTTGCCTGTTCGATTGGCTATACCCATCGTA
GAGCAGAATTTCACCGTATCAACTTCGGATACTTTCGAGACGACTATCAT
AGCAGGTGTAGACTAGTTCACCAAGCAGGGCGCTGAGCGCATTATGGATA
GGTTCACCCGATGCAATATAGATAGCTGAACTGTATCCGGTCCAGTAGGA
TCTTATCGGAGCGCCTGATAATTGCTAGCTAAGACGACCATCAATTTCTG
AAGCCGGCTGTTGCAGCTTACACCATGCAGGTGTGAGAGCAAACCAAGCA
AAAGCTGATCAACGTGGTTTGCATGCAGATGCTGCAGAGTGTAATTGATA
GATGTCTGCAGCTCATCAGCCATTATACTGCTCCCGAATCGTCTCCAGTG
CACGAGGGCAATGGCAGCTTGTCCGCAGCCATTGACTGCATTCAACCTTT
TGTCGAAACTCTGAAATGCAGGTGACAGAGTTGGCCTTGGTATGTGACCT
GTCGGGATCGGACTTGCTGATGATATGTCGCCGGGATAAAATTCCTCCCA
GCAGCAGCCGTGTCTTCATGCAAAGCTGTCCGAGAGCCTATTCAGCTGAG
CATCTTTTGATACAAGTCTAACGGCCGAGCACCTATCGGCGACAAGTAGC
AGAGCTCGAGCAATCAAGCTGCAAAGACGGTGAAAACACTCGGGAGTCAC
AAGATGCGGGATGCGCGACACCGCTTGTGCGTGCCTCTTCCCGTTGGATG
TTGGCATGTCTAGATTAGTCTTGCGGTGCATGGCATGGCAGCAAAGGGCC
GGTTGTACGTCATTGCATCAAGGAATCACGGCAACCGAACGAAGCAGCCG
ACAGCGAATGGGAGCCGCCGGGGATGGCGCATGGTCCGGAAGTATTCTTT
TGTCTTCCAGTGCTGGAGTTCTCATTACTTCATATGGACCATTCGAGACG
AGGAGTAAGTGGAGCCTCCGGTGGGTTAAAGCAAAACCACTCATGTTTGG
AAGTCTGAACCCCATCCGTTCCACCGCCAAGAGGGGGCGAAAGAGAGAAG
AAACAGTGTGAGAGAGAGAGAGGAATATCCACCCCCGCCTCTGGAAGAGG
AGGGGAATGCTGGGAGTTTGGAACTTTGGGGAAAAGAGACATGGGGGAGG
ATACGCGGA back to topCoding sequence (CDS) from alignment at ch4:2638762..2642220- >KJC3_005408-T2 ID=KJC3_005408-T2|Name=KJC3_005408-T2|organism=Aspergillus niger KJC3|type=CDS|length=4536bp|location=Sequence derived from alignment at ch4:2638762..2642220- (Aspergillus niger KJC3)
GTCACTTACGACTACTCTCTGTGGGATGGATTGCGCAAGCCCGTGACCAT
CACGGCGGGGCTGTTCACCGTGTTTGTTGCCGCGTGGGCGATTGGAAATA
TTGACGTGAGTATTAAGAAGCGGTAGGGACTTCCAGTACTTCGTTGTTCA
CCTCCCCAAGCCTCTCGCCCCTTCGTCGCAGATCACTCTGGGCATCTCCT
ACTCCGCCCTCAACACCCTGAAGCCCCGTCCTGCGGCCATCAGCCAGAAT
GATCGCCAGTACCTCGCCTATGCCTTCTCTGCCTACGCTCCCTCGGCTTA
CACGACAACGACCCAGAAGACCAAGATCAAGTTCCCCAGCACCAATGTTC
CCGACTACACCTCCACGGACCTGACGTCGGGCGCGGATCCAGAGCGCCAG
GGTGCCACCTACACCTACGGACCCTACGCCGACGTCGCTCCCGAGACCAC
CTACCCGGCCAGTGTCCGGTACGAGTTCACCAAGCCCGTCATCACTGCCA
CTCTTCTGGAGCGTGACCTGGAAGTGTCCCACTGGGGCGGCAACCTGGCG
ACGGAAGAGCGCTACTGGCTGCGCAACAACGGCTCCAAGCTCACCGACAA
CTTCAACCGCGTGGAATGGACCATCAGCAGCTACCAGCAGCTGCCGTCCT
CCGCTATCCGCGAGCTGAAGATCCCCCTCAAGCCCGGCTCCGTGGACCCC
TACTTCACCGACGACATTGGCAACGTTTCCACGAGCCGCTACCGTCCCGG
AAAGGTCCCGAACCGTGACGCCTCCCTGGAGCTTCGTCCCCGGTTCCCCA
TCTTCGGCGGATGGAACTACAGCTTCCGCATTGGCTGGAACAACGACCTC
TCTGCCTTCCTTCGCAAGGCTGTCACCGGCGCTGATTCCTACGTCCTCAA
GGTCCCCTTCATCGAGGGCCCCAAGGTTTCCGAGGGTATTCAGTATGAGA
AGGCCGTCGTGCGCATCATCCTCCCCGAGGGTGCCCGGAACGTCCGCTAC
GAGCTCCTCGAGAAGGCGACTAGCAATGGTCTCCCCGGTGCGAACCAGAT
CCAGACTGAGCTCACCAGCCACAAGACTTTCATGGATACCCTAGGACGCA
CGGCGCTGACTTTGACCGTGGAGGAGTTGACTGATGAGGCCCGTGACTCG
CAGATAGTGATGAGGCCGTTTACCGCACTTGCTGCGCTGTGCGGCTTGTT
CCTGTCCAGCAACAGCTTGGTCTATGCCGACTCGGCTCCCTCGAGCTCCC
CTGTAGCTCTCCCTCGCGATTTCAAGCCTCCCCAAGTGTTTAAGAACGCC
AATCTTGTCCGCAACACCAATTTGGAGAAGGGATACCTACGTGAGACCGT
CAATGTTGTCGTTGAGAATGTGGACAAGAAGCCGCAGTCCGACTACTACT
TGTCCTTCCCATCCGACCTTTACGACAAGGTCGGTGCCCTAGAAGTCCGT
GATAAATCGGCTCCTGAACAGGGACGCTTCGAAGTGGAAGCTACTGAGTT
CGACTCAAGCAGGTCACTTACGACTACTCTCTGTGGGATGGATTGCGCAA
GCCCGTGACCATCACGGCGGGGCTGTTCACCGTGTTTGTTGCCGCGTGGG
CGATTGGAAATATTGACGTGAGTATTAAGAAGCGGTAGGGACTTCCAGTA
CTTCGTTGTTCACCTCCCCAAGCCTCTCGCCCCTTCGTCGCAGATCACTC
TGGGCATCTCCTACTCCGCCCTCAACACCCTGAAGCCCCGTCCTGCGGCC
ATCAGCCAGAATGATCGCCAGTACCTCGCCTATGCCTTCTCTGCCTACGC
TCCCTCGGCTTACACGACAACGACCCAGAAGACCAAGATCAAGTTCCCCA
GCACCAATGTTCCCGACTACACCTCCACGGACCTGACGTCGGGCGCGGAT
CCAGAGCGCCAGGGTGCCACCTACACCTACGGACCCTACGCCGACGTCGC
TCCCGAGACCACCTACCCGGCCAGTGTCCGGTACGAGTTCACCAAGCCCG
TCATCACTGCCACTCTTCTGGAGCGTGACCTGGAAGTGTCCCACTGGGGC
GGCAACCTGGCGACGGAAGAGCGCTACTGGCTGCGCAACAACGGCTCCAA
GCTCACCGACAACTTCAACCGCGTGGAATGGACCATCAGCAGCTACCAGC
AGCTGCCGTCCTCCGCTATCCGCGAGCTGAAGATCCCCCTCAAGCCCGGC
TCCGTGGACCCCTACTTCACCGACGACATTGGCAACGTTTCCACGAGCCG
CTACCGTCCCGGAAAGGTCCCGAACCGTGACGCCTCCCTGGAGCTTCGTC
CCCGGTTCCCCATCTTCGGCGGATGGAACTACAGCTTCCGCATTGGCTGG
AACAACGACCTCTCTGCCTTCCTTCGCAAGGCTGTCACCGGCGCTGATTC
CTACGTCCTCAAGGTCCCCTTCATCGAGGGCCCCAAGGTTTCCGAGGGTA
TTCAGTATGAGAAGGCCGTCGTGCGCATCATCCTCCCCGAGGGTGCCCGG
AACGTCCGCTACGAGCTCCTCGAGAAGGCGACTAGCAATGGTCTCCCCGG
TGCGAACCAGATCCAGACTGAGCTCACCAGCCACAAGACTTTCATGGATA
CCCTAGGACGCACGGCGCTGACTTTGACCGTGGAGGAGTTGACTGATGAG
GCCCGTGACTCGCAGATAGTGATGAGGCCGTTTACCGCACTTGCTGCGCT
GTGCGGCTTGTTCCTGTCCAGCAACAGCTTGGTCTATGCCGACTCGGCTC
CCTCGAGCTCCCCTGTAGCTCTCCCTCGCGATTTCAAGCCTCCCCAAGTG
TTTAAGAACGCCAATCTTGTCCGCAACACCAATTTGGAGAAGGGATACCT
ACGTGAGACCGTCAATGTTGTCGTTGAGAATGTGGACAAGAAGCCGCAGT
CCGACTACTACTTGTCCTTCCCATCCGACCTTTACGACAAGGTCGGTGCC
CTAGAAGTCCGTGATAAATCGGCTCCTGAACAGGGACGCTTCGAAGTGGA
AGCTACTGAGTTCGACTCAAGCAGGTCACTTACGACTACTCTCTGTGGGA
TGGATTGCGCAAGCCCGTGACCATCACGGCGGGGCTGTTCACCGTGTTTG
TTGCCGCGTGGGCGATTGGAAATATTGACGTGAGTATTAAGAAGCGGTAG
GGACTTCCAGTACTTCGTTGTTCACCTCCCCAAGCCTCTCGCCCCTTCGT
CGCAGATCACTCTGGGCATCTCCTACTCCGCCCTCAACACCCTGAAGCCC
CGTCCTGCGGCCATCAGCCAGAATGATCGCCAGTACCTCGCCTATGCCTT
CTCTGCCTACGCTCCCTCGGCTTACACGACAACGACCCAGAAGACCAAGA
TCAAGTTCCCCAGCACCAATGTTCCCGACTACACCTCCACGGACCTGACG
TCGGGCGCGGATCCAGAGCGCCAGGGTGCCACCTACACCTACGGACCCTA
CGCCGACGTCGCTCCCGAGACCACCTACCCGGCCAGTGTCCGGTACGAGT
TCACCAAGCCCGTCATCACTGCCACTCTTCTGGAGCGTGACCTGGAAGTG
TCCCACTGGGGCGGCAACCTGGCGACGGAAGAGCGCTACTGGCTGCGCAA
CAACGGCTCCAAGCTCACCGACAACTTCAACCGCGTGGAATGGACCATCA
GCAGCTACCAGCAGCTGCCGTCCTCCGCTATCCGCGAGCTGAAGATCCCC
CTCAAGCCCGGCTCCGTGGACCCCTACTTCACCGACGACATTGGCAACGT
TTCCACGAGCCGCTACCGTCCCGGAAAGGTCCCGAACCGTGACGCCTCCC
TGGAGCTTCGTCCCCGGTTCCCCATCTTCGGCGGATGGAACTACAGCTTC
CGCATTGGCTGGAACAACGACCTCTCTGCCTTCCTTCGCAAGGCTGTCAC
CGGCGCTGATTCCTACGTCCTCAAGGTCCCCTTCATCGAGGGCCCCAAGG
TTTCCGAGGGTATTCAGTATGAGAAGGCCGTCGTGCGCATCATCCTCCCC
GAGGGTGCCCGGAACGTCCGCTACGAGCTCCTCGAGAAGGCGACTAGCAA
TGGTCTCCCCGGTGCGAACCAGATCCAGACTGAGCTCACCAGCCACAAGA
CTTTCATGGATACCCTAGGACGCACGGCGCTGACTTTGACCGTGGAGGAG
TTGACTGATGAGGCCCGTGACTCGCAGATAGTGATGAGGCCGTTTACCGC
ACTTGCTGCGCTGTGCGGCTTGTTCCTGTCCAGCAACAGCTTGGTCTATG
CCGACTCGGCTCCCTCGAGCTCCCCTGTAGCTCTCCCTCGCGATTTCAAG
CCTCCCCAAGTGTTTAAGAACGCCAATCTTGTCCGCAACACCAATTTGGA
GAAGGGATACCTACGTGAGACCGTCAATGTTGTCGTTGAGAATGTGGACA
AGAAGCCGCAGTCCGACTACTACTTGTCCTTCCCATCCGACCTTTACGAC
AAGGTCGGTGCCCTAGAAGTCCGTGATAAATCGGCTCCTGAACAGGGACG
CTTCGAAGTGGAAGCTACTGAGTTCGACTCAAGCAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005783 | endoplasmic reticulum |
| GO:0016021 | integral component of membrane |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006486 | protein glycosylation |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_005408-T2.utr3p1 | KJC3_005408-T2.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_005408-T2.utr5p1 | KJC3_005408-T2.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| Note | SECRETED:SignalP(1-23) |
| Note | BUSCO:EOG092628A0 |
| DBxref | InterPro:IPR007676 |
| DBxref | PFAM:PF04597 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch4 | supercontig | ch4:2638762..2642220 - |
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