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KJC3_005542-T1, KJC3_005542-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_005542-T1
Unique NameKJC3_005542-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch4:3019139..3020652+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_005542-T1 ID=KJC3_005542-T1|Name=KJC3_005542-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1514bp|location=Sequence derived from alignment at ch4:3019139..3020652+ (Aspergillus niger KJC3)
CAACGGCGAGCGAGAAATTTCGCTCAAAAGAGGGGTAATAGCAGTTGGGA
CATATATAGGGGTCGCCTGAGCAGTCAATCTTGATGGTGTATGTCACCGT
TCGATTCAACGAAAGCTCCGTCCTCTGCCAACTTCACATGTTAAACACAA
TGTCATCTCATCGGAAGGATAACATCGGCGAACTCATCGAATTCGCTCGC
TCTCATTCCCCCTTCTACCAGCGCGTTCTTGAACATGTTCCGGCAGGCGC
CAAAAGTGTTACTGACCTTCCTCTCATCGACCCCGACGAATACTGGAGAG
CGAACGCGTCCAATCCCAATGGAGTGATGACTCGGCCCCTCATTGATGGC
ACAGTCATGCGCAGTGGTGGTTCCACTGGCACTCCCAAGCAAGTTGTCAT
GACCAAACAAGAGCTGTCAACCCATGGCAAAGTCACCGCCAATGCTATGG
CTCATGGCTGTGGCTTCCTCCCTGGCGACCGCGTGGCAAACATGTCCTTC
CACGGCTCCCTATATGGGAGTTTCATGCTCTTGAATACAGCACTCCTCGA
ACTTCCTATTCCAATTGTCCACTTGCCTATTAGCGGAAACGAATCAATTG
ACATGATGGCTCATTACATGAAGACCTTTGAAGCTACTGTTCTCATTGCC
AACGTTTCAACCACACGTCGACTGGCGGAATACTTCACTTCTATTAACGA
GAGTCTTCCCAGTCTTCGGCTGATTTTGTACACGGGCGAATGCTTTACCA
AGGAGCTCCGTCCGGTTTACCGTGCAGCCTTCCCGAACGCCACCATTTAC
GTCCGCGAATACGGTGGTATCGATTTTGGACACGTGGGCATTCCAGCGCA
GCCATTCAAGCACGAAGATGATGACATCAAACCAGTCTACAAAGTCTTGG
CGCCCTTGGTCATCTTTGAAATCTTGGATGAGAATGGCGATCCAATTACT
ACACCCGGAGTTAGGGGGAACGTGGTGATCACTAGCCTGTTGAAGAGGCA
GCAACCTTTGCTTCGCTACCCTGTTGGTGACATTGCTTCTTGGGTTGATT
ACGATGCGGAAACCTTCTACGTCCATGGCCGAGATGCTGTCAGCATAAAA
ATCGCTACCACACATCTACCTGTCGCGTATCTTAGAGAATTGATCGTGAG
GGTCCTTGGCCAAGGAAAGGCATCAGGAAGCCAGTTCGTTGTCCGGCTTC
TGAAGGAGACACACGAACAGGCGCTTGTCTTGAGGATCGTCGCGCCAGAG
CCAGAGAACACATCCGACCTAGTGACTGCTTTTGAAGAGATATTATGTGA
GGAGAGCCCTACCTGGAAGAAGAACAGGAAAGTTAAAAACATCGCCCCGC
TGCAGATTGAGTGGATCGAGGGCAAGGATTTGATTACGAATGCCGGCAGC
GGGAAGTTACGCGACATTGTTGATGAGCGGTTTTCGAATGGGGTATGAAA
CGTCTACGTACAATTGTCATACTCTGCCAAGAGTGAGGGGGTTAGACCGC
AGCATGACCTAGCG
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Coding sequence (CDS) from alignment at ch4:3019139..3020652+

>KJC3_005542-T1 ID=KJC3_005542-T1|Name=KJC3_005542-T1|organism=Aspergillus niger KJC3|type=CDS|length=1365bp|location=Sequence derived from alignment at ch4:3019139..3020652+ (Aspergillus niger KJC3)
ATGGTGTATGTCACCGTTCGATTCAACGAAAGCTCCGTCCTCTGCCAACT
TCACATGTTAAACACAATGTCATCTCATCGGAAGGATAACATCGGCGAAC
TCATCGAATTCGCTCGCTCTCATTCCCCCTTCTACCAGCGCGTTCTTGAA
CATGTTCCGGCAGGCGCCAAAAGTGTTACTGACCTTCCTCTCATCGACCC
CGACGAATACTGGAGAGCGAACGCGTCCAATCCCAATGGAGTGATGACTC
GGCCCCTCATTGATGGCACAGTCATGCGCAGTGGTGGTTCCACTGGCACT
CCCAAGCAAGTTGTCATGACCAAACAAGAGCTGTCAACCCATGGCAAAGT
CACCGCCAATGCTATGGCTCATGGCTGTGGCTTCCTCCCTGGCGACCGCG
TGGCAAACATGTCCTTCCACGGCTCCCTATATGGGAGTTTCATGCTCTTG
AATACAGCACTCCTCGAACTTCCTATTCCAATTGTCCACTTGCCTATTAG
CGGAAACGAATCAATTGACATGATGGCTCATTACATGAAGACCTTTGAAG
CTACTGTTCTCATTGCCAACGTTTCAACCACACGTCGACTGGCGGAATAC
TTCACTTCTATTAACGAGAGTCTTCCCAGTCTTCGGCTGATTTTGTACAC
GGGCGAATGCTTTACCAAGGAGCTCCGTCCGGTTTACCGTGCAGCCTTCC
CGAACGCCACCATTTACGTCCGCGAATACGGTGGTATCGATTTTGGACAC
GTGGGCATTCCAGCGCAGCCATTCAAGCACGAAGATGATGACATCAAACC
AGTCTACAAAGTCTTGGCGCCCTTGGTCATCTTTGAAATCTTGGATGAGA
ATGGCGATCCAATTACTACACCCGGAGTTAGGGGGAACGTGGTGATCACT
AGCCTGTTGAAGAGGCAGCAACCTTTGCTTCGCTACCCTGTTGGTGACAT
TGCTTCTTGGGTTGATTACGATGCGGAAACCTTCTACGTCCATGGCCGAG
ATGCTGTCAGCATAAAAATCGCTACCACACATCTACCTGTCGCGTATCTT
AGAGAATTGATCGTGAGGGTCCTTGGCCAAGGAAAGGCATCAGGAAGCCA
GTTCGTTGTCCGGCTTCTGAAGGAGACACACGAACAGGCGCTTGTCTTGA
GGATCGTCGCGCCAGAGCCAGAGAACACATCCGACCTAGTGACTGCTTTT
GAAGAGATATTATGTGAGGAGAGCCCTACCTGGAAGAAGAACAGGAAAGT
TAAAAACATCGCCCCGCTGCAGATTGAGTGGATCGAGGGCAAGGATTTGA
TTACGAATGCCGGCAGCGGGAAGTTACGCGACATTGTTGATGAGCGGTTT
TCGAATGGGGTATGA
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_005542KJC3_005542Aspergillus niger KJC3gene


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005542-T1.utr5p1KJC3_005542-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005542-T1.exon1KJC3_005542-T1.exon1Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005542-T1.cdsKJC3_005542-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005542-T1.utr3p1KJC3_005542-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005542-T1KJC3_005542-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR020845
DBxrefInterPro:IPR042099
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch4supercontigch4:3019139..3020652 +
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