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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:3071928..3073055+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_005560-T1 ID=KJC3_005560-T1|Name=KJC3_005560-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1128bp|location=Sequence derived from alignment at ch4:3071928..3073055+ (Aspergillus niger KJC3)
ATGAGTGCGACTCCTCAGCAGACAACTAATTCTCTGCGAGAAGAATTCGA
AGCATCCTCCCACAGCAAGAATTACCAGCCCCTCTGGACCGTCTTCGGTC
AAATGGTGCCACCGAAGCCCAATCCCCGCGCCGTGCCAGCTATCTGGCGA
TACGATCAGCTTCGCCCGGATCTGATGAAATCCGGAACCATCATTACTGC
GGAGGAGGCCGAGAGACGAGTGCTGATGCTGGTGAACCCTAACATGGGTA
TGATGATACCTTCCTCTCCCCTCCCATTATGACCCCTTCAGAGGGCTAAG
GTATGATTGAATATACTGACTGATCTACGCAAACAAAGATGCCCCTCACA
CAACAGACACCATCTACGGAGGCCTGCAGCTTGTTCTTCCCGGAGAAACA
GCCCCCGCGCATAGACACGTTGCATTTGCGCTTCGTTTCATTATTGAGGG
CAATGACGGGTTCACGGCGATTGAAGGGCAGAAGATCCGGATGGAGACAG
GGGATGTGATCCTGACTCCTTCGTGGTGCTGGCATGATCACGGTAATGAG
GGCAAGAATCCCATGATCTGGCTTGATGGCTTGGATTTGCCGCTATTTCG
ACGGTTCCCGGTGAATTTCGCAGAGGAGTATACAGAGAGTCGGTACCCTG
CGTTGTGAGTTACCTGTTCCGGAGGAACTAGAGCGAAAATAGGTCTTTTC
TAACCGAAACAAATTTATTTATTAGGGACACCCAAGACAGCCCCATACGC
TTCCCCTGGCGGGACGTGCAGGCTAAGTTGGACGGCGCAAATCTACCATA
CGCAGTTTATCACTATAAGAGTAAGGGGAAGAGTTATCTTTCTGATACTA
TCAGTGCTCAAGCGGAGCGGTTGGGTCCGGGTTACACCACTGTTCCTCGG
CGGGAGACTTGCTCGTTTCTATATCATGTTAAATGCGGTAAGGGCTATTC
TAAGCTTGTAACGGCAGAGGGAGCGGCGCTTGAGATAGAGTGGAAAGAGA
AGGATACGTTTGCCGTGCCTGCATGGTGTCGTGTTCAGCATGTATGTTTG
TCAGGTGAGCCTGCTTATCTTTTTGCGATTAACGACCGACCCATGCTGGA
GTCGTTGGGGTTTATCAGACAGGCTTAA back to topCoding sequence (CDS) from alignment at ch4:3071928..3073055+ >KJC3_005560-T1 ID=KJC3_005560-T1|Name=KJC3_005560-T1|organism=Aspergillus niger KJC3|type=CDS|length=2898bp|location=Sequence derived from alignment at ch4:3071928..3073055+ (Aspergillus niger KJC3)
ATGAGTGCGACTCCTCAGCAGACAACTAATTCTCTGCGAGAAGAATTCGA
AGCATCCTCCCACAGCAAGAATTACCAGCCCCTCTGGACCGTCTTCGGTC
AAATGGTGCCACCGAAGCCCAATCCCCGCGCCGTGCCAGCTATCTGGCGA
TACGATCAGCTTCGCCCGGATCTGATGAAATCCGGAACCATCATTACTGC
GGAGGAGGCCGAGAGACGAGTGCTGATGCTGGTGAACCCTAACATGGATG
CCCCTCACACAACAGACACCATCTACGGAGGCCTGCAGCTTGTTCTTCCC
GGAGAAACAGCCCCCGCGCATAGACACGTTGCATTTGCGCTTCGTTTCAT
TATTGAGGGCAATGACGGGTTCACGGCGATTGAAGGGCAGAAGATCCGGA
TGGAGACAGGGGATGTGATCCTGACTCCTTCGTGGTGCTGGCATGATCAC
GGTAATGAGGGCAAGAATCCCATGATCTGGCTTGATGGCTTGGATTTGCC
GCTATTTCGACGGTTCCCGGTGAATTTCGCAGAGGAGTATACAGAGAGTC
GGTACCCTGCGTTGGACACCCAAGACAGCCCCATACGCTTCCCCTGGCGG
GACGTGCAGGCTAAGTTGGACGGCGCAAATCTACCATACGCAGTTTATCA
CTATAAGAGTAAGGGGAAGAGTTATCTTTCTGATACTATCAGTGCTCAAG
CGGAGCGGTTGGGTCCGGGTTACACCACTGTTCCTCGGCGGGAGACTTGC
TCGTTTCTATATCATGTTAAATGCGGTAAGGGCTATTCTAAGCTTGTAAC
GGCAGAGGGAGCGGCGCTTGAGATAGAGTGGAAAGAGAAGGATACGTTTG
CCGTGCCTGCATGGTGTCGTGTTCAGCATGTATGTTTGTCAGGTGAGCCT
GCTTATCTTTTTGCGATTAACGACCGACCCATGCTGGAGTCGTTGGGGTT
TATCAGACAGGCTTAAATGAGTGCGACTCCTCAGCAGACAACTAATTCTC
TGCGAGAAGAATTCGAAGCATCCTCCCACAGCAAGAATTACCAGCCCCTC
TGGACCGTCTTCGGTCAAATGGTGCCACCGAAGCCCAATCCCCGCGCCGT
GCCAGCTATCTGGCGATACGATCAGCTTCGCCCGGATCTGATGAAATCCG
GAACCATCATTACTGCGGAGGAGGCCGAGAGACGAGTGCTGATGCTGGTG
AACCCTAACATGGATGCCCCTCACACAACAGACACCATCTACGGAGGCCT
GCAGCTTGTTCTTCCCGGAGAAACAGCCCCCGCGCATAGACACGTTGCAT
TTGCGCTTCGTTTCATTATTGAGGGCAATGACGGGTTCACGGCGATTGAA
GGGCAGAAGATCCGGATGGAGACAGGGGATGTGATCCTGACTCCTTCGTG
GTGCTGGCATGATCACGGTAATGAGGGCAAGAATCCCATGATCTGGCTTG
ATGGCTTGGATTTGCCGCTATTTCGACGGTTCCCGGTGAATTTCGCAGAG
GAGTATACAGAGAGTCGGTACCCTGCGTTGGACACCCAAGACAGCCCCAT
ACGCTTCCCCTGGCGGGACGTGCAGGCTAAGTTGGACGGCGCAAATCTAC
CATACGCAGTTTATCACTATAAGAGTAAGGGGAAGAGTTATCTTTCTGAT
ACTATCAGTGCTCAAGCGGAGCGGTTGGGTCCGGGTTACACCACTGTTCC
TCGGCGGGAGACTTGCTCGTTTCTATATCATGTTAAATGCGGTAAGGGCT
ATTCTAAGCTTGTAACGGCAGAGGGAGCGGCGCTTGAGATAGAGTGGAAA
GAGAAGGATACGTTTGCCGTGCCTGCATGGTGTCGTGTTCAGCATGTATG
TTTGTCAGGTGAGCCTGCTTATCTTTTTGCGATTAACGACCGACCCATGC
TGGAGTCGTTGGGGTTTATCAGACAGGCTTAAATGAGTGCGACTCCTCAG
CAGACAACTAATTCTCTGCGAGAAGAATTCGAAGCATCCTCCCACAGCAA
GAATTACCAGCCCCTCTGGACCGTCTTCGGTCAAATGGTGCCACCGAAGC
CCAATCCCCGCGCCGTGCCAGCTATCTGGCGATACGATCAGCTTCGCCCG
GATCTGATGAAATCCGGAACCATCATTACTGCGGAGGAGGCCGAGAGACG
AGTGCTGATGCTGGTGAACCCTAACATGGATGCCCCTCACACAACAGACA
CCATCTACGGAGGCCTGCAGCTTGTTCTTCCCGGAGAAACAGCCCCCGCG
CATAGACACGTTGCATTTGCGCTTCGTTTCATTATTGAGGGCAATGACGG
GTTCACGGCGATTGAAGGGCAGAAGATCCGGATGGAGACAGGGGATGTGA
TCCTGACTCCTTCGTGGTGCTGGCATGATCACGGTAATGAGGGCAAGAAT
CCCATGATCTGGCTTGATGGCTTGGATTTGCCGCTATTTCGACGGTTCCC
GGTGAATTTCGCAGAGGAGTATACAGAGAGTCGGTACCCTGCGTTGGACA
CCCAAGACAGCCCCATACGCTTCCCCTGGCGGGACGTGCAGGCTAAGTTG
GACGGCGCAAATCTACCATACGCAGTTTATCACTATAAGAGTAAGGGGAA
GAGTTATCTTTCTGATACTATCAGTGCTCAAGCGGAGCGGTTGGGTCCGG
GTTACACCACTGTTCCTCGGCGGGAGACTTGCTCGTTTCTATATCATGTT
AAATGCGGTAAGGGCTATTCTAAGCTTGTAACGGCAGAGGGAGCGGCGCT
TGAGATAGAGTGGAAAGAGAAGGATACGTTTGCCGTGCCTGCATGGTGTC
GTGTTCAGCATGTATGTTTGTCAGGTGAGCCTGCTTATCTTTTTGCGATT
AACGACCGACCCATGCTGGAGTCGTTGGGGTTTATCAGACAGGCTTAA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR011051 |
| DBxref | InterPro:IPR013096 |
| DBxref | InterPro:IPR014710 |
| DBxref | PFAM:PF07883 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch4 | supercontig | ch4:3071928..3073055 + |
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