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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:2797410..2800044+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_005456-T1 ID=KJC3_005456-T1|Name=KJC3_005456-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2635bp|location=Sequence derived from alignment at ch4:2797410..2800044+ (Aspergillus niger KJC3)
CCCAAAATTTGAACCGTCACAATGATGCCACCCCCCTAAGCCAGAACACA
TATAAATTCGAGTAATCCCCTGGTCCAACCCGGACTGACCATGGCCATCA
AGTCTTCAATACTTTACGAAAACCCCAGTGCCACCGCCTTTGTGGTCGAT
ATTCCCAGCTCCATCGCGCAAGCACAAGCGCTTCCAGGACAGGACTTTCC
GCCATCACGACCCCATCCAGCCCCTTCTGCTTCAGGATCTTATCATGGAG
GAAGAGTTCTTTTATCTTCCACCCCTCTAAGGGAACCTTATCCATCGTCA
ACGGAGCCCAAGACTGAGGCTGCGCGGGCGAGGGTTCTAGAGAGAATCCC
GCTTTCCGAAAGACGCTATCACTCCGAGCTCATCGAACCCCTGGTGACTG
AGAAGCTAACGGAGCTTAATGCAGCACTCGAAAATAACAATGAGTGGTGC
CTGCCTCGTATCATTGTAGATAGCGATGCACAAGGCAGCCCGGGTGATCC
AACCCAGGGTGGATATGAGCAGATTCAGCCAGGGAAGAGGAAACGACAAC
GCAGCATTGCCGCATGTTCATGTTCATGTCCAAATCAAGACTCTGGCTCT
ACCCACTCAAATAGAATCTCTACTCGCGATGACCCTCCATTGATTCTATC
GCCTGGAGATAACGCCTTCTCATCCATCTCAGAGCTATCCAATACCGTGG
TCAAAAACAAATCCATCGAGCCAGCTACAGTGAAAATACGCTGTCAATCG
ACGACAGATGAATTGAATAATGATAGAACAACAACCCACAACTACCACTC
CTTCCACATCCCCCCATTATCACGCTTCCTCCGCTGCACCATCCCAATCT
CCGAACCCATCCAGGAGAAATCACATCACCACTACCACCACCACCAGGCA
TTGATCCCCGGTCTACCACACGAGCAAAAGTTCAATCTAATCCTCCTCGA
CCCACCATGGACAAACCGCTCCGTTCGGCGCAGTGGTCATTATCAGACGC
AGTTCTATAAAGGATGGGATCTTCTCACGCAACGCATACGTGATATATTG
CGGGGACATTTGCAATATGATAATGCTTTTGACAGAGAAGAAGGCACGAC
AGATACTAAGGCCCCGATAGCAGCGATCTGGATCACTAATTCCGCAAAGG
CACGGAAAACAGCCTATGAGGCTATTCGGGGTGCTGGGCTTGAGGTCTGT
GAGGAGTGGGTTTGGCTTAAGACGACTATGGATGGGAGGCCGATTACGGA
GGTGGGTGGGTTGTGGAGGAAGCCGTATGAGGTCCTTGTTATTGGGAGGC
AGGTGCGTGAATCCTCTGAGGATGGGGATGTTGTCAGGAGGGTTATTGCG
GCTGTTCCGGATGTGCATTCTCGGAAGCCGAATTTGAAGGAGCTGTTTGA
GAGGATGTTCTTTAGCTCTCTGGAGGGGGGTTGTGTGCCGTATAATGCTT
TAGAGGTCTTTGCGCGGAATCTGACTGCTGGATGGTGGGCTTGTGGGGAT
GATGTTCTTAAGTTCAATTCGGAGGAATGGTGGGTTGATGATACTGAAGA
AGGCAAAGATATGTGAGCTTGATATACTCATACAACAACAACAACAAGAA
TCCCCAACTTCATCCACCATATCCGGGTATACAACATCCCCCCTTCACTA
ACTCGATAATCAGTCAAAAACCTCCCCCAAACTAACAAGACTAAACCTCA
AATCTCCATCCCCGCTCCCCTTCTCGACCTCCAAGAACCTTCTTACCCCC
AACTGCAAAGCCCTCTCACTCAACGCATCCTCCCCCTCCTCAAGAACCCC
CCTAACCAACGGCCCCTTCCTCCTCCCATCCAACTCCCACAAAGTCCCAT
CCTCACCCTTCACAAACGCCACAAAATGCAAGTCCACCGAGTCCTCGGCC
GCCGGCGCATCCGTATCCCCCAGTTTCGCCGCATCGGCATGCGCACTCTC
CAACGCCTTACTCTCATACAACAGATCCGCGCGCTGAATCGGCCCCAAAC
CCTCCGCTTCCTTGAGCAGGTTATCTAGATCGGACCCAGGGGTGATGTGC
TTCCGCGGCGTGCCGTTCGACACGGCGTGCAGGAGCCCGATTAGCCCGCA
GGCGTTGCGGATGGTTTGCTTGAACCACATGACGGGCTCGTTGGGACCTG
AGCCGGTGTAATCAGGGAGAGGCGCGTCTTCGGTTCGGCGGGTGGCTTCG
TAGGCGGCGGAGACGGGGAAGACGAGGAGGAGGGCGTAGGAGGGGCGGGG
GATGAAGGCGAGGAGGTCCGGGCTGTCGATTGACCACACGTCTGTGAAGC
CGAGGGTTGGGGAGAGGCCGAGTTGGCGGACGAGGTGGGTCATTACTTCG
GGGTTATTTTCTGTGGTGCAATAATAGTGGTGATAATGGTTAGTTGGTGT
GGTTATATGTGGTGTTTTGGGGGGAGGGAAGGAGGGGGTACCGAGGGGCA
CGAAGGCCTTGTTGGTTTGGGGGGCATCTGCTGTGTCGGTCATTTTGGTG
CTGTGTAGATTGTATGTAGTGGTTATGTTTGTTGTTGATCGGTGGAAAGG
GTGATACTGTGAGGGGTGAAAGAGAAGTGTAAGAAAGTTTGCGATGGATG
GCGCGCCGTGAGGGGTTGACGTCGTTGGTGTTGCG back to topCoding sequence (CDS) from alignment at ch4:2797410..2800044+ >KJC3_005456-T1 ID=KJC3_005456-T1|Name=KJC3_005456-T1|organism=Aspergillus niger KJC3|type=CDS|length=1476bp|location=Sequence derived from alignment at ch4:2797410..2800044+ (Aspergillus niger KJC3)
ATGGCCATCAAGTCTTCAATACTTTACGAAAACCCCAGTGCCACCGCCTT
TGTGGTCGATATTCCCAGCTCCATCGCGCAAGCACAAGCGCTTCCAGGAC
AGGACTTTCCGCCATCACGACCCCATCCAGCCCCTTCTGCTTCAGGATCT
TATCATGGAGGAAGAGTTCTTTTATCTTCCACCCCTCTAAGGGAACCTTA
TCCATCGTCAACGGAGCCCAAGACTGAGGCTGCGCGGGCGAGGGTTCTAG
AGAGAATCCCGCTTTCCGAAAGACGCTATCACTCCGAGCTCATCGAACCC
CTGGTGACTGAGAAGCTAACGGAGCTTAATGCAGCACTCGAAAATAACAA
TGAGTGGTGCCTGCCTCGTATCATTGTAGATAGCGATGCACAAGGCAGCC
CGGGTGATCCAACCCAGGGTGGATATGAGCAGATTCAGCCAGGGAAGAGG
AAACGACAACGCAGCATTGCCGCATGTTCATGTTCATGTCCAAATCAAGA
CTCTGGCTCTACCCACTCAAATAGAATCTCTACTCGCGATGACCCTCCAT
TGATTCTATCGCCTGGAGATAACGCCTTCTCATCCATCTCAGAGCTATCC
AATACCGTGGTCAAAAACAAATCCATCGAGCCAGCTACAGTGAAAATACG
CTGTCAATCGACGACAGATGAATTGAATAATGATAGAACAACAACCCACA
ACTACCACTCCTTCCACATCCCCCCATTATCACGCTTCCTCCGCTGCACC
ATCCCAATCTCCGAACCCATCCAGGAGAAATCACATCACCACTACCACCA
CCACCAGGCATTGATCCCCGGTCTACCACACGAGCAAAAGTTCAATCTAA
TCCTCCTCGACCCACCATGGACAAACCGCTCCGTTCGGCGCAGTGGTCAT
TATCAGACGCAGTTCTATAAAGGATGGGATCTTCTCACGCAACGCATACG
TGATATATTGCGGGGACATTTGCAATATGATAATGCTTTTGACAGAGAAG
AAGGCACGACAGATACTAAGGCCCCGATAGCAGCGATCTGGATCACTAAT
TCCGCAAAGGCACGGAAAACAGCCTATGAGGCTATTCGGGGTGCTGGGCT
TGAGGTCTGTGAGGAGTGGGTTTGGCTTAAGACGACTATGGATGGGAGGC
CGATTACGGAGGTGGGTGGGTTGTGGAGGAAGCCGTATGAGGTCCTTGTT
ATTGGGAGGCAGGTGCGTGAATCCTCTGAGGATGGGGATGTTGTCAGGAG
GGTTATTGCGGCTGTTCCGGATGTGCATTCTCGGAAGCCGAATTTGAAGG
AGCTGTTTGAGAGGATGTTCTTTAGCTCTCTGGAGGGGGGTTGTGTGCCG
TATAATGCTTTAGAGGTCTTTGCGCGGAATCTGACTGCTGGATGGTGGGC
TTGTGGGGATGATGTTCTTAAGTTCAATTCGGAGGAATGGTGGGTTGATG
ATACTGAAGAAGGCAAAGATATGTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0008168 | methyltransferase activity |
| GO:0003676 | nucleic acid binding |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0032259 | methylation |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_005456-T1.utr5p1 | KJC3_005456-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR002052 |
| DBxref | InterPro:IPR007757 |
| DBxref | PFAM:PF05063 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch4 | supercontig | ch4:2797410..2800044 + |
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