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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:2990008..2993390- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_005532-T2 ID=KJC3_005532-T2|Name=KJC3_005532-T2|organism=Aspergillus niger KJC3|type=mRNA|length=3383bp|location=Sequence derived from alignment at ch4:2990008..2993390- (Aspergillus niger KJC3)
CCTTAGCCTCCCTGACAGTTTGAACATCATGTCTCGTCGACAATATTATC
CAATCACTGATGACCATGTCGATGATCCCAAGGGCTAAACAGGCACTAAT
GCCCTGCGCTGTCCGATCGGCCCTTTGCTCCTCGGGCTTGCGGTGGCTGG
GCCCGAGGAGGCTGGGAGACATCACCGGCCGTATAACCAACCACCCCAAT
CGTGATACCAGCCCAATTCAACAGCGTCCCTTACCTTTTTGTTTGCTGCA
CTTGCCTCTTATTACCTCGTGGGCAGGTTCAGGGTCTGCATCTGAGGGAA
TGTTCATCGGACACATCCACAATCCGCACTGCAAGTGAGCTGTTCACCGC
ATACATTCCTCGGGTGATTTTCGGCCGCCATGCTCGCTCCGGGCTCTGGG
AATGTGAGTCTCAGAACTGTCAGTTGTAAGTTGACTCTGCATAACCTTGG
CACCCAGCCAAGGAAAAGCATGATGCGTCTTCGAATTCAGGCTGACCGAT
GACTGATCCCCTCACAGCTAATCGACCACAATTAATGCACACCCAGTCTC
AACAGTCCATCGCCGCCTCCGACGACTACTACTCTTTCTCAAGTCCATCC
TCAAGTGCAAGATCCCGAGCCAGTGGCAGTCGACTCACCGTGGCGCGGTA
TGCGACACCGAACTCTCATCCTCCGTCCCGAACACCGTCTCCTAGCATCT
CTCGGACGCATCTAGCCTCGCAGCCGGCTGGTGCACGATCGGAACATTCC
TTAAACGTTCCGAGTGAGAACAGGAATTTTGTTACACCCCCTTCTCAGAC
AATACGTGCAGTCGAAGAGGAAGATCCTGAGCCCAGCCCCATGTCAGATA
CCACGAGTCGCCGGGAACTCAGTGACAGCTATTCTGGGCGGCCGCCTACT
CCTGGGGTGGATGACTCGCCATACATTCATTTTGCCATCAGCCAGCTTAC
GCGTGATGAGGAAGTTGCTGGGCCCAGACGGCGAAGCTCGCTCGCCAGTA
ATGACAGTCCTCTCGAGCCACTGCTTTGGGATGAAGGATTGGGCTGCTTC
ATTCGCTCGCCTGGACAACCGGCAACCCCGCCAGCACGGCAACCGCAACA
ATCATCCGACTCTATCGGGAGGGCGCCCCAAAACTCGGTAGATCCAGAAT
CGTTCGTCGCGGTGGAACCTCCGCATGACAGCCTGCTGTACCCACCGTTG
GACTATGTGCCTATAGTATTACGGTCATGGGCTCTGGCTGCCATAATTAT
CTGTTGCCTGCTCATGATTGCTGGACTGAGCTTCTGCAATGTATGGTCGC
GGCGGCATGACGGGCTTTGGGACTATACGGGACTAGGGGGATCCCACTAC
TTTGTGATGCAATTCCTACCGCAAATCTTGGGCATGGTCATTACTATCTG
GACCTTCGTGATCCAAGCGGCAGTGTATAGAATAATGCCGTTTGCCATCA
TGGCTTCAGAGCGGCCGCTCGGCCACGTCCTTCAGAGCCTGCCTATCCTA
TCACGGAACTTCCTGATACCGGACTTCTCCTACTTTCGGCATGGCGAGGG
CATAGTCGGTTTCTCTTTGTTCACCATGTGGTTGTCAAACCTGATCACAC
TACCACTGCTAAGTTGCCTCTTCCAGGCTAAGTGGTACTTGATCGATGGA
CAAGGGACGTGGCGGTGGGCCTCGGTTTCGGCGGTTGGGTGGACCCTGGT
GGCCATCTATGCGTTGTTGACCATTGGCCTGCTCCTGCTCATGTTTCGTT
TTGTACGCACATGGTCGGGGTTGATGTGGGACCCTGTGAGTCTCGCCGAC
CTGATTTCAATCATCCAGCGATCGAACATCTTGCACGACTTTGAACAATC
GGAGACTCTGCCGAATGTCGGCGAATCGCTCGATCCGCGATTCCTCCGAT
TGGGCTACTGGAAACTATCAAACCGTGCGGATATATTCTATGGAATTGGC
GAGGTGGATGCACCGGTTCGGACGCCGTCATTACACCGAAAGGAGAAGAA
CCTTCAGATGCAGTCACATGGCCTGTCAAGGGTATCATTCGACATTGAGC
AGCATGGTCTCGCAGAGAAGGAAGAGTACTATCAGCATCTATACTCACCC
GCTATCCGCTATCGTTGGATCCCATGGTTTCTTCGCGACGGCTTTGTCGT
TCTATGGACGGTAATCATTTGCGCCTTGTTTATTGCATTCGTGTTGGTCA
GCTTCATCCACGGTGCGATCAAAGACGGATTCCCCCCGCGTTTGCCAACA
CTGCCATCTACTGGTGCATTTTCCTCTTCCAACTTTTGCTATAGCTTCAT
TCCTGCTTTCATTGGGAATGTCCTCTTCCTAGCATGGCAGCCGATCGACG
TCTATTTCCGTGCGTTGCAGCCTTTTGCAGCTCTAGCTTCCCCGACCGGT
GCTCGAGCAGAGCAGAGCCTTTTGTTGTCATACCCGTCCTGCTTTCCCTT
CCAGGTGACGCTAGTGGCGGTTTTGAACAAGCATTACAAAGTGGCCTGGG
TTTCATTCATGAGTACGGTGTCTGCGGCGATTCCTATCCTGGCCGGAGGG
ATGTTCATTGCCTTGTACCATCCGTCTGACGGGACGATCCTGATCTCTGC
TCTGATGCCTGCGTTCTATGCTATTGTGGCCTTCTGTGCACTATACATGG
TGTCTTTCCTGTGCATTTGGCCCCGTCGCTGCCGCCGCCTGCCACATGAC
ATTAGCACTTTGGCTGATCAGATGAGCTTCCTATACCAAAGCCCACTGCT
CGCCGATAAAATCCTGCGCGAGCCTCGGAGCAAGGCGGATCTGGTCACTC
GATTGGTCGTCGCGCCTCCTGGAGATCGGGAGCATTCTATGTACGGCTTT
GGCATCTATGTTGGTCGAGATGGCAAGGAGCATCTAGGAATTGATCGTTT
CGACCGTCCTGGCCGGGCGGATATGTTGATTACTACCGGATATTTACGAT
AGGATGCAGCTTGAGCATCCCAAAAAAAAGTCCTTGTACGATGACTGGGT
GGTTGTCTGCTGCTTGGATTGCATATATGCGGTTTTAGCCGCAGAGCTTG
ATATTTTGCGATGAATTATGCGTTATGAACAGCGATGAAAATTACGACAG
AGCTGTATACCCTTCAACTTTTGCATCAGATGACGCCTATTAATGATAAT
GTGGTATAGCGATGGACTTATGATTTGATGATGTTTCATGATTGATGTTG
TCTCTTTTTGTTCGTTCGGGACTTGTGAACTTTACGATGGAATTTATGTA
CTTGATATCCTCAACAGCTTTGGCGGGCGATGTGCCTGTTTACATGATTG
AAATGACTTTCACATTAACATGACTTTTCACTTCTATATGCTTGTGTCTG
ATTGTGTAGCCTTCAATGTATCACTATGCTAAC back to topCoding sequence (CDS) from alignment at ch4:2990008..2993390- >KJC3_005532-T2 ID=KJC3_005532-T2|Name=KJC3_005532-T2|organism=Aspergillus niger KJC3|type=CDS|length=2418bp|location=Sequence derived from alignment at ch4:2990008..2993390- (Aspergillus niger KJC3)
ATGCACACCCAGTCTCAACAGTCCATCGCCGCCTCCGACGACTACTACTC
TTTCTCAAGTCCATCCTCAAGTGCAAGATCCCGAGCCAGTGGCAGTCGAC
TCACCGTGGCGCGGTATGCGACACCGAACTCTCATCCTCCGTCCCGAACA
CCGTCTCCTAGCATCTCTCGGACGCATCTAGCCTCGCAGCCGGCTGGTGC
ACGATCGGAACATTCCTTAAACGTTCCGAGTGAGAACAGGAATTTTGTTA
CACCCCCTTCTCAGACAATACGTGCAGTCGAAGAGGAAGATCCTGAGCCC
AGCCCCATGTCAGATACCACGAGTCGCCGGGAACTCAGTGACAGCTATTC
TGGGCGGCCGCCTACTCCTGGGGTGGATGACTCGCCATACATTCATTTTG
CCATCAGCCAGCTTACGCGTGATGAGGAAGTTGCTGGGCCCAGACGGCGA
AGCTCGCTCGCCAGTAATGACAGTCCTCTCGAGCCACTGCTTTGGGATGA
AGGATTGGGCTGCTTCATTCGCTCGCCTGGACAACCGGCAACCCCGCCAG
CACGGCAACCGCAACAATCATCCGACTCTATCGGGAGGGCGCCCCAAAAC
TCGGTAGATCCAGAATCGTTCGTCGCGGTGGAACCTCCGCATGACAGCCT
GCTGTACCCACCGTTGGACTATGTGCCTATAGTATTACGGTCATGGGCTC
TGGCTGCCATAATTATCTGTTGCCTGCTCATGATTGCTGGACTGAGCTTC
TGCAATGTATGGTCGCGGCGGCATGACGGGCTTTGGGACTATACGGGACT
AGGGGGATCCCACTACTTTGTGATGCAATTCCTACCGCAAATCTTGGGCA
TGGTCATTACTATCTGGACCTTCGTGATCCAAGCGGCAGTGTATAGAATA
ATGCCGTTTGCCATCATGGCTTCAGAGCGGCCGCTCGGCCACGTCCTTCA
GAGCCTGCCTATCCTATCACGGAACTTCCTGATACCGGACTTCTCCTACT
TTCGGCATGGCGAGGGCATAGTCGGTTTCTCTTTGTTCACCATGTGGTTG
TCAAACCTGATCACACTACCACTGCTAAGTTGCCTCTTCCAGGCTAAGTG
GTACTTGATCGATGGACAAGGGACGTGGCGGTGGGCCTCGGTTTCGGCGG
TTGGGTGGACCCTGGTGGCCATCTATGCGTTGTTGACCATTGGCCTGCTC
CTGCTCATGTTTCGTTTTGTACGCACATGGTCGGGGTTGATGTGGGACCC
TGTGAGTCTCGCCGACCTGATTTCAATCATCCAGCGATCGAACATCTTGC
ACGACTTTGAACAATCGGAGACTCTGCCGAATGTCGGCGAATCGCTCGAT
CCGCGATTCCTCCGATTGGGCTACTGGAAACTATCAAACCGTGCGGATAT
ATTCTATGGAATTGGCGAGGTGGATGCACCGGTTCGGACGCCGTCATTAC
ACCGAAAGGAGAAGAACCTTCAGATGCAGTCACATGGCCTGTCAAGGGTA
TCATTCGACATTGAGCAGCATGGTCTCGCAGAGAAGGAAGAGTACTATCA
GCATCTATACTCACCCGCTATCCGCTATCGTTGGATCCCATGGTTTCTTC
GCGACGGCTTTGTCGTTCTATGGACGGTAATCATTTGCGCCTTGTTTATT
GCATTCGTGTTGGTCAGCTTCATCCACGGTGCGATCAAAGACGGATTCCC
CCCGCGTTTGCCAACACTGCCATCTACTGGTGCATTTTCCTCTTCCAACT
TTTGCTATAGCTTCATTCCTGCTTTCATTGGGAATGTCCTCTTCCTAGCA
TGGCAGCCGATCGACGTCTATTTCCGTGCGTTGCAGCCTTTTGCAGCTCT
AGCTTCCCCGACCGGTGCTCGAGCAGAGCAGAGCCTTTTGTTGTCATACC
CGTCCTGCTTTCCCTTCCAGGTGACGCTAGTGGCGGTTTTGAACAAGCAT
TACAAAGTGGCCTGGGTTTCATTCATGAGTACGGTGTCTGCGGCGATTCC
TATCCTGGCCGGAGGGATGTTCATTGCCTTGTACCATCCGTCTGACGGGA
CGATCCTGATCTCTGCTCTGATGCCTGCGTTCTATGCTATTGTGGCCTTC
TGTGCACTATACATGGTGTCTTTCCTGTGCATTTGGCCCCGTCGCTGCCG
CCGCCTGCCACATGACATTAGCACTTTGGCTGATCAGATGAGCTTCCTAT
ACCAAAGCCCACTGCTCGCCGATAAAATCCTGCGCGAGCCTCGGAGCAAG
GCGGATCTGGTCACTCGATTGGTCGTCGCGCCTCCTGGAGATCGGGAGCA
TTCTATGTACGGCTTTGGCATCTATGTTGGTCGAGATGGCAAGGAGCATC
TAGGAATTGATCGTTTCGACCGTCCTGGCCGGGCGGATATGTTGATTACT
ACCGGATATTTACGATAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_005532-T2.utr3p1 | KJC3_005532-T2.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR021840 |
| DBxref | PFAM:PF11915 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch4 | supercontig | ch4:2990008..2993390 - |
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