You are here

Home

KJC3_005580-T1, KJC3_005580-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_005580-T1
Unique NameKJC3_005580-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch4:3137017..3139289-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_005580-T1 ID=KJC3_005580-T1|Name=KJC3_005580-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2273bp|location=Sequence derived from alignment at ch4:3137017..3139289- (Aspergillus niger KJC3)
AATGAGAAGAATGGAAGTGAAGGTGGAGCAGAGGCCGAGAGATGGAGAGG
AACAAATGCCAGCGCGACTTGCCGGCGATCATCTCTGCAGCTCCGCCGAA
CTTAAAAGATCCCAACTCCTGCACTTCTCTCCTGTACCTGACTAACTATC
GCCCACCCCGCTCGGTTGGTGGAATGCAAACACGATGCACCCTGACTTAA
AGCTATAAATTGCCTGCTCCACATTACGTGCCTGAACTCAACCCGATCAT
TCGGTGCCTTGATTCTGCTGCCTATCATCTACATGCGGCACGCCCCCACC
ACGACTGCCGCTGGTCTCGCGCCAGACGTCAATGAACTGCGACTGCTGCG
ACAGGCCTGCTGATTTCTCTTCGATTTAATTCTCATCATCGACTGCCATC
GTCTCATGCGCAGCCATGGCCGCCCATCTACCTCCGGCTACCGGTGCGGG
GTCCCCGCAGAGTGTGGAATCAATCACTCGCATGGCTCAGGATTATGAGT
ACAACCCGTCTATACCTCTACGCTACTGGCTGCGAACAGCGTCTACTCTC
ATGAGAGAGGTTGGTAGACTTGCTGCTTGGCTATTGTGGAGTGAGCTAAC
TGATGTGGTGGCTTAGGCTCGGATTTACGAACGCGAAAAGCACGAAGAAC
AAGCCTACCTTTTATTGTTTCGCCATGCTCAGTTGGTACTTGTCAATTTG
GCGGAGCATCCAGAGGCCAGAGATGAAAAGAACCGGAAAGCTTTGGTGGA
AGCCGAAAAGGAGGTCAAACGAAACCTGAAGGTCCTCGAAGTTCTGAAAC
CCCGGATCAACAAACGCTACGAGCGCTATACTCAGTTGATGCGTGAACGG
CAAGCTCGCGCACCAGCAGCGGCGAATAACACTCCCACTTCAACCCAGAG
ACCCCCTCAAGATCCCGCCCTCGCAGGGGTCGTGGAACCTCTGGAAGCAG
GAGAGAACAAAGACCTGGCGGTGCAGCTGGCTCGGACGGAGCTTAGCCGA
CGAGCAACTGTCCGAAAGGCTATCCGACAAGCAGGCATAACACCTGAAGA
GGAGCAGACTCGTCGGGCTGCTGGCGTGTGGGGAGACTGGGAGCATGCCC
TGCGCAAAGATGGAACCGAGGACGATGACTTGAGCCGGCGCATACAGAAC
GTGAGAATCCAGATGGACGATCCGCGGGCGGATCACCGTCCACAGGTTGC
CACTAAGCCTATGGTCCGGCCATCTGCCGCAACCTCTTCAACCGGCGCAT
ACAAGTATCCGAGCGTCCCTCGTCAGAAGCCGCTGGAAGTTCCGTCGGCC
GCAAAGGTGGAGCCTGAGAAGAGGATTGTTCTTCCGCCCAAAGCGCCCGC
ACTGCCTCCTAAGGAAACTTCGTATGTACATGAACTGGCTGGCCTTGAAG
GACCTTCACCTCCACCTCGTCCAGACAAGGTCTCGCCCGCAGCGATCCCG
GCTGAGCCTCCTGTGCTTCCTGGAAAGGTTCCAGCAACCGATGGGTCAGC
TGCCAGCCCGAATTTGGACCCGTCCAGCTATACCTTCAAGCCCTCTGCTT
ATCTAGAGAACGGAACGCCTCTGCGGACGTTGTTCCTGCCACCTGATCTA
CGCAAGCACTTCATCTCACTGGTATCCCCGAATACGCAGCGCAATCTAGA
GACGTGCGGCATTTTGTGCGGCACGCTAGTCTCCAACGCCTTGTTCGTTT
CGAGGCTGCTCATCCCTGAACAGACGGCCACGTCGGACACGTGCGAGACG
GTGAACGAGTCTGCGATCTTCGACTACTGCGATTCAGAGGACTTGATGGT
GCTCGGCTGGATCCACACGCACCCGACACAGACGTGCTTTATGAGCTCGC
GCGACCTCCACACACATTGCGGATACCAGGTGATGCTGCCGGAGAGCATT
GCGATTGTGTGCGCGCCCAGCAAGACGCCCGACTGGGGAGTGTTCCGGCT
GACGGATCCTCCGGGGCTGAAGACGGTGCTCAACTGCACGCAGTCGGGAC
TCTTCCATCCCCATGGAGAGGCAAACATTTACACAGATGCGCTGCGCCCG
GGACATGTATTTGAGGCAAAAGGATTGGAGTTCGAGACGGTGGATCTGCG
CCCCAAGGGGTCTCAATTCTGACATTAGATCTTTGTTGCCAATTTACTTT
GAGCGTCAATAGCATATGATTACATGATAAGGAGCTAATGAGGAATGATG
CACTAGTCTATACCTTACTACTTAGTCTGTCAGCTAGACACCCAAGAAAA
TAGCTAACTAACTACCATGTGAC
back to top

Coding sequence (CDS) from alignment at ch4:3137017..3139289-

>KJC3_005580-T1 ID=KJC3_005580-T1|Name=KJC3_005580-T1|organism=Aspergillus niger KJC3|type=CDS|length=3300bp|location=Sequence derived from alignment at ch4:3137017..3139289- (Aspergillus niger KJC3)
GCTCGGATTTACGAACGCGAAAAGCACGAAGAACAAGCCTACCTTTTATT
GTTTCGCCATGCTCAGTTGGTACTTGTCAATTTGGCGGAGCATCCAGAGG
CCAGAGATGAAAAGAACCGGAAAGCTTTGGTGGAAGCCGAAAAGGAGGTC
AAACGAAACCTGAAGGTCCTCGAAGTTCTGAAACCCCGGATCAACAAACG
CTACGAGCGCTATACTCAGTTGATGCGTGAACGGCAAGCTCGCGCACCAG
CAGCGGCGAATAACACTCCCACTTCAACCCAGAGACCCCCTCAAGATCCC
GCCCTCGCAGGGGTCGTGGAACCTCTGGAAGCAGGAGAGAACAAAGACCT
GGCGGTGCAGCTGGCTCGGACGGAGCTTAGCCGACGAGCAACTGTCCGAA
AGGCTATCCGACAAGCAGGCATAACACCTGAAGAGGAGCAGACTCGTCGG
GCTGCTGGCGTGTGGGGAGACTGGGAGCATGCCCTGCGCAAAGATGGAAC
CGAGGACGATGACTTGAGCCGGCGCATACAGAACGTGAGAATCCAGATGG
ACGATCCGCGGGCGGATCACCGTCCACAGGTTGCCACTAAGCCTATGGTC
CGGCCATCTGCCGCAACCTCTTCAACCGGCGCATACAAGTATCCGAGCGT
CCCTCGTCAGAAGCCGCTGGAAGTTCCGTCGGCCGCAAAGGTGGAGCCTG
AGAAGAGGATTGTTCTTCCGCCCAAAGCGCCCGCACTGCCTCCTAAGGAA
ACTTCGTATGTACATGAACTGGCTGGCCTTGAAGGACCTTCACCTCCACC
TCGTCCAGACAAGGTCTCGCCCGCAGCGATCCCGGCTGAGCCTCCTGTGC
TTCCTGGAAAGGTTCCAGCAACCGATGGGTCAGCTGCCAGCCCGAATTTG
GACCCGTCCAGCTATACCTTCAAGCCCTCTGCTTATCTAGAGAACGGAAC
GCCTCTGCGGACGTTGTTCCTGCCACCTGATCTACGCAAGCACTTCATCT
CACTGGTATCCCCGAATACGCAGCGCAATCTAGAGACGTGCGGCATTTTG
TGCGGCACGCTAGTCTCCAACGCCTTGTTCGTTTCGAGGCTGCTCATCCC
TGAACAGACGGCCACGTCGGACACGTGCGAGACGGTGAACGAGTCTGCGA
TCTTCGACTACTGCGATTCAGAGGACTTGATGGTGCTCGGCTGGATCCAC
ACGCACCCGACACAGACGTGCTTTATGAGCTCGCGCGACCTCCACACACA
TTGCGGATACCAGGTGATGCTGCCGGAGAGCATTGCGATTGTGTGCGCGC
CCAGCAAGACGCCCGACTGGGGAGTGTTCCGGCTGACGGATCCTCCGGGG
CTGAAGACGGTGCTCAACTGCACGCAGTCGGGACTCTTCCATCCCCATGG
AGAGGCAAACATTTACACAGATGCGCTGCGCCCGGGACATGTATTTGAGG
CAAAAGGATTGGAGTTCGAGACGGTGGATCTGCGCCCCAAGGGGTCTCAA
TTCTGAATGGCCGCCCATCTACCTCCGGCTACCGGTGCGGGGTCCCCGCA
GAGTGTGGAATCAATCACTCGCATGGCTCAGGATTATGAGTACAACCCGT
CTATACCTCTACGCTACTGGCTGCGAACAGCGTCTACTCTCATGAGAGAG
GCTCGGATTTACGAACGCGAAAAGCACGAAGAACAAGCCTACCTTTTATT
GTTTCGCCATGCTCAGTTGGTACTTGTCAATTTGGCGGAGCATCCAGAGG
CCAGAGATGAAAAGAACCGGAAAGCTTTGGTGGAAGCCGAAAAGGAGGTC
AAACGAAACCTGAAGGTCCTCGAAGTTCTGAAACCCCGGATCAACAAACG
CTACGAGCGCTATACTCAGTTGATGCGTGAACGGCAAGCTCGCGCACCAG
CAGCGGCGAATAACACTCCCACTTCAACCCAGAGACCCCCTCAAGATCCC
GCCCTCGCAGGGGTCGTGGAACCTCTGGAAGCAGGAGAGAACAAAGACCT
GGCGGTGCAGCTGGCTCGGACGGAGCTTAGCCGACGAGCAACTGTCCGAA
AGGCTATCCGACAAGCAGGCATAACACCTGAAGAGGAGCAGACTCGTCGG
GCTGCTGGCGTGTGGGGAGACTGGGAGCATGCCCTGCGCAAAGATGGAAC
CGAGGACGATGACTTGAGCCGGCGCATACAGAACGTGAGAATCCAGATGG
ACGATCCGCGGGCGGATCACCGTCCACAGGTTGCCACTAAGCCTATGGTC
CGGCCATCTGCCGCAACCTCTTCAACCGGCGCATACAAGTATCCGAGCGT
CCCTCGTCAGAAGCCGCTGGAAGTTCCGTCGGCCGCAAAGGTGGAGCCTG
AGAAGAGGATTGTTCTTCCGCCCAAAGCGCCCGCACTGCCTCCTAAGGAA
ACTTCGTATGTACATGAACTGGCTGGCCTTGAAGGACCTTCACCTCCACC
TCGTCCAGACAAGGTCTCGCCCGCAGCGATCCCGGCTGAGCCTCCTGTGC
TTCCTGGAAAGGTTCCAGCAACCGATGGGTCAGCTGCCAGCCCGAATTTG
GACCCGTCCAGCTATACCTTCAAGCCCTCTGCTTATCTAGAGAACGGAAC
GCCTCTGCGGACGTTGTTCCTGCCACCTGATCTACGCAAGCACTTCATCT
CACTGGTATCCCCGAATACGCAGCGCAATCTAGAGACGTGCGGCATTTTG
TGCGGCACGCTAGTCTCCAACGCCTTGTTCGTTTCGAGGCTGCTCATCCC
TGAACAGACGGCCACGTCGGACACGTGCGAGACGGTGAACGAGTCTGCGA
TCTTCGACTACTGCGATTCAGAGGACTTGATGGTGCTCGGCTGGATCCAC
ACGCACCCGACACAGACGTGCTTTATGAGCTCGCGCGACCTCCACACACA
TTGCGGATACCAGGTGATGCTGCCGGAGAGCATTGCGATTGTGTGCGCGC
CCAGCAAGACGCCCGACTGGGGAGTGTTCCGGCTGACGGATCCTCCGGGG
CTGAAGACGGTGCTCAACTGCACGCAGTCGGGACTCTTCCATCCCCATGG
AGAGGCAAACATTTACACAGATGCGCTGCGCCCGGGACATGTATTTGAGG
CAAAAGGATTGGAGTTCGAGACGGTGGATCTGCGCCCCAAGGGGTCTCAA
TTCTGAATGGCCGCCCATCTACCTCCGGCTACCGGTGCGGGGTCCCCGCA
GAGTGTGGAATCAATCACTCGCATGGCTCAGGATTATGAGTACAACCCGT
CTATACCTCTACGCTACTGGCTGCGAACAGCGTCTACTCTCATGAGAGAG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_005580KJC3_005580Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005580-T1KJC3_005580-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005580-T1.cdsKJC3_005580-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005580-T1.utr3p1KJC3_005580-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005580-T1.exon2KJC3_005580-T1.exon2Aspergillus niger KJC3exon
KJC3_005580-T1.exon1KJC3_005580-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005580-T1.utr5p1KJC3_005580-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
NoteMEROPS:MER0029722
DBxrefInterPro:IPR037518
DBxrefInterPro:IPR015063
DBxrefInterPro:IPR000555
DBxrefPFAM:PF08969
DBxrefPFAM:PF01398
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch4supercontigch4:3137017..3139289 -
Powered by Drupal