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KJC3_005584-T1, KJC3_005584-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_005584-T1
Unique NameKJC3_005584-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch4:3146646..3148423+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_005584-T1 ID=KJC3_005584-T1|Name=KJC3_005584-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1778bp|location=Sequence derived from alignment at ch4:3146646..3148423+ (Aspergillus niger KJC3)
ATCTACTTTTTCATGTTTTAGGTATTGGGTCTATTTCATAATATGGCCTT
CACGTACTCTTCATTCATTACATGAACATCCGGGGAAGCAGGAAGCTACC
TTGGCTGTTGTCTGGGCAGCTCTCCACACTTGGCTAACTGTCACAATTTC
TCCACCAATGCCAGCCTAACGCGGTGCTGTCTTGGTTGATCTATACGCCG
ATCAGGTCCCGCGCATACTCTACTCGCGGCCTCTTGAGGAAATTTCCCGG
TTAATGGACCTGAGAGATTTGCAAATTTCCGAACGCTTGTCATGTCTAAT
GGCATGGCAATTGGAGACCCTGAACCTCGGGAGCGCAACATTATGTTGTA
ATATAAGTAAGGGTACGTATGCAAGTGTTACTGGTTATTCAGTGAGCTAC
TGGCTATTCACGCATCGTCATGTCTGTCTTCAAGGCATCATTCCTATTTC
TTCTTTCCTCCTCACTAGTCCACGGGGTTCCACACTCCAGCAGAGCATCT
CGGAGCCAACAATGCGTGGTTCCGTCCAAATACCAGGCATCGAATGGGAC
GGCTGATGACTCGGCTGCTGTCTCCCAGGCCTTTGCACAATGCGCGACTG
ACTCGGTTATTATTTTCGAGGAGGGTGTCAACTATAACATCTTTCAGCCG
ATCACCGCCACCAACCTCAGCAATGTGGAAATCCGGATGCACGGCAACCT
GCATCTGCCACAGAATATCACTGCGGTGCAGAATATAGTCAGTGACGGTA
CTTCTACATGGTTTACCCTAGAAGGACCAAAAGTGGACTGGATTGGTCCT
GAAGACGTGAACAATGGTTGGATTGACTCGTACGGACAACCGTGGTGGGA
TGCGAACCCTGCAGGTAGTTCAGGCATCGATAACCGTCCGCATCTCATGA
GCTTCAAGTCTAGCCAAGCCACTATGAAATACTTCAGGTCTAGGAAGCCC
ATCGCCTGGAATGTCAAACTGCATGGACAAGACATTACAGTCAGCCACGC
TATTATCGACGCTACCTCGACAGGTAGCTTCCCATTCAACACTGACGGTT
TCGATGTTGAGGGTACCAATATCCAGATCACCGACAGTATCATGTACAAC
GGCGACGATGCGATTGCAGTAGGCGCGGACTCGCACGACATACTTTTCAC
AAGAAACACCATCGGCTACCAGACTCACGGCATGAGCATTGGATCGCTGG
GAAAGGATCCCACAGACTTCGCCAATATCAGCAACATCCGCTTTGACGAT
GTGACTGTTGTCGATGGGCTCTACGCAGCACGCTTCAAGTCATGGAGCGG
AGGGACCGGACTCGTCAAGAATGTGACCTGGAACAATATTAGAGTCTTCA
ACGTGACGTTCCCGATCTTTGTGACTCAGAGTTATAGCGACCAAGGCGCC
TCCCGGTCTGGAACTGTCAATGCTAGTTCGGCTGTGATGATGGAGGATTT
TACCTGGTCTGACTTTGCTGGCTCGATCAATACGTACCAGCCTGGTGACG
GTTCTTGCGTTTCCGACCCTTGCTGGTACAACGTTGGGCTGCCAAATTTG
AAGCATACGGAGGCCCTCATTATCGAATGCCATACTGCTCAATCTTGTAA
GAACTTTGTGACGGACAACATCCAGCTATACCCGCAGGTTCTGGAACCAG
CGAGTGTGATCTGCATGAACGCAACGGCAGCCCTCAATCCTGATCTTGGA
TTTACATGTAAAAACGGGACCTACAGCCCATTATCTAATTAATGGAAACT
AGTGATAATACAGATACTTGATATCCAG
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Coding sequence (CDS) from alignment at ch4:3146646..3148423+

>KJC3_005584-T1 ID=KJC3_005584-T1|Name=KJC3_005584-T1|organism=Aspergillus niger KJC3|type=CDS|length=1323bp|location=Sequence derived from alignment at ch4:3146646..3148423+ (Aspergillus niger KJC3)
ATGTCTGTCTTCAAGGCATCATTCCTATTTCTTCTTTCCTCCTCACTAGT
CCACGGGGTTCCACACTCCAGCAGAGCATCTCGGAGCCAACAATGCGTGG
TTCCGTCCAAATACCAGGCATCGAATGGGACGGCTGATGACTCGGCTGCT
GTCTCCCAGGCCTTTGCACAATGCGCGACTGACTCGGTTATTATTTTCGA
GGAGGGTGTCAACTATAACATCTTTCAGCCGATCACCGCCACCAACCTCA
GCAATGTGGAAATCCGGATGCACGGCAACCTGCATCTGCCACAGAATATC
ACTGCGGTGCAGAATATAGTCAGTGACGGTACTTCTACATGGTTTACCCT
AGAAGGACCAAAAGTGGACTGGATTGGTCCTGAAGACGTGAACAATGGTT
GGATTGACTCGTACGGACAACCGTGGTGGGATGCGAACCCTGCAGGTAGT
TCAGGCATCGATAACCGTCCGCATCTCATGAGCTTCAAGTCTAGCCAAGC
CACTATGAAATACTTCAGGTCTAGGAAGCCCATCGCCTGGAATGTCAAAC
TGCATGGACAAGACATTACAGTCAGCCACGCTATTATCGACGCTACCTCG
ACAGGTAGCTTCCCATTCAACACTGACGGTTTCGATGTTGAGGGTACCAA
TATCCAGATCACCGACAGTATCATGTACAACGGCGACGATGCGATTGCAG
TAGGCGCGGACTCGCACGACATACTTTTCACAAGAAACACCATCGGCTAC
CAGACTCACGGCATGAGCATTGGATCGCTGGGAAAGGATCCCACAGACTT
CGCCAATATCAGCAACATCCGCTTTGACGATGTGACTGTTGTCGATGGGC
TCTACGCAGCACGCTTCAAGTCATGGAGCGGAGGGACCGGACTCGTCAAG
AATGTGACCTGGAACAATATTAGAGTCTTCAACGTGACGTTCCCGATCTT
TGTGACTCAGAGTTATAGCGACCAAGGCGCCTCCCGGTCTGGAACTGTCA
ATGCTAGTTCGGCTGTGATGATGGAGGATTTTACCTGGTCTGACTTTGCT
GGCTCGATCAATACGTACCAGCCTGGTGACGGTTCTTGCGTTTCCGACCC
TTGCTGGTACAACGTTGGGCTGCCAAATTTGAAGCATACGGAGGCCCTCA
TTATCGAATGCCATACTGCTCAATCTTGTAAGAACTTTGTGACGGACAAC
ATCCAGCTATACCCGCAGGTTCTGGAACCAGCGAGTGTGATCTGCATGAA
CGCAACGGCAGCCCTCAATCCTGATCTTGGATTTACATGTAAAAACGGGA
CCTACAGCCCATTATCTAATTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0004650polygalacturonase activity
Vocabulary: Biological Process
TermDefinition
GO:0005975carbohydrate metabolic process
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_005584KJC3_005584Aspergillus niger KJC3gene


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005584-T1.utr5p1KJC3_005584-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005584-T1.exon1KJC3_005584-T1.exon1Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005584-T1.cdsKJC3_005584-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005584-T1.utr3p1KJC3_005584-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005584-T1KJC3_005584-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
NoteSECRETED:SignalP(1-19)
NoteCAZy:GH28
DBxrefInterPro:IPR011050
DBxrefInterPro:IPR012334
DBxrefInterPro:IPR000743
DBxrefPFAM:PF00295
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch4supercontigch4:3146646..3148423 +
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