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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:2675935..2679064- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_005421-T1 ID=KJC3_005421-T1|Name=KJC3_005421-T1|organism=Aspergillus niger KJC3|type=mRNA|length=3130bp|location=Sequence derived from alignment at ch4:2675935..2679064- (Aspergillus niger KJC3)
TTGCCATGTCAATTCTATAGTCAATGGTAAGAAAATGTCGTGAATATCAA
GCAGCTCTCCAGCCTGTTGCTCTCTTCCTCACACTTCATCTTCGTGGCCA
TCATTCTGAGGCACCTGCAGCAGCACCTCAGGCAGCTCCCCGGCTGCTCA
CCGCCTGCGGGCCGAGTGCCAGATGGCCTTCCTTTTCCCTTCATTATTTA
TTATATCCCTCTATCTCACTGATTGATCAAACTGGGTATATATCGCCGGC
CCATCTCGCCCTTGTCTGATCTTCTCAGACAATGTCCAATTCCTCGGCCG
GCGTGGCCAATGGCCATGCGGTGCCTCCCTCGCATCCCGCCCCCGACATC
TTCAATGCCAGCTCCGTTGCCGAGATCAAGGCCACCTTGTCGCACCTGCA
CCACCAGGAGGCCTCCGTTACAGCTCGTCTGGACGCCCTTGTGGCCTCCC
AGAAGGATTTCTCTCGCGAATTGGGAAGACTCGACTTACTCCGCGCCCAT
CTCGGCTCCCAGACCAGCACCACCCGCGCCATCAGCCATGGCATGCTGGC
CGATGCCGCAACCACCGCCGATCGCATATCCAGCGCCGTCCGCCGCCTCG
ATCTAGAACAATCCCGCGTCAAGGCAACCCTGGAAGTGGTGGAACAGGTT
TCGGAACTCAAAGCCTGTGTGCTGGGCGTCGCAGGCTCCATGGGTGCGCC
GCAGGACTGGGAGACTGCTGCCAGCTATCTGAACCGAGCCTCCAAGATCC
CCCCGGAGGTCGCGCAGGGGGCCTTTGCCGCGGAAATGGTGCCGACGGCC
GAGGTGCCCGATCCACCGAATGTTACGCTTGATAACGCTGCTGAATCGCT
CTGTGGCTTGTTCCTGCGCGAATTCGACAAGGCTGTTAAAGAGAACAACG
GTGCCCGCATCACCCGCTTCTTCAAGCTCTTCCCCCTCATCGGTCGCTCC
GAGGTGGGTCTGGATGTCTACGGCCGCTATGTCTGTCAAGGCGTGGCGGC
GCGAGCTCGATCCAACCTCAATGCCGGCACAGGGGCTTCGCCAAGCAAGG
ACGGCTTCTTCTACGCCAATGCGCTGACCAAGCTGTTCGAACATATCGCC
CAGATCATCGATGGTCACGGCGGCCTGGTGGAGCGTCACTACGGCCCGCG
CAAGATGAATCGCGTTATTGAGCGTCTGCAGCTGGAGGCCGATGTTCAAG
GTGGCATCATCCTGGACACTTGGAGCGACGAGCGGCATGTCGACCGAAAG
CTGACCGACACCAAGTCCTACGCTTTCACTTTCCTCGTGCAGAGCTTCCT
CCCTCCGCAGCGCAGCGGAACGCCCCGGTCCAACTCGCCTGCCGTACGGG
ATGCCGCTGCGGCCGATGATGAGGGCGTGGATATGAAGGAGATTGACGGG
CTTCTCAACGAGATGGCCGTCATGCTTGGTCGCTGGTCCCTGTACTGCCG
GTTCTTGGCCGACACCTGCAATGTAAGTTCTTACCAACACCATTCTGATC
GTCCTGACTGACCCAGTCCCAGCCCCCGGAAGAGGGTGACAACCAGAAAT
TCGCCCTGCCGCAGTTCCTCCGGGAATCCACTCTAGCGAAGAAAATCAAT
GACCGCCTGGCCTCTCCGTTCAACACCATGACCACATTCTTCTTCCGCCG
GTCGGTCGAGAAGGCGTTCCAGCTGGACGAACAGCCCTCTGGCCTGACCC
TGAACCCGCAGAGACCGCTCAAATCCGAGCCGCCGCACATCACATCCGCC
GTCGACGACATCATGTACATCGTCAACAAGGTCCTGCAGCAGTCTCTCGT
CACATCGCAAATCTCCGTCGTCACCAGCGTTGTGCCCACGCTCTCGCGCG
TCCTCGGCTCCGACTTCATCGGCATGACGCAGCGCAAGATGCGTGACGAA
TGCTACCCCCGCGCCGCCGTCCAGGGCGGCCAACCCCCCGAGCAACTCGT
CATCTCCTTCCTCGTCCTCATCAACAACCTTGACGTCGCCGTCGATTACG
TCCGCCGCATCCTACAGAACCATACCGAGCCCAAAAAGTCCATCGGCCCT
GATGGCCAGCCCGAGGAAACCGACCCTCTGCGCTCGCTCTTCCCCGTCCC
CGAGGAAGCCCGCCTCGCCACACAAACCCTCCAATCCCTCTCCGCCTCCT
TCGAGTCCAAGGTCACCGACCTCCTGGCAGACGGCATCCAAGTCGTCTTC
AATAACGTCATTAAACACCGTCTCCGCCCCATCCTCTCCGACGCCTTCCG
CGACATCGAGTATCAACCCCGCGAAGACACCGACCCTACCCGCACCATCT
ACCACGACTACGACTCCGACGATCCGGACTACATGGCGGATGGCACCGTC
CCAGATGACGACGACCCTACCAGCCGCGCAGAACTCGTCCGTCCGCGCTT
CGCCGCCGCCTGGACCGAGCTGCTCCTGCCCCTCAGCCGCATCCTCACCG
CATCCGCCTTTGACCGTCTCCTCACCGTCACCATCGCCTACCTCTCTCGA
CTCCTGGAGAAGCGTCTCTGGTCTTACCACGGCCGTGTCAATGCCCTGGG
CGCCACCCGCCTCGAACGCGATGTATCCGGGGTGGTCAGCGCCGCTGTCG
ACGTGGGCGGCACGCAAGCGGCACCAGGTCGGTACCGGCACCGGGAAGCG
TTCACGCGGTGTCTGCAGATGGTCCTGGTCATGGGCATGGACGAAGATGA
GTGGGAAGATGTACTCCGTGGTGGAGAGACAGCTGAAGTGGTGGACAAAT
TGAGTCGCGAAGAGAGGATGAGAGTGAGAGGAATGGTGAGACGGGTGTAA
TCCCTCACGTTTCACTTTTTTCCATACTCCCTGTCTATCTGACTATCTAT
CTACTACTTTCTTCTCGGCAGAGATTTAACTTTTCCCGTATTACTTTTCT
ACATCAGCAATAACATTAGCCCCCCTCCCCCAACTGACAGCGTCTTGTTA
AAAAAAATTACATACGCATTCTTTTCTTTGTATATAGTATACATGCATAC
TACACATACCAAGCTATGTTCCATCAGTTTTTTTTCACCGCTAAATTGCA
TGAGTATTTTGTTTGTTCATTCTCACAAAAATCGCGCCATGGACTGTCGA
GGTTACGGATTTCTCGGGTGGGGTACTTAG back to topCoding sequence (CDS) from alignment at ch4:2675935..2679064- >KJC3_005421-T1 ID=KJC3_005421-T1|Name=KJC3_005421-T1|organism=Aspergillus niger KJC3|type=CDS|length=4938bp|location=Sequence derived from alignment at ch4:2675935..2679064- (Aspergillus niger KJC3)
CCCCCGGAAGAGGGTGACAACCAGAAATTCGCCCTGCCGCAGTTCCTCCG
GGAATCCACTCTAGCGAAGAAAATCAATGACCGCCTGGCCTCTCCGTTCA
ACACCATGACCACATTCTTCTTCCGCCGGTCGGTCGAGAAGGCGTTCCAG
CTGGACGAACAGCCCTCTGGCCTGACCCTGAACCCGCAGAGACCGCTCAA
ATCCGAGCCGCCGCACATCACATCCGCCGTCGACGACATCATGTACATCG
TCAACAAGGTCCTGCAGCAGTCTCTCGTCACATCGCAAATCTCCGTCGTC
ACCAGCGTTGTGCCCACGCTCTCGCGCGTCCTCGGCTCCGACTTCATCGG
CATGACGCAGCGCAAGATGCGTGACGAATGCTACCCCCGCGCCGCCGTCC
AGGGCGGCCAACCCCCCGAGCAACTCGTCATCTCCTTCCTCGTCCTCATC
AACAACCTTGACGTCGCCGTCGATTACGTCCGCCGCATCCTACAGAACCA
TACCGAGCCCAAAAAGTCCATCGGCCCTGATGGCCAGCCCGAGGAAACCG
ACCCTCTGCGCTCGCTCTTCCCCGTCCCCGAGGAAGCCCGCCTCGCCACA
CAAACCCTCCAATCCCTCTCCGCCTCCTTCGAGTCCAAGGTCACCGACCT
CCTGGCAGACGGCATCCAAGTCGTCTTCAATAACGTCATTAAACACCGTC
TCCGCCCCATCCTCTCCGACGCCTTCCGCGACATCGAGTATCAACCCCGC
GAAGACACCGACCCTACCCGCACCATCTACCACGACTACGACTCCGACGA
TCCGGACTACATGGCGGATGGCACCGTCCCAGATGACGACGACCCTACCA
GCCGCGCAGAACTCGTCCGTCCGCGCTTCGCCGCCGCCTGGACCGAGCTG
CTCCTGCCCCTCAGCCGCATCCTCACCGCATCCGCCTTTGACCGTCTCCT
CACCGTCACCATCGCCTACCTCTCTCGACTCCTGGAGAAGCGTCTCTGGT
CTTACCACGGCCGTGTCAATGCCCTGGGCGCCACCCGCCTCGAACGCGAT
GTATCCGGGGTGGTCAGCGCCGCTGTCGACGTGGGCGGCACGCAAGCGGC
ACCAGGTCGGTACCGGCACCGGGAAGCGTTCACGCGGTGTCTGCAGATGG
TCCTGGTCATGGGCATGGACGAAGATGAGTGGGAAGATGTACTCCGTGGT
GGAGAGACAGCTGAAGTGGTGGACAAATTGAGTCGCGAAGAGAGGATGAG
AGTGAGAGGAATGGTGAGACGGGTGTAAATGTCCAATTCCTCGGCCGGCG
TGGCCAATGGCCATGCGGTGCCTCCCTCGCATCCCGCCCCCGACATCTTC
AATGCCAGCTCCGTTGCCGAGATCAAGGCCACCTTGTCGCACCTGCACCA
CCAGGAGGCCTCCGTTACAGCTCGTCTGGACGCCCTTGTGGCCTCCCAGA
AGGATTTCTCTCGCGAATTGGGAAGACTCGACTTACTCCGCGCCCATCTC
GGCTCCCAGACCAGCACCACCCGCGCCATCAGCCATGGCATGCTGGCCGA
TGCCGCAACCACCGCCGATCGCATATCCAGCGCCGTCCGCCGCCTCGATC
TAGAACAATCCCGCGTCAAGGCAACCCTGGAAGTGGTGGAACAGGTTTCG
GAACTCAAAGCCTGTGTGCTGGGCGTCGCAGGCTCCATGGGTGCGCCGCA
GGACTGGGAGACTGCTGCCAGCTATCTGAACCGAGCCTCCAAGATCCCCC
CGGAGGTCGCGCAGGGGGCCTTTGCCGCGGAAATGGTGCCGACGGCCGAG
GTGCCCGATCCACCGAATGTTACGCTTGATAACGCTGCTGAATCGCTCTG
TGGCTTGTTCCTGCGCGAATTCGACAAGGCTGTTAAAGAGAACAACGGTG
CCCGCATCACCCGCTTCTTCAAGCTCTTCCCCCTCATCGGTCGCTCCGAG
GTGGGTCTGGATGTCTACGGCCGCTATGTCTGTCAAGGCGTGGCGGCGCG
AGCTCGATCCAACCTCAATGCCGGCACAGGGGCTTCGCCAAGCAAGGACG
GCTTCTTCTACGCCAATGCGCTGACCAAGCTGTTCGAACATATCGCCCAG
ATCATCGATGGTCACGGCGGCCTGGTGGAGCGTCACTACGGCCCGCGCAA
GATGAATCGCGTTATTGAGCGTCTGCAGCTGGAGGCCGATGTTCAAGGTG
GCATCATCCTGGACACTTGGAGCGACGAGCGGCATGTCGACCGAAAGCTG
ACCGACACCAAGTCCTACGCTTTCACTTTCCTCGTGCAGAGCTTCCTCCC
TCCGCAGCGCAGCGGAACGCCCCGGTCCAACTCGCCTGCCGTACGGGATG
CCGCTGCGGCCGATGATGAGGGCGTGGATATGAAGGAGATTGACGGGCTT
CTCAACGAGATGGCCGTCATGCTTGGTCGCTGGTCCCTGTACTGCCGGTT
CTTGGCCGACACCTGCAATCCCCCGGAAGAGGGTGACAACCAGAAATTCG
CCCTGCCGCAGTTCCTCCGGGAATCCACTCTAGCGAAGAAAATCAATGAC
CGCCTGGCCTCTCCGTTCAACACCATGACCACATTCTTCTTCCGCCGGTC
GGTCGAGAAGGCGTTCCAGCTGGACGAACAGCCCTCTGGCCTGACCCTGA
ACCCGCAGAGACCGCTCAAATCCGAGCCGCCGCACATCACATCCGCCGTC
GACGACATCATGTACATCGTCAACAAGGTCCTGCAGCAGTCTCTCGTCAC
ATCGCAAATCTCCGTCGTCACCAGCGTTGTGCCCACGCTCTCGCGCGTCC
TCGGCTCCGACTTCATCGGCATGACGCAGCGCAAGATGCGTGACGAATGC
TACCCCCGCGCCGCCGTCCAGGGCGGCCAACCCCCCGAGCAACTCGTCAT
CTCCTTCCTCGTCCTCATCAACAACCTTGACGTCGCCGTCGATTACGTCC
GCCGCATCCTACAGAACCATACCGAGCCCAAAAAGTCCATCGGCCCTGAT
GGCCAGCCCGAGGAAACCGACCCTCTGCGCTCGCTCTTCCCCGTCCCCGA
GGAAGCCCGCCTCGCCACACAAACCCTCCAATCCCTCTCCGCCTCCTTCG
AGTCCAAGGTCACCGACCTCCTGGCAGACGGCATCCAAGTCGTCTTCAAT
AACGTCATTAAACACCGTCTCCGCCCCATCCTCTCCGACGCCTTCCGCGA
CATCGAGTATCAACCCCGCGAAGACACCGACCCTACCCGCACCATCTACC
ACGACTACGACTCCGACGATCCGGACTACATGGCGGATGGCACCGTCCCA
GATGACGACGACCCTACCAGCCGCGCAGAACTCGTCCGTCCGCGCTTCGC
CGCCGCCTGGACCGAGCTGCTCCTGCCCCTCAGCCGCATCCTCACCGCAT
CCGCCTTTGACCGTCTCCTCACCGTCACCATCGCCTACCTCTCTCGACTC
CTGGAGAAGCGTCTCTGGTCTTACCACGGCCGTGTCAATGCCCTGGGCGC
CACCCGCCTCGAACGCGATGTATCCGGGGTGGTCAGCGCCGCTGTCGACG
TGGGCGGCACGCAAGCGGCACCAGGTCGGTACCGGCACCGGGAAGCGTTC
ACGCGGTGTCTGCAGATGGTCCTGGTCATGGGCATGGACGAAGATGAGTG
GGAAGATGTACTCCGTGGTGGAGAGACAGCTGAAGTGGTGGACAAATTGA
GTCGCGAAGAGAGGATGAGAGTGAGAGGAATGGTGAGACGGGTGTAAATG
TCCAATTCCTCGGCCGGCGTGGCCAATGGCCATGCGGTGCCTCCCTCGCA
TCCCGCCCCCGACATCTTCAATGCCAGCTCCGTTGCCGAGATCAAGGCCA
CCTTGTCGCACCTGCACCACCAGGAGGCCTCCGTTACAGCTCGTCTGGAC
GCCCTTGTGGCCTCCCAGAAGGATTTCTCTCGCGAATTGGGAAGACTCGA
CTTACTCCGCGCCCATCTCGGCTCCCAGACCAGCACCACCCGCGCCATCA
GCCATGGCATGCTGGCCGATGCCGCAACCACCGCCGATCGCATATCCAGC
GCCGTCCGCCGCCTCGATCTAGAACAATCCCGCGTCAAGGCAACCCTGGA
AGTGGTGGAACAGGTTTCGGAACTCAAAGCCTGTGTGCTGGGCGTCGCAG
GCTCCATGGGTGCGCCGCAGGACTGGGAGACTGCTGCCAGCTATCTGAAC
CGAGCCTCCAAGATCCCCCCGGAGGTCGCGCAGGGGGCCTTTGCCGCGGA
AATGGTGCCGACGGCCGAGGTGCCCGATCCACCGAATGTTACGCTTGATA
ACGCTGCTGAATCGCTCTGTGGCTTGTTCCTGCGCGAATTCGACAAGGCT
GTTAAAGAGAACAACGGTGCCCGCATCACCCGCTTCTTCAAGCTCTTCCC
CCTCATCGGTCGCTCCGAGGTGGGTCTGGATGTCTACGGCCGCTATGTCT
GTCAAGGCGTGGCGGCGCGAGCTCGATCCAACCTCAATGCCGGCACAGGG
GCTTCGCCAAGCAAGGACGGCTTCTTCTACGCCAATGCGCTGACCAAGCT
GTTCGAACATATCGCCCAGATCATCGATGGTCACGGCGGCCTGGTGGAGC
GTCACTACGGCCCGCGCAAGATGAATCGCGTTATTGAGCGTCTGCAGCTG
GAGGCCGATGTTCAAGGTGGCATCATCCTGGACACTTGGAGCGACGAGCG
GCATGTCGACCGAAAGCTGACCGACACCAAGTCCTACGCTTTCACTTTCC
TCGTGCAGAGCTTCCTCCCTCCGCAGCGCAGCGGAACGCCCCGGTCCAAC
TCGCCTGCCGTACGGGATGCCGCTGCGGCCGATGATGAGGGCGTGGATAT
GAAGGAGATTGACGGGCTTCTCAACGAGATGGCCGTCATGCTTGGTCGCT
GGTCCCTGTACTGCCGGTTCTTGGCCGACACCTGCAAT back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_005421-T1.utr3p1 | KJC3_005421-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR013167 |
| DBxref | PFAM:PF08318 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch4 | supercontig | ch4:2675935..2679064 - |
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