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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:3135976..3136994- Legend: exonfive_prime_UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_005579-T1 ID=KJC3_005579-T1|Name=KJC3_005579-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1019bp|location=Sequence derived from alignment at ch4:3135976..3136994- (Aspergillus niger KJC3)
TACAATCCACTCATACACCCGCTTCCTTCATCTCAAACATATTACTACCT
AGCATCAGCATGTCAACTATTCCTCTCTACACCGGCACTCACATCTCCAT
CGGCCCCCACAAGCTGTACCTGCATCTGCACGGCCCACCCCGCACCACCC
AGCCTCTCACCATCTTCCTCGCCGGCGCCGGCGACGTTTCTTCCAGCTAC
ACCACTGTAATCCGGTTACTGAGCCCATTCGCCCCGTGTCTTGTCTACGA
CCGCACCGGTCTCGGGCGCAGCGATGTCCCAGATTTAGATACCAAGTACA
AGCCCAGCGCGACTCTCGCTGCCAGCGAACTACACACTCTACTTACAAAC
GCAGATCTCCCACCACCGTACATCTTAGTGGGACACTCGTACGGCGCCAT
CATCGCAAGGGAGTATCTCCATCTTTATCCTGCAGATATAGGTGGTATGG
TACTCTTCGAAGGATCAACGGAGCACCAATACAAACTGTTCGAAGATAAT
CCCAACCTGGATAGTGATCTTGCTGCTCTATTAGGGGAGATGAACTTCGC
TACAGTGACGGGATTACGCGAGAACGCTAAGTTGAGTCGTGAGGAGTGGA
GAGAGAGGGCGAGGGATATTGCGCGCGGAATGGGGATGTGGGAGGCTGAG
AGAGGGAACTTGGTGGGGGTTTGTAGGGAGTTGGAAGGGAAGAAGCAGTT
GCAGGGAGAAGGATTGGGGGAGAGACCATTGTCTGTGGTGATGGGACGGG
GATGGGAGGATTATCAGAGGGTCTATGAGATGGGAGTGAAGATGGGGAAT
GGAAGTGAAGAGCAGAGAGAGGCGGTCAGAAGGTTTCTGGGGAGGTGTGA
GGAGGTGGTGGGGGAGTGGCAGAGGGAGCAGTTGAGGTTATCGAGGAGAG
CGAAGTTGGTAAAGGTGGATTGTGGACATCAGGTGCATTTGGTGAGGCCG
GAGGTGGTGGTGGAGGAGGTGAAATGGGTGTTGGAGATGATTAAAGATAG
AAGTAGTAGTGTGTTGTAG back to topCoding sequence (CDS) from alignment at ch4:3135976..3136994- >KJC3_005579-T1 ID=KJC3_005579-T1|Name=KJC3_005579-T1|organism=Aspergillus niger KJC3|type=CDS|length=960bp|location=Sequence derived from alignment at ch4:3135976..3136994- (Aspergillus niger KJC3)
ATGTCAACTATTCCTCTCTACACCGGCACTCACATCTCCATCGGCCCCCA
CAAGCTGTACCTGCATCTGCACGGCCCACCCCGCACCACCCAGCCTCTCA
CCATCTTCCTCGCCGGCGCCGGCGACGTTTCTTCCAGCTACACCACTGTA
ATCCGGTTACTGAGCCCATTCGCCCCGTGTCTTGTCTACGACCGCACCGG
TCTCGGGCGCAGCGATGTCCCAGATTTAGATACCAAGTACAAGCCCAGCG
CGACTCTCGCTGCCAGCGAACTACACACTCTACTTACAAACGCAGATCTC
CCACCACCGTACATCTTAGTGGGACACTCGTACGGCGCCATCATCGCAAG
GGAGTATCTCCATCTTTATCCTGCAGATATAGGTGGTATGGTACTCTTCG
AAGGATCAACGGAGCACCAATACAAACTGTTCGAAGATAATCCCAACCTG
GATAGTGATCTTGCTGCTCTATTAGGGGAGATGAACTTCGCTACAGTGAC
GGGATTACGCGAGAACGCTAAGTTGAGTCGTGAGGAGTGGAGAGAGAGGG
CGAGGGATATTGCGCGCGGAATGGGGATGTGGGAGGCTGAGAGAGGGAAC
TTGGTGGGGGTTTGTAGGGAGTTGGAAGGGAAGAAGCAGTTGCAGGGAGA
AGGATTGGGGGAGAGACCATTGTCTGTGGTGATGGGACGGGGATGGGAGG
ATTATCAGAGGGTCTATGAGATGGGAGTGAAGATGGGGAATGGAAGTGAA
GAGCAGAGAGAGGCGGTCAGAAGGTTTCTGGGGAGGTGTGAGGAGGTGGT
GGGGGAGTGGCAGAGGGAGCAGTTGAGGTTATCGAGGAGAGCGAAGTTGG
TAAAGGTGGATTGTGGACATCAGGTGCATTTGGTGAGGCCGGAGGTGGTG
GTGGAGGAGGTGAAATGGGTGTTGGAGATGATTAAAGATAGAAGTAGTAG
TGTGTTGTAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_005579-T1.utr5p1 | KJC3_005579-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR000073 |
| DBxref | InterPro:IPR029058 |
| DBxref | PFAM:PF12697 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch4 | supercontig | ch4:3135976..3136994 - |
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