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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:2759940..2764938- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_005445-T1 ID=KJC3_005445-T1|Name=KJC3_005445-T1|organism=Aspergillus niger KJC3|type=mRNA|length=4999bp|location=Sequence derived from alignment at ch4:2759940..2764938- (Aspergillus niger KJC3)
GGCTGGTTGAAAGTCTCCTGCTAGCCCCAATTCCTGGCACAGTCGTTGAT
TGATCAATCATTTACGGCCAAAATGACCGATCGCAATGTGGGAAAAGCAA
AGCCCCAATTGATGCGTCTCAGGGGATGACATAACGCCTGGAGGCGCTGA
TACCGCTGCAGGGCGATAGAACGGATTATAGGCTTCTCAGCATTTGCTAC
GGCCGAAATTACGCTGTCTCCCGAACATGTTGATCGGTCACCGTCTGAAT
ATCAATCAGAAGGGGTTGTTCTCGGGCAGGCTACGTGATACCTCCCATTC
TGAGACCGATTGATAGCAGAACAAGGCGCTTGAATCTGCGTGGAAGCGCA
GCGTGCTTGCTGAGTGGGAAAGCCGCTGCTTAGTGCTGCTAATGCGACGG
ATGACAGATGGTTGGATGGAGTCCTTTTCCCCATCTTTTGCCTCAAAAGT
ATGGATCTGCTAAAACCTTTCACTCCACAAGAATTGATTACGCTATTACT
ATAATTATCCATTGGGACTTTTCCCGCAGTCAAAATGATGGTTCAGGTTC
ACTATGGAGCATTGACTGGTTGAGGAATCCTTCTGCCGCAAATCCCCTTT
CTTACCCACCTGCTTTTTTCCCCCCTTTGATACATCGATTACATACTTGC
TGCTTTGTCTCGGCCCATTCCTTGCTTACCTGACCCTGTACCAGTCTGTC
TCCTTTTGGCTAGTTCCTCGCGTTCTTCACTATCTGGGATTGTTGGTTCT
CCCACAACAGTTCCCTTGGTTCGAGTGTGACTTTTGTTTAATTACTCGGG
TTGTTGATGATAATTTTCTGATAAGCTTTCTTTTGTTTGATTACTGTTTA
CTTTTCAGTTTCATAAGATAGTTTGGGGAAAGCACAAGAGAAGAATTGGA
GGGTGTTGTTCTTGTTCTTTTTTCGCGGATATCATTCATCATTATCTTTA
TTTTCCTCTCACTATTTATCGCGCCTGTGTCCCTCAAACACGCGCCCCCC
TTTTTCCCCTACCAGGGGCCCTCTTTTTTCCTCACCCTTCTTTTCCGCTT
AACTTGTCCTGGCGGCTGTAATCTTTTAGTTTAATTGTCCTTTGCAATTA
CTTTCTCTCTTTCCCTTTGCTTTTCTTTACTCTTCGTCTACTGTTATTAC
CACTTATCCCTTTTCAGTTGGATTGTCGGCGGCCTTTGGATACCTTCTTT
GTCAACGTTTGGGTCCGCTGCAACCTGGCACTCTGGCAGGTCTGGGGCGT
TCTCCCTCTCCAGTACTCCGTACTCTCATTTGACAGGGCCATCTTTATTT
CTATCATTATTTTTATCTTTTTATCTTTGTCCTTTCCATTCTAATCTCGG
TTGGTTCTCAGTCGGAGCACAACTTCACTCTTGCTTTAGTCTCTCGGCCT
CCTCAACCCGCAAAGCCCCCTAAAGCAACTAAACCAGCGCAGGTTTGTCT
CCGTTTCCACCAACTCAACCACTCATTGTCCATGCACATTCCAATTGACT
AGCGGGATCCCTTCTAGACACGTCCTTATTGGCAGTCTTTCTGCTCCGTG
CTCTTTGCCGTCCTTTCTGCTCTTCTTTCTCATTTTGATTACCCTCATTC
TGGCCTCTCCAGGTCTCTGTTTTCTTCCTTATTTCCCCCCTTCTCTTTTC
GGGGGTGATCTTCGGGCCCGGCCTTTTTTCCCTCCCTCCTGGCCATTCCT
ACCGTGTTGATTGCCTAGTACGTCTCCCCCTTGACTAAGTGATATCGTCT
ATTTCTCATCGACCACGAACTCATCTTATTCCGTTTCTCTTCATTAGGGG
GACAATTGTGTCCTACTCGCTCCCTCTCCTCGCCATGCAAACCTCCGATG
CAAGCATTCCGAGTCGTCTGATCCCTTCCAAGTTTTCCCACCTCAACGCG
GACAGCACCGGTTTCTCTCACGGAGCATACGCCTCCAACAATATTCCCCT
GCAGGGCCTAACGGACCGGAACGCTCGTCGAGCCAATATCCCTGCCATTA
ATACCTCTGCTCCCGTTTCGGACAACATGGCCGCCTCTGGCGCCGCGTTC
GACATGAACTTCACTCCCCTACTACCCTCTCAGTTGTTGCTTGGTAGCCC
CTTCCAGCCCGGTACTCCCTCCGCGTTCGCCTCGCCTCAATTCGCCAATT
TCGGTGGCTTTCCTCAGACGAATGCCTCTTCACATGCCCAGAATCACCAG
AGCCACCATCAGCTCGGAAGTCCGACCCAGCCCTCGCAGAATGCTGGCCT
ATATTCTGGTATGATGTCGACGGATGGTATAGGTAACTCTCAAATGCTGG
GGGCCCCTCAATCTCCTGTTGGTGGTTTGGGGCCCATGGGCAACGCAGCG
TACGGAAGTCCCGCTGCCTCGGTAACCCCTGGCTTGCTTTCGGGTACGAG
CCGAACCGTATACCTAGGCAATATTCCGGCAGAAACCTCCGCGGAAGAAA
TCTTGAACCATGTTCGAAGCGGCCAAATTGAGTCGGTTCGTTTGCTTCCT
GACAAGAACTGTGCTTTCATCTCCTTCCTGGACAGCAACTCCGCAACCCA
CTTTCACTCGGATGCAATCTTGAAGAAGCTTGCAATCAAGGGAAATGATA
TCAAGGTGGGTTGGGGCAAAGCATCTCAGGTGCCTACTTCGGTCGCTTTG
GCTGTGCAGCAGTCCGGCGCATCACGGAATGTATACTTGGGGAACCTGTC
GGAGGACATGACAGAGGAAGAACTGCGGGAGGAGCTAGGAAAATTCGGCC
CCATTGACACCGTCAAGATAGTCAAGGAGAAAGCGATTGGATTTGTCCAC
TTCTTGTCGATCAGCAATGCAATGAAGGCTGTTTCTCAACTTCCTCAGGA
GGCTAAGTGGCAGGCACCCAGGCGGGTATTCTACGGCAAAGATCGGTGCG
CTTATGTTTCCAAAACTCAGCAGCAAAATGCAGCTCAGTTCTTGGGCATT
GCCCCTGGTTATGCACACATTCTCAATTCGGCGGACCGTGATTTGATCAC
CAACGCACTCGCTCAGCAATCTGTCGCCGCCGCGGCTGTGGCCACCACAG
CCGGTGGAGTCAACAACTTGGGCAACCGGACCATCTATTTGGGCAACATT
CACCCCGAAACGACTATCGAGGAGATTTGCAATGTCGTGCGTGGTGGTTT
GCTACATCATATTCGCTACATTCCCGATAAGCATATCTGCTTTGTCACTT
TCATTGATCCTACGTCAGCCGCGTCCTTTTACGCCCTGAGCAACCTGCAG
GGCCTCATGATTCATAACCGTCGTCTGAAGATTGGCTGGGGTAAGCATTC
CGGTCCTCTTCCGCCGGCCATTGCCCTGGCCGTGAGTGGCGGAGCTTCTC
GAAATGTCTATGTCGGTAACCTCGATGAGACCTGGTCGGAGGAGCGCCTT
CGCCAAGACTTCTCCGAGTATGGAGAGATCGAGCTTGTCAACACGCTCCG
TGAAAAGAGCTGCGCATTCGTCAATTTTACCAACATTGCCAATGCCATTA
AGGCAATTGAAGGGATGCGGAACCGGGATGAATACAAGCGATTCAAGATC
AATTTCGGGAAGGATCGCTGCGGTAATCCCCCGCGTCAAGCCGGCAATGG
AGGTCCGCAGGGTCGCAATGGGTCCGGGTTTGAGGGGCCTCAGTCACCTT
CCCCAGCTTTGAATGGCTTCCAGCAGAACCTAAGCCAATCTGGCTCGGGC
TCTAGCCCGACTCATCCTGCCCTCTCTCCTGCTCCTGGGTCTACGGGTTC
TCAGAACGGCCAGCACCACAGGCATCCCCTGCAGACGGTCTCATCCCCAT
CTGGCATTCTAAATGTCGGTGCCAACAATCCGTTGACCATGTACCTCAAC
CAAATGTCCGCCCAGCAAGCCCAGGAGCAGGAAAACCGGCTGAACGACCC
CATGACCTTGGCTGGTCTTCAGTCCCAGCCTCAACCGCCGCAACAGCAGT
CGCTCTACAATGGCGCCAGCACTGGTGAGCTTTCCAATGGCAGCATCGAA
GCCCCATTGCATCAGCACAAGCCGTCGACCAACGGATTCTTGAACGTAAC
CAATGGATCTACGGGCCCCGGCCACCACGCTACCGCTAGCACCAGCAGCC
TGAATGTACCACGGGCGCAGCATTCCCGGGCCGTGAGTTTGCCTTCGTTC
TCTCAGGAGCCTTTCGGATCTGTTTCAAGCCAGCCTCCCCGCTCCGGACT
TGCTCATCAGCCGCAAAGCAGCTTTTCAAGCTTCACCTCTGCCCTAGGCG
GTCTCAGCCACGCCGGCTTCGGATTGGCCATCCAGAACGAGAGTTCGCTG
CCCGGCTGGGCTGAGGAGGAGATTGGGGCCAAATAATCGCACCCTGTCGC
CGCAAGGATGATGCCCGCTATTCCACTTGATGAGCATAGCCATTCTTCTT
CCGCGTTCTGTTCCATCTATATTGCTTTGCCACTTGGCTAATTCCTTCGA
TGTCTCCATTCCGATTCCTTTCTTTGTATTGGTTTCATTTCACTTCACTT
TGGTTTTTCTCTCTTTTAATTGTGCAAATTTCCTTTCTCCGGCAACCCCC
TCTTACCGATTTTAATATTCCTTTATTCCTATACCATCACTTGTATTGCT
AGCTGGGCATGATCTTCTTCATCTTCTTTTGCCTTTCTTTCTTGTCATTT
CCATACATTGATTCTGCTTTTTTTTGGCCATTTTGCCGTTTCTGATCTCC
AGTTGGCTACGAAGGCGGGTGAGAGCACAGCCAGATCCTACGCCGGTTTC
GGTGGGGTCTATTGATGTCTCAGGCTGCTTATTTGCATATGTGATGCCAT
TCAACGGAACTAATCCCGAGCATAGAGCTCCCCTGTTGCATTTTGATTAC
GACAAGGGTTTATATAGCGGCGGAGGTAATTGATCCAGGATGATAATAGT
GGATCCGCCAGCAAGGAACATAAGAAAGACGAGAAGAAGAGTGCTCAGTG
CATAAGAAATGACAGACATGTGGTCACAATATCAAATGACTCCCCAAGG back to topCoding sequence (CDS) from alignment at ch4:2759940..2764938- >KJC3_005445-T1 ID=KJC3_005445-T1|Name=KJC3_005445-T1|organism=Aspergillus niger KJC3|type=CDS|length=2502bp|location=Sequence derived from alignment at ch4:2759940..2764938- (Aspergillus niger KJC3)
ATGCAAACCTCCGATGCAAGCATTCCGAGTCGTCTGATCCCTTCCAAGTT
TTCCCACCTCAACGCGGACAGCACCGGTTTCTCTCACGGAGCATACGCCT
CCAACAATATTCCCCTGCAGGGCCTAACGGACCGGAACGCTCGTCGAGCC
AATATCCCTGCCATTAATACCTCTGCTCCCGTTTCGGACAACATGGCCGC
CTCTGGCGCCGCGTTCGACATGAACTTCACTCCCCTACTACCCTCTCAGT
TGTTGCTTGGTAGCCCCTTCCAGCCCGGTACTCCCTCCGCGTTCGCCTCG
CCTCAATTCGCCAATTTCGGTGGCTTTCCTCAGACGAATGCCTCTTCACA
TGCCCAGAATCACCAGAGCCACCATCAGCTCGGAAGTCCGACCCAGCCCT
CGCAGAATGCTGGCCTATATTCTGGTATGATGTCGACGGATGGTATAGGT
AACTCTCAAATGCTGGGGGCCCCTCAATCTCCTGTTGGTGGTTTGGGGCC
CATGGGCAACGCAGCGTACGGAAGTCCCGCTGCCTCGGTAACCCCTGGCT
TGCTTTCGGGTACGAGCCGAACCGTATACCTAGGCAATATTCCGGCAGAA
ACCTCCGCGGAAGAAATCTTGAACCATGTTCGAAGCGGCCAAATTGAGTC
GGTTCGTTTGCTTCCTGACAAGAACTGTGCTTTCATCTCCTTCCTGGACA
GCAACTCCGCAACCCACTTTCACTCGGATGCAATCTTGAAGAAGCTTGCA
ATCAAGGGAAATGATATCAAGGTGGGTTGGGGCAAAGCATCTCAGGTGCC
TACTTCGGTCGCTTTGGCTGTGCAGCAGTCCGGCGCATCACGGAATGTAT
ACTTGGGGAACCTGTCGGAGGACATGACAGAGGAAGAACTGCGGGAGGAG
CTAGGAAAATTCGGCCCCATTGACACCGTCAAGATAGTCAAGGAGAAAGC
GATTGGATTTGTCCACTTCTTGTCGATCAGCAATGCAATGAAGGCTGTTT
CTCAACTTCCTCAGGAGGCTAAGTGGCAGGCACCCAGGCGGGTATTCTAC
GGCAAAGATCGGTGCGCTTATGTTTCCAAAACTCAGCAGCAAAATGCAGC
TCAGTTCTTGGGCATTGCCCCTGGTTATGCACACATTCTCAATTCGGCGG
ACCGTGATTTGATCACCAACGCACTCGCTCAGCAATCTGTCGCCGCCGCG
GCTGTGGCCACCACAGCCGGTGGAGTCAACAACTTGGGCAACCGGACCAT
CTATTTGGGCAACATTCACCCCGAAACGACTATCGAGGAGATTTGCAATG
TCGTGCGTGGTGGTTTGCTACATCATATTCGCTACATTCCCGATAAGCAT
ATCTGCTTTGTCACTTTCATTGATCCTACGTCAGCCGCGTCCTTTTACGC
CCTGAGCAACCTGCAGGGCCTCATGATTCATAACCGTCGTCTGAAGATTG
GCTGGGGTAAGCATTCCGGTCCTCTTCCGCCGGCCATTGCCCTGGCCGTG
AGTGGCGGAGCTTCTCGAAATGTCTATGTCGGTAACCTCGATGAGACCTG
GTCGGAGGAGCGCCTTCGCCAAGACTTCTCCGAGTATGGAGAGATCGAGC
TTGTCAACACGCTCCGTGAAAAGAGCTGCGCATTCGTCAATTTTACCAAC
ATTGCCAATGCCATTAAGGCAATTGAAGGGATGCGGAACCGGGATGAATA
CAAGCGATTCAAGATCAATTTCGGGAAGGATCGCTGCGGTAATCCCCCGC
GTCAAGCCGGCAATGGAGGTCCGCAGGGTCGCAATGGGTCCGGGTTTGAG
GGGCCTCAGTCACCTTCCCCAGCTTTGAATGGCTTCCAGCAGAACCTAAG
CCAATCTGGCTCGGGCTCTAGCCCGACTCATCCTGCCCTCTCTCCTGCTC
CTGGGTCTACGGGTTCTCAGAACGGCCAGCACCACAGGCATCCCCTGCAG
ACGGTCTCATCCCCATCTGGCATTCTAAATGTCGGTGCCAACAATCCGTT
GACCATGTACCTCAACCAAATGTCCGCCCAGCAAGCCCAGGAGCAGGAAA
ACCGGCTGAACGACCCCATGACCTTGGCTGGTCTTCAGTCCCAGCCTCAA
CCGCCGCAACAGCAGTCGCTCTACAATGGCGCCAGCACTGGTGAGCTTTC
CAATGGCAGCATCGAAGCCCCATTGCATCAGCACAAGCCGTCGACCAACG
GATTCTTGAACGTAACCAATGGATCTACGGGCCCCGGCCACCACGCTACC
GCTAGCACCAGCAGCCTGAATGTACCACGGGCGCAGCATTCCCGGGCCGT
GAGTTTGCCTTCGTTCTCTCAGGAGCCTTTCGGATCTGTTTCAAGCCAGC
CTCCCCGCTCCGGACTTGCTCATCAGCCGCAAAGCAGCTTTTCAAGCTTC
ACCTCTGCCCTAGGCGGTCTCAGCCACGCCGGCTTCGGATTGGCCATCCA
GAACGAGAGTTCGCTGCCCGGCTGGGCTGAGGAGGAGATTGGGGCCAAAT
AA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003676 | nucleic acid binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_005445-T1.utr3p1 | KJC3_005445-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG09261ZFN |
| DBxref | InterPro:IPR035979 |
| DBxref | InterPro:IPR034195 |
| DBxref | InterPro:IPR018835 |
| DBxref | InterPro:IPR012677 |
| DBxref | InterPro:IPR000504 |
| DBxref | PFAM:PF00076 |
| DBxref | PFAM:PF10378 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch4 | supercontig | ch4:2759940..2764938 - |
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