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KJC3_005465-T1, KJC3_005465-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_005465-T1
Unique NameKJC3_005465-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch4:2819063..2819800-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_005465-T1 ID=KJC3_005465-T1|Name=KJC3_005465-T1|organism=Aspergillus niger KJC3|type=mRNA|length=738bp|location=Sequence derived from alignment at ch4:2819063..2819800- (Aspergillus niger KJC3)
ATGGGTCACTCGCACGGTTTGAGAGCCGGTACTCGGGTATGTCGATTTTA
CCCAGGAATTTTTGCAGCACCTTTTCGCTGGTCCGAGACGCGAGCGCTGA
CGAACTTTTCAGTATGCCTTCAGCCGTAACTTCAAGGAGAACGGCCAGAT
CCGCCTGTCGACCTACCTGAAGACCTACCGGTACGCCGAAAATTCTCGCC
GATTTGGATAATATTTGCGTCAAGGAGCAGGATCTGATATTTTTTCATAG
GGTTGGCGACATTGTCGATATCAAGGTCAACGGTGCCGTTCAGAAGGGGT
CAGTACAAATTCCGCCCGGTGCAATAATGGGGATTCCGACATGAAGGGTT
TTGCGTGTTGGGATTCTCGAAATTTTGAGCGAAGAATTGGTTTGCTGAGA
CATTTGGAAATAGTATGCCCTACAAGGTCTACAACGGTAAGACCGGTGTC
GTCTACAACGTGACCAAGTCCTCCGTCGGTGTCCTCCTCTACAAGGTCGT
CCGCAACCGCTACCTCGAGAAGCGCATCAACGTCCGCATCGAGCACGTCA
AGCACTCCCGCTCCCGCGAGGACTTCATCAAGCGTGTCAAGGAGAACGCC
CAGAAGAAGCGCCAGGCCAAGGAGCAGGGTGTCCACCTCCACTTGAAGCG
TCAGCCCGCCATGCCCCGTGAGGCTCACCTCGTCGAGGGTACCGCTGCCG
AGACCATCACCCCCATCCCCTACGACACCCACATCTAA
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Coding sequence (CDS) from alignment at ch4:2819063..2819800-

>KJC3_005465-T1 ID=KJC3_005465-T1|Name=KJC3_005465-T1|organism=Aspergillus niger KJC3|type=CDS|length=1908bp|location=Sequence derived from alignment at ch4:2819063..2819800- (Aspergillus niger KJC3)
TATGCCCTACAAGGTCTACAACGGTAAGACCGGTGTCGTCTACAACGTGA
CCAAGTCCTCCGTCGGTGTCCTCCTCTACAAGGTCGTCCGCAACCGCTAC
CTCGAGAAGCGCATCAACGTCCGCATCGAGCACGTCAAGCACTCCCGCTC
CCGCGAGGACTTCATCAAGCGTGTCAAGGAGAACGCCCAGAAGAAGCGCC
AGGCCAAGGAGCAGGGTGTCCACCTCCACTTGAAGCGTCAGCCCGCCATG
CCCCGTGAGGCTCACCTCGTCGAGGGTACCGCTGCCGAGACCATCACCCC
CATCCCCTACGACACCCACATCTAAGGTTGGCGACATTGTCGATATCAAG
GTCAACGGTGCCGTTCAGAAGGGTATGCCTTCAGCCGTAACTTCAAGGAG
AACGGCCAGATCCGCCTGTCGACCTACCTGAAGACCTACCGATGGGTCAC
TCGCACGGTTTGAGAGCCGGTACTCGGTATGCCCTACAAGGTCTACAACG
GTAAGACCGGTGTCGTCTACAACGTGACCAAGTCCTCCGTCGGTGTCCTC
CTCTACAAGGTCGTCCGCAACCGCTACCTCGAGAAGCGCATCAACGTCCG
CATCGAGCACGTCAAGCACTCCCGCTCCCGCGAGGACTTCATCAAGCGTG
TCAAGGAGAACGCCCAGAAGAAGCGCCAGGCCAAGGAGCAGGGTGTCCAC
CTCCACTTGAAGCGTCAGCCCGCCATGCCCCGTGAGGCTCACCTCGTCGA
GGGTACCGCTGCCGAGACCATCACCCCCATCCCCTACGACACCCACATCT
AAGGTTGGCGACATTGTCGATATCAAGGTCAACGGTGCCGTTCAGAAGGG
TATGCCTTCAGCCGTAACTTCAAGGAGAACGGCCAGATCCGCCTGTCGAC
CTACCTGAAGACCTACCGATGGGTCACTCGCACGGTTTGAGAGCCGGTAC
TCGGTATGCCCTACAAGGTCTACAACGGTAAGACCGGTGTCGTCTACAAC
GTGACCAAGTCCTCCGTCGGTGTCCTCCTCTACAAGGTCGTCCGCAACCG
CTACCTCGAGAAGCGCATCAACGTCCGCATCGAGCACGTCAAGCACTCCC
GCTCCCGCGAGGACTTCATCAAGCGTGTCAAGGAGAACGCCCAGAAGAAG
CGCCAGGCCAAGGAGCAGGGTGTCCACCTCCACTTGAAGCGTCAGCCCGC
CATGCCCCGTGAGGCTCACCTCGTCGAGGGTACCGCTGCCGAGACCATCA
CCCCCATCCCCTACGACACCCACATCTAAGGTTGGCGACATTGTCGATAT
CAAGGTCAACGGTGCCGTTCAGAAGGGTATGCCTTCAGCCGTAACTTCAA
GGAGAACGGCCAGATCCGCCTGTCGACCTACCTGAAGACCTACCGATGGG
TCACTCGCACGGTTTGAGAGCCGGTACTCGGTATGCCCTACAAGGTCTAC
AACGGTAAGACCGGTGTCGTCTACAACGTGACCAAGTCCTCCGTCGGTGT
CCTCCTCTACAAGGTCGTCCGCAACCGCTACCTCGAGAAGCGCATCAACG
TCCGCATCGAGCACGTCAAGCACTCCCGCTCCCGCGAGGACTTCATCAAG
CGTGTCAAGGAGAACGCCCAGAAGAAGCGCCAGGCCAAGGAGCAGGGTGT
CCACCTCCACTTGAAGCGTCAGCCCGCCATGCCCCGTGAGGCTCACCTCG
TCGAGGGTACCGCTGCCGAGACCATCACCCCCATCCCCTACGACACCCAC
ATCTAAGGTTGGCGACATTGTCGATATCAAGGTCAACGGTGCCGTTCAGA
AGGGTATGCCTTCAGCCGTAACTTCAAGGAGAACGGCCAGATCCGCCTGT
CGACCTACCTGAAGACCTACCGATGGGTCACTCGCACGGTTTGAGAGCCG
GTACTCGG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005840ribosome
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
Vocabulary: Molecular Function
TermDefinition
GO:0003735structural constituent of ribosome
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_005465KJC3_005465Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005465-T1KJC3_005465-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005465-T1.cdsKJC3_005465-T1.cdsAspergillus niger KJC3CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005465-T1.exon4KJC3_005465-T1.exon4Aspergillus niger KJC3exon
KJC3_005465-T1.exon3KJC3_005465-T1.exon3Aspergillus niger KJC3exon
KJC3_005465-T1.exon2KJC3_005465-T1.exon2Aspergillus niger KJC3exon
KJC3_005465-T1.exon1KJC3_005465-T1.exon1Aspergillus niger KJC3exon


Properties
Property NameValue
DBxrefInterPro:IPR008991
DBxrefInterPro:IPR018259
DBxrefInterPro:IPR001147
DBxrefInterPro:IPR036948
DBxrefPFAM:PF01157
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch4supercontigch4:2819063..2819800 -
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