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KJC3_005535-T3, KJC3_005535-T3 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_005535-T3
Unique NameKJC3_005535-T3
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch4:3003941..3006621+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_005535-T3 ID=KJC3_005535-T3|Name=KJC3_005535-T3|organism=Aspergillus niger KJC3|type=mRNA|length=2681bp|location=Sequence derived from alignment at ch4:3003941..3006621+ (Aspergillus niger KJC3)
CCCCTCACCAATCACGAGCGGCTGATGCCGGCCGTCTTCCCCTTCGATCA
TCTCTCAGCCTTTCGCAGTCCAGGCCATCCGTTCATTCACCATCCAACTC
AACCCAGTCGTTCTTTCGGTCCTCTCTTTCGGTTCCAATCCCCCCCCCTC
CTCCTCCGGATTCTCCTTCTCGAATGAAGTTTCTCTGTTATTCTTCCCAC
TATTCTAGATAGTTAGTTCCAAGGGCTGCTCGCCAGAGCTGCCTCTTGTT
CGCTCTTGGTCCCTCCGCCAACCTTTCTTATCGCGGCCGCAGCGCCGCTC
CGCTCCCTTAATCGCCATGCTGCTCAAACCCGCCACTCCCCTCACCATCC
TCCTCCTGATCGCATTTGCGCTTCTCCTTATCTCTGTCATTTCCACCCCT
ATCGTCAAAAGCATTGCGCTTGCGAGACATGATAACATTGACTATGGCGT
GTTCGGATACTGCAAAGGCGATGTGTGCACCAGCATTCATGTTGGTTACG
CCGACGGTTCGTTGCCCTCTTGTGCTTTTGTTACCAATCTCATGAGGACC
GCTAAATTCCTGACTTGAATCGCAGCTGACTCTAGTTCAGATGACATAAC
TTCCGAAGACGGTACATTTAGCATTGCACCTGGCACCCGCAGATCGCTCT
CAGCAATTCTGATCGTCCATCCCGTCGCTGCGTTCCTCACACTCGTATGC
CTATGCATGGCCGCAGCGGCTCATTTTCACTCACCGTCGCATTCGCCCCG
CTATTTGCTAGCCTTGTTGATCCTACTGCTTCCTACTCTTCTCGTGTCAC
TCCTCGCGTTCCTGGTCGATATTCTCTTGTTTGTACCGCACATGGCCTGG
GCAGGATGGATTGTATTAGTTGCCACCATTTTACTTGTCACTTGCGGCGT
GGTTACATGTGCAATGCGGCGGACACTCGTGAGCCGCAAGGCAAGGAAGA
AGCGGATCAACGAAAATGCTGAAATGAGCGGGGAGAACTTCTACAACCGC
CAAAACGCAGCGGCGGCAGCAGCAGCAGCAGCGAACCTGGATACAAAGGA
GCCTGTGATAACTGGGTCTTCGCCTTCATCCGAGACGGGCCCTACATTTG
CTACTTTCCGTACGACTACACACGACAGTGATGACGATCGCACGCCACTG
AATTCACGGACTGTTCATCCTGACCCTCCAATGCCCGATAACCAGTACAC
CCGGGCGCGGAGAGATGTGGCAGCCTATAACTCTCCGCCTGATGATGCTG
GTGTTCCTGGTCCGCAAGCTCCACCATCCGATCCTCGTTTGCGCAATCAG
TATTCCGACGGCAGTGTCGGCTCGCGGAGAGGGGCCCCTCCGCCAGGGTT
TGCGCGCGGACGGGGTGGTTATCCACCTCGAGGGGCTTATGGCCGTGGGG
GGCCTTATAGAGGACCACCCCGGGGCCCGCCTCCTCCGGGTGCAAACGGT
GCCCCAATGGGTCCCATGCGAGGTGGACATCCCGGAATGATGGGACGAGG
ATACCGAGGACCCCCTCCGGGTGATTACATGCCTGGGCCCGTTCCTAGGC
CAACTCCGCCGCCTGAAGATGAGTACGGCTATCACCACCCACCGCCCGTC
GCTCGACAGCCGTCCCCTGGGCCAATTGGAATGGCAGTATCTCCCGATCA
TGGTAGCCCAATCGGCCAGGCTATCGAAATGCAACCACAGCCACGACGAA
TGGGCTCTCATGAATCGCATGAAGCGCACCTCGAACCCCAGCCACATGCG
CTGTCAGCAGATGGCTATCCGGAGCCTATCAGTCCTTCAAGCCTCTATAG
TCGGACAGCGTAAGCTGTGTATCCTCTCTAACCTTGTGTTTGAATGCTAA
CGGTCTTTAGATCATATATTCCTCCGCGTGCCGGTTGGGCTCCAGAAGAA
CCGCGGACCGGCCCCTCGCCCTCGCCTGTCCATGCGTATGAAGGGCCACG
ACAACATGCTCGAACTCCTTCAACGGACTATTTTGAAGATGCAGACCCTC
GGTTTGCTACCAACGAGTCGGCGGCAGGCAACCCTCGGTTGCCGGCTGTC
TTGACACCAGGTGCTACTGGTGAGAGGAAACCGATGGAAGATATGGCTGA
AGGACCCAGCTCACCGACTACTAGCGAAGTAAGCCACTTTACATCAATAT
CTGAGCGGCCTATCAATCCCCGCTGGCGGCCACCTCCCGTTCCAGCGCAG
CGGAAGCATGATGTTCTCCTAGAGAACAATCCCGACTTTGACTTGCGGGC
AGGTACTGGGCGGGGAGGAGCTGCTGGTGTTGGTAGTCGTATGCCACCAA
TGTCGATACCCCGAGATGCGGCAAGATACCCCATTTGAACATAATCTTAA
TTTCTTTCGTCTGCACCATGGATGTGCTTGTCACATTCAGTATGCCGGCC
TTGCGTGGAGTTATGGAGTCTGCTATGGAGTCCGCCACTGGACTGTTTCG
TTGTGTTCTTCACCACTTACCCTGTCATGCTTGCGCCGCATGACACTGCA
AATAAGCGCACCCTGTCCGTTGCGTCGGTCCATGTATATGAAAAATGGAA
AGATCCGGGTGTACAATTGAACGGCTCTCTTGCTTTGAGGGGGGCTTGAT
TGTCGTTTGTTATGATTATTATGTTAGTTCGATAGCCATGATGGATTATG
ATATAACCAGCTGCCTACCTTTGTAGAATCG
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Coding sequence (CDS) from alignment at ch4:3003941..3006621+

>KJC3_005535-T3 ID=KJC3_005535-T3|Name=KJC3_005535-T3|organism=Aspergillus niger KJC3|type=CDS|length=2826bp|location=Sequence derived from alignment at ch4:3003941..3006621+ (Aspergillus niger KJC3)
ATGCTGCTCAAACCCGCCACTCCCCTCACCATCCTCCTCCTGATCGCATT
TGCGCTTCTCCTTATCTCTGTCATTTCCACCCCTATCGTCAAAAGCATTG
CGCTTGCGAGACATGATAACATTGACTATGGCGTGTTCGGATACTGCAAA
GGCGATGTGTGCACCAGCATTCATGTTGGTTACGCCGACGATGACATAAC
TTCCGAAGACGGTACATTTAGCATTGCACCTGGCACCCGCAGATCGCTCT
CAGCAATTCTGATCGTCCATCCCGTCGCTGCGTTCCTCACACTCGTATGC
CTATGCATGGCCGCAGCGGCTCATTTTCACTCACCGTCGCATTCGCCCCG
CTATTTGCTAGCCTTGTTGATCCTACTGCTTCCTACTCTTCTCGTGTCAC
TCCTCGCGTTCCTGGTCGATATTCTCTTGTTTGTACCGCACATGGCCTGG
GCAGGATGGATTGTATTAGTTGCCACCATTTTACTTGTCACTTGCGGCGT
GGTTACATGTGCAATGCGGCGGACACTCGTGAGCCGCAAGGCAAGGAAGA
AGCGGATCAACGAAAATGCTGAAATGAGCGGGGAGAACTTCTACAACCGC
CAAAACGCAGCGGCGGCAGCAGCAGCAGCAGCGAACCTGGATACAAAGGA
GCCTGTGATAACTGGGTCTTCGCCTTCATCCGAGACGGGCCCTACATTTG
CTACTTTCCGTACGACTACACACGACAGTGATGACGATCGCACGCCACTG
AATTCACGGACTGTTCATCCTGACCCTCCAATGCCCGATAACCAGTACAC
CCGGGCGCGGAGAGATGTGGCAGCCTATAACTCTCCGCCTGATGATGCTG
GTGTTCCTGGTCCGCAAGCTCCACCATCCGATCCTCGTTTGCGCAATCAG
TATTCCGACGGCAGTGTCGGCTCGCGGAGAGGGGCCCCTCCGCCAGGGTT
TGCGCGCGGACGGGGTGGTTATCCACCTCGAGGGGCTTATGGCCGTGGGG
GGCCTTATAGAGGACCACCCCGGGGCCCGCCTCCTCCGGGTGCAAACGGT
GCCCCAATGGGTCCCATGCGAGGTGGACATCCCGGAATGATGGGACGAGG
ATACCGAGGACCCCCTCCGGGTGATTACATGCCTGGGCCCGTTCCTAGGC
CAACTCCGCCGCCTGAAGATGAGTACGGCTATCACCACCCACCGCCCGTC
GCTCGACAGCCGTCCCCTGGGCCAATTGGAATGGCAGTATCTCCCGATCA
TGGTAGCCCAATCGGCCAGGCTATCGAAATGCAACCACAGCCACGACGAA
TGGGCTCTCATGAATCGCATGAAGCGCACCTCGAACCCCAGCCACATGCG
CTGTCAGCAGATGGCTATCCGGAGCCTATCAGTCCTTCAAGCCTCTATAG
TCGGACAGCGTAAATGCTGCTCAAACCCGCCACTCCCCTCACCATCCTCC
TCCTGATCGCATTTGCGCTTCTCCTTATCTCTGTCATTTCCACCCCTATC
GTCAAAAGCATTGCGCTTGCGAGACATGATAACATTGACTATGGCGTGTT
CGGATACTGCAAAGGCGATGTGTGCACCAGCATTCATGTTGGTTACGCCG
ACGATGACATAACTTCCGAAGACGGTACATTTAGCATTGCACCTGGCACC
CGCAGATCGCTCTCAGCAATTCTGATCGTCCATCCCGTCGCTGCGTTCCT
CACACTCGTATGCCTATGCATGGCCGCAGCGGCTCATTTTCACTCACCGT
CGCATTCGCCCCGCTATTTGCTAGCCTTGTTGATCCTACTGCTTCCTACT
CTTCTCGTGTCACTCCTCGCGTTCCTGGTCGATATTCTCTTGTTTGTACC
GCACATGGCCTGGGCAGGATGGATTGTATTAGTTGCCACCATTTTACTTG
TCACTTGCGGCGTGGTTACATGTGCAATGCGGCGGACACTCGTGAGCCGC
AAGGCAAGGAAGAAGCGGATCAACGAAAATGCTGAAATGAGCGGGGAGAA
CTTCTACAACCGCCAAAACGCAGCGGCGGCAGCAGCAGCAGCAGCGAACC
TGGATACAAAGGAGCCTGTGATAACTGGGTCTTCGCCTTCATCCGAGACG
GGCCCTACATTTGCTACTTTCCGTACGACTACACACGACAGTGATGACGA
TCGCACGCCACTGAATTCACGGACTGTTCATCCTGACCCTCCAATGCCCG
ATAACCAGTACACCCGGGCGCGGAGAGATGTGGCAGCCTATAACTCTCCG
CCTGATGATGCTGGTGTTCCTGGTCCGCAAGCTCCACCATCCGATCCTCG
TTTGCGCAATCAGTATTCCGACGGCAGTGTCGGCTCGCGGAGAGGGGCCC
CTCCGCCAGGGTTTGCGCGCGGACGGGGTGGTTATCCACCTCGAGGGGCT
TATGGCCGTGGGGGGCCTTATAGAGGACCACCCCGGGGCCCGCCTCCTCC
GGGTGCAAACGGTGCCCCAATGGGTCCCATGCGAGGTGGACATCCCGGAA
TGATGGGACGAGGATACCGAGGACCCCCTCCGGGTGATTACATGCCTGGG
CCCGTTCCTAGGCCAACTCCGCCGCCTGAAGATGAGTACGGCTATCACCA
CCCACCGCCCGTCGCTCGACAGCCGTCCCCTGGGCCAATTGGAATGGCAG
TATCTCCCGATCATGGTAGCCCAATCGGCCAGGCTATCGAAATGCAACCA
CAGCCACGACGAATGGGCTCTCATGAATCGCATGAAGCGCACCTCGAACC
CCAGCCACATGCGCTGTCAGCAGATGGCTATCCGGAGCCTATCAGTCCTT
CAAGCCTCTATAGTCGGACAGCGTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005886plasma membrane
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_005535KJC3_005535Aspergillus niger KJC3gene


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005535-T3.utr5p1KJC3_005535-T3.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005535-T3.exon1KJC3_005535-T3.exon1Aspergillus niger KJC3exon
KJC3_005535-T3.exon2KJC3_005535-T3.exon2Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005535-T3.cdsKJC3_005535-T3.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005535-T3.utr3p1KJC3_005535-T3.utr3p1Aspergillus niger KJC3three_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005535-T3KJC3_005535-T3-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR009571
DBxrefPFAM:PF06687
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch4supercontigch4:3003941..3006621 +
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