You are here

Home

KJC3_005561-T1, KJC3_005561-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_005561-T1
Unique NameKJC3_005561-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch4:3073920..3074989+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_005561-T1 ID=KJC3_005561-T1|Name=KJC3_005561-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1070bp|location=Sequence derived from alignment at ch4:3073920..3074989+ (Aspergillus niger KJC3)
ATGTCCTGGTCCCGCCTCATCCGTTTTATTGACACCACCGGAGAAGTCTG
CTTCGGAGAACCAGCAATCAGCGACATCACGAAACTAACAGAAGAATGTC
TCGCCGGAACCCTTTTCGCTCAGGAGTATGTGGGAGACAGTCCTCTCTCT
GTGACCCCAGGCTCTCGTCGCTTGCAAGTTAAAGAACTTCTGGGCATTCT
TCGACCAGAGGATGTTCCTATTATCCGTTGCGTGGGGTTGAACTATATGG
CTCATAGTAAGTGCAAGACTCAGTTGGTACCAGCAGAGTAGGGCTACCTT
TCGATTCCAGTCAAAGAGGGTGGCCGCACGCCTCCACCTCATCCTTCGCT
CTTCATTAAGCCAAACACATCTATTGCTTCGTACAATGAGGATATCCCTA
TTCCCCGAATTGCTCAGGACTCGGTAGACTATGAGGGGGAGCTGGTACGT
TCACCGACTAAATCCTTTATTCGATCTCGCATGTCATTGCAGTGAACGAA
AGAAACATCTAACAGTGATTATTTCCTCAAAAAGACTATCGTAATCGGCA
AAACGGGCAAAAACATACCCAAAGAAAATGCTCTCGAGTACATAGCCGGC
TACGTCGCCGCCAATGATGTATCCTGTCGCAGCTGGCAAAAGGATCCTCT
GAAGGCCGGGGGCGTGCCCCAGTGGTGCTTCAGTAAGGGATTTGATAAAT
TCGCTCCTGTTGGTTCGGTTTTGGTTTCTCCTAAGGTATACACATAATTT
GCCTTTATTCAGATCCTCTAAGTGTCAGCTCTAACGGCAGATAGGTCGTC
GGCGCAGCCGATAACCTGCGTCTTCAAACGCTGGTCAATGGCGAGGTCCG
CCAGGATACAAATACCAATGATCTACTTTTCAATGTGCCTCATCTTATTA
GCTTTCTTAGTCAGGGGACTACGTTGAAAAAGGGGACTGTTATTATGACG
GGGACGCCGTCGGGGGTGGCAATGGGGATGACTCCGCCGAAGTATCTTAA
GGATGGTGATGTTGTTGAGGTGGTGGTTGAGGGGCTGGGTGCGACGAGGA
ACGTTATGGTTTTTGAGTAG
back to top

Coding sequence (CDS) from alignment at ch4:3073920..3074989+

>KJC3_005561-T1 ID=KJC3_005561-T1|Name=KJC3_005561-T1|organism=Aspergillus niger KJC3|type=CDS|length=3468bp|location=Sequence derived from alignment at ch4:3073920..3074989+ (Aspergillus niger KJC3)
ATGTCCTGGTCCCGCCTCATCCGTTTTATTGACACCACCGGAGAAGTCTG
CTTCGGAGAACCAGCAATCAGCGACATCACGAAACTAACAGAAGAATGTC
TCGCCGGAACCCTTTTCGCTCAGGAGTATGTGGGAGACAGTCCTCTCTCT
GTGACCCCAGGCTCTCGTCGCTTGCAAGTTAAAGAACTTCTGGGCATTCT
TCGACCAGAGGATGTTCCTATTATCCGTTGCGTGGGGTTGAACTATATGG
CTCATATCAAAGAGGGTGGCCGCACGCCTCCACCTCATCCTTCGCTCTTC
ATTAAGCCAAACACATCTATTGCTTCGTACAATGAGGATATCCCTATTCC
CCGAATTGCTCAGGACTCGGTAGACTATGAGGGGGAGCTGACTATCGTAA
TCGGCAAAACGGGCAAAAACATACCCAAAGAAAATGCTCTCGAGTACATA
GCCGGCTACGTCGCCGCCAATGATGTATCCTGTCGCAGCTGGCAAAAGGA
TCCTCTGAAGGCCGGGGGCGTGCCCCAGTGGTGCTTCAGTAAGGGATTTG
ATAAATTCGCTCCTGTTGGTTCGGTTTTGGTTTCTCCTAAGGTCGTCGGC
GCAGCCGATAACCTGCGTCTTCAAACGCTGGTCAATGGCGAGGTCCGCCA
GGATACAAATACCAATGATCTACTTTTCAATGTGCCTCATCTTATTAGCT
TTCTTAGTCAGGGGACTACGTTGAAAAAGGGGACTGTTATTATGACGGGG
ACGCCGTCGGGGGTGGCAATGGGGATGACTCCGCCGAAGTATCTTAAGGA
TGGTGATGTTGTTGAGGTGGTGGTTGAGGGGCTGGGTGCGACGAGGAACG
TTATGGTTTTTGAGTAGATGTCCTGGTCCCGCCTCATCCGTTTTATTGAC
ACCACCGGAGAAGTCTGCTTCGGAGAACCAGCAATCAGCGACATCACGAA
ACTAACAGAAGAATGTCTCGCCGGAACCCTTTTCGCTCAGGAGTATGTGG
GAGACAGTCCTCTCTCTGTGACCCCAGGCTCTCGTCGCTTGCAAGTTAAA
GAACTTCTGGGCATTCTTCGACCAGAGGATGTTCCTATTATCCGTTGCGT
GGGGTTGAACTATATGGCTCATATCAAAGAGGGTGGCCGCACGCCTCCAC
CTCATCCTTCGCTCTTCATTAAGCCAAACACATCTATTGCTTCGTACAAT
GAGGATATCCCTATTCCCCGAATTGCTCAGGACTCGGTAGACTATGAGGG
GGAGCTGACTATCGTAATCGGCAAAACGGGCAAAAACATACCCAAAGAAA
ATGCTCTCGAGTACATAGCCGGCTACGTCGCCGCCAATGATGTATCCTGT
CGCAGCTGGCAAAAGGATCCTCTGAAGGCCGGGGGCGTGCCCCAGTGGTG
CTTCAGTAAGGGATTTGATAAATTCGCTCCTGTTGGTTCGGTTTTGGTTT
CTCCTAAGGTCGTCGGCGCAGCCGATAACCTGCGTCTTCAAACGCTGGTC
AATGGCGAGGTCCGCCAGGATACAAATACCAATGATCTACTTTTCAATGT
GCCTCATCTTATTAGCTTTCTTAGTCAGGGGACTACGTTGAAAAAGGGGA
CTGTTATTATGACGGGGACGCCGTCGGGGGTGGCAATGGGGATGACTCCG
CCGAAGTATCTTAAGGATGGTGATGTTGTTGAGGTGGTGGTTGAGGGGCT
GGGTGCGACGAGGAACGTTATGGTTTTTGAGTAGATGTCCTGGTCCCGCC
TCATCCGTTTTATTGACACCACCGGAGAAGTCTGCTTCGGAGAACCAGCA
ATCAGCGACATCACGAAACTAACAGAAGAATGTCTCGCCGGAACCCTTTT
CGCTCAGGAGTATGTGGGAGACAGTCCTCTCTCTGTGACCCCAGGCTCTC
GTCGCTTGCAAGTTAAAGAACTTCTGGGCATTCTTCGACCAGAGGATGTT
CCTATTATCCGTTGCGTGGGGTTGAACTATATGGCTCATATCAAAGAGGG
TGGCCGCACGCCTCCACCTCATCCTTCGCTCTTCATTAAGCCAAACACAT
CTATTGCTTCGTACAATGAGGATATCCCTATTCCCCGAATTGCTCAGGAC
TCGGTAGACTATGAGGGGGAGCTGACTATCGTAATCGGCAAAACGGGCAA
AAACATACCCAAAGAAAATGCTCTCGAGTACATAGCCGGCTACGTCGCCG
CCAATGATGTATCCTGTCGCAGCTGGCAAAAGGATCCTCTGAAGGCCGGG
GGCGTGCCCCAGTGGTGCTTCAGTAAGGGATTTGATAAATTCGCTCCTGT
TGGTTCGGTTTTGGTTTCTCCTAAGGTCGTCGGCGCAGCCGATAACCTGC
GTCTTCAAACGCTGGTCAATGGCGAGGTCCGCCAGGATACAAATACCAAT
GATCTACTTTTCAATGTGCCTCATCTTATTAGCTTTCTTAGTCAGGGGAC
TACGTTGAAAAAGGGGACTGTTATTATGACGGGGACGCCGTCGGGGGTGG
CAATGGGGATGACTCCGCCGAAGTATCTTAAGGATGGTGATGTTGTTGAG
GTGGTGGTTGAGGGGCTGGGTGCGACGAGGAACGTTATGGTTTTTGAGTA
GATGTCCTGGTCCCGCCTCATCCGTTTTATTGACACCACCGGAGAAGTCT
GCTTCGGAGAACCAGCAATCAGCGACATCACGAAACTAACAGAAGAATGT
CTCGCCGGAACCCTTTTCGCTCAGGAGTATGTGGGAGACAGTCCTCTCTC
TGTGACCCCAGGCTCTCGTCGCTTGCAAGTTAAAGAACTTCTGGGCATTC
TTCGACCAGAGGATGTTCCTATTATCCGTTGCGTGGGGTTGAACTATATG
GCTCATATCAAAGAGGGTGGCCGCACGCCTCCACCTCATCCTTCGCTCTT
CATTAAGCCAAACACATCTATTGCTTCGTACAATGAGGATATCCCTATTC
CCCGAATTGCTCAGGACTCGGTAGACTATGAGGGGGAGCTGACTATCGTA
ATCGGCAAAACGGGCAAAAACATACCCAAAGAAAATGCTCTCGAGTACAT
AGCCGGCTACGTCGCCGCCAATGATGTATCCTGTCGCAGCTGGCAAAAGG
ATCCTCTGAAGGCCGGGGGCGTGCCCCAGTGGTGCTTCAGTAAGGGATTT
GATAAATTCGCTCCTGTTGGTTCGGTTTTGGTTTCTCCTAAGGTCGTCGG
CGCAGCCGATAACCTGCGTCTTCAAACGCTGGTCAATGGCGAGGTCCGCC
AGGATACAAATACCAATGATCTACTTTTCAATGTGCCTCATCTTATTAGC
TTTCTTAGTCAGGGGACTACGTTGAAAAAGGGGACTGTTATTATGACGGG
GACGCCGTCGGGGGTGGCAATGGGGATGACTCCGCCGAAGTATCTTAAGG
ATGGTGATGTTGTTGAGGTGGTGGTTGAGGGGCTGGGTGCGACGAGGAAC
GTTATGGTTTTTGAGTAG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_005561KJC3_005561Aspergillus niger KJC3gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005561-T1.exon1KJC3_005561-T1.exon1Aspergillus niger KJC3exon
KJC3_005561-T1.exon2KJC3_005561-T1.exon2Aspergillus niger KJC3exon
KJC3_005561-T1.exon3KJC3_005561-T1.exon3Aspergillus niger KJC3exon
KJC3_005561-T1.exon4KJC3_005561-T1.exon4Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005561-T1.cdsKJC3_005561-T1.cdsAspergillus niger KJC3CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005561-T1KJC3_005561-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR011234
DBxrefInterPro:IPR036663
DBxrefPFAM:PF01557
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch4supercontigch4:3073920..3074989 +
Powered by Drupal