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KJC3_005592-T1, KJC3_005592-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_005592-T1
Unique NameKJC3_005592-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch4:3166629..3167616+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_005592-T1 ID=KJC3_005592-T1|Name=KJC3_005592-T1|organism=Aspergillus niger KJC3|type=mRNA|length=988bp|location=Sequence derived from alignment at ch4:3166629..3167616+ (Aspergillus niger KJC3)
ATGAGCATGGCGTCCCAGTCCGACTTCTTCTCGGCTATGACCAACCGGTC
GCTCCGCAACGTCCGATCGGTAGGATGCCCTCCCCTGTCAGCATCGCTCA
GTAAACGGAGTTGCTCGAGCTGATCTTCAATTATGCACCTTGCTGACATC
CTTCGGTCCACTAGGAACTTGAGTTTCTCGCAGACGCATCAGTCATTACT
CCGCAACAGCTCTCATCCATTCTATCGCAACTACCAAGGGACGATGAACG
CAGCAGAGCCCCCGTGCCTCAGCAGCAGCCACCAGTGCAACAACCACCTG
TCGTCGCCCAGCAGCCCCCTGCCCCATACTCTCCTCCTACGAACCAGTTT
GCAAACACCACCTTGAACGAGAAGGCCACTTATCAGCAGCCTCCTCCGCA
GCAGTACTCAACCCCGCCTGTTCCGCCACCTGCTTATCCCCAAGCTCCAC
CGGTACTGTCTATCGCTTCAGCGCTCTATGCCTACACTCCGACGGACCCC
GGAGACTTGGCTCTGCAACCACACGATCGTATTCAAGTCTTGGAACACAT
GAATGCCGACTGTAAGGCTGTCAATACCCCTTGTGTGCAGCCTCCCTTGC
TAACCGCTGTTTATAGGGTGGCGTGGTCGTAATGAGCGCACCAACCTCGA
GGGTATCTTCCCTCGGAGCTATGTGAACGTGCTGAACGAAAAGGCCGTTT
CGTCTCCTCCCCCGACCAACTATGGAAACATGCCTCTGGAAGTCAGCCAG
AGTGGTTCGACGCCCCCTGGTGAAGAGGGCAAGAAGTCCAAGTTCGAGGA
GCAGGGCAAGAAGTTTGGCAAGAAGATGGGCAATGCCGGTACGTTTAAAG
CGATGCGCATTCGATCGCCATATAGATTGATGCGCCGAACGTCATTAAAT
ATACGGTCAATTTTACTGATAATCACGTCTAGCTATCTTCGGTGCCGGTG
CTACGATGGGTTCGAACATTGTCAACAGCATCTTCTAG
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Coding sequence (CDS) from alignment at ch4:3166629..3167616+

>KJC3_005592-T1 ID=KJC3_005592-T1|Name=KJC3_005592-T1|organism=Aspergillus niger KJC3|type=CDS|length=2976bp|location=Sequence derived from alignment at ch4:3166629..3167616+ (Aspergillus niger KJC3)
ATGAGCATGGCGTCCCAGTCCGACTTCTTCTCGGCTATGACCAACCGGTC
GCTCCGCAACGTCCGATCGGAACTTGAGTTTCTCGCAGACGCATCAGTCA
TTACTCCGCAACAGCTCTCATCCATTCTATCGCAACTACCAAGGGACGAT
GAACGCAGCAGAGCCCCCGTGCCTCAGCAGCAGCCACCAGTGCAACAACC
ACCTGTCGTCGCCCAGCAGCCCCCTGCCCCATACTCTCCTCCTACGAACC
AGTTTGCAAACACCACCTTGAACGAGAAGGCCACTTATCAGCAGCCTCCT
CCGCAGCAGTACTCAACCCCGCCTGTTCCGCCACCTGCTTATCCCCAAGC
TCCACCGGTACTGTCTATCGCTTCAGCGCTCTATGCCTACACTCCGACGG
ACCCCGGAGACTTGGCTCTGCAACCACACGATCGTATTCAAGTCTTGGAA
CACATGAATGCCGACTGGTGGCGTGGTCGTAATGAGCGCACCAACCTCGA
GGGTATCTTCCCTCGGAGCTATGTGAACGTGCTGAACGAAAAGGCCGTTT
CGTCTCCTCCCCCGACCAACTATGGAAACATGCCTCTGGAAGTCAGCCAG
AGTGGTTCGACGCCCCCTGGTGAAGAGGGCAAGAAGTCCAAGTTCGAGGA
GCAGGGCAAGAAGTTTGGCAAGAAGATGGGCAATGCCGCTATCTTCGGTG
CCGGTGCTACGATGGGTTCGAACATTGTCAACAGCATCTTCTAGATGAGC
ATGGCGTCCCAGTCCGACTTCTTCTCGGCTATGACCAACCGGTCGCTCCG
CAACGTCCGATCGGAACTTGAGTTTCTCGCAGACGCATCAGTCATTACTC
CGCAACAGCTCTCATCCATTCTATCGCAACTACCAAGGGACGATGAACGC
AGCAGAGCCCCCGTGCCTCAGCAGCAGCCACCAGTGCAACAACCACCTGT
CGTCGCCCAGCAGCCCCCTGCCCCATACTCTCCTCCTACGAACCAGTTTG
CAAACACCACCTTGAACGAGAAGGCCACTTATCAGCAGCCTCCTCCGCAG
CAGTACTCAACCCCGCCTGTTCCGCCACCTGCTTATCCCCAAGCTCCACC
GGTACTGTCTATCGCTTCAGCGCTCTATGCCTACACTCCGACGGACCCCG
GAGACTTGGCTCTGCAACCACACGATCGTATTCAAGTCTTGGAACACATG
AATGCCGACTGGTGGCGTGGTCGTAATGAGCGCACCAACCTCGAGGGTAT
CTTCCCTCGGAGCTATGTGAACGTGCTGAACGAAAAGGCCGTTTCGTCTC
CTCCCCCGACCAACTATGGAAACATGCCTCTGGAAGTCAGCCAGAGTGGT
TCGACGCCCCCTGGTGAAGAGGGCAAGAAGTCCAAGTTCGAGGAGCAGGG
CAAGAAGTTTGGCAAGAAGATGGGCAATGCCGCTATCTTCGGTGCCGGTG
CTACGATGGGTTCGAACATTGTCAACAGCATCTTCTAGATGAGCATGGCG
TCCCAGTCCGACTTCTTCTCGGCTATGACCAACCGGTCGCTCCGCAACGT
CCGATCGGAACTTGAGTTTCTCGCAGACGCATCAGTCATTACTCCGCAAC
AGCTCTCATCCATTCTATCGCAACTACCAAGGGACGATGAACGCAGCAGA
GCCCCCGTGCCTCAGCAGCAGCCACCAGTGCAACAACCACCTGTCGTCGC
CCAGCAGCCCCCTGCCCCATACTCTCCTCCTACGAACCAGTTTGCAAACA
CCACCTTGAACGAGAAGGCCACTTATCAGCAGCCTCCTCCGCAGCAGTAC
TCAACCCCGCCTGTTCCGCCACCTGCTTATCCCCAAGCTCCACCGGTACT
GTCTATCGCTTCAGCGCTCTATGCCTACACTCCGACGGACCCCGGAGACT
TGGCTCTGCAACCACACGATCGTATTCAAGTCTTGGAACACATGAATGCC
GACTGGTGGCGTGGTCGTAATGAGCGCACCAACCTCGAGGGTATCTTCCC
TCGGAGCTATGTGAACGTGCTGAACGAAAAGGCCGTTTCGTCTCCTCCCC
CGACCAACTATGGAAACATGCCTCTGGAAGTCAGCCAGAGTGGTTCGACG
CCCCCTGGTGAAGAGGGCAAGAAGTCCAAGTTCGAGGAGCAGGGCAAGAA
GTTTGGCAAGAAGATGGGCAATGCCGCTATCTTCGGTGCCGGTGCTACGA
TGGGTTCGAACATTGTCAACAGCATCTTCTAGATGAGCATGGCGTCCCAG
TCCGACTTCTTCTCGGCTATGACCAACCGGTCGCTCCGCAACGTCCGATC
GGAACTTGAGTTTCTCGCAGACGCATCAGTCATTACTCCGCAACAGCTCT
CATCCATTCTATCGCAACTACCAAGGGACGATGAACGCAGCAGAGCCCCC
GTGCCTCAGCAGCAGCCACCAGTGCAACAACCACCTGTCGTCGCCCAGCA
GCCCCCTGCCCCATACTCTCCTCCTACGAACCAGTTTGCAAACACCACCT
TGAACGAGAAGGCCACTTATCAGCAGCCTCCTCCGCAGCAGTACTCAACC
CCGCCTGTTCCGCCACCTGCTTATCCCCAAGCTCCACCGGTACTGTCTAT
CGCTTCAGCGCTCTATGCCTACACTCCGACGGACCCCGGAGACTTGGCTC
TGCAACCACACGATCGTATTCAAGTCTTGGAACACATGAATGCCGACTGG
TGGCGTGGTCGTAATGAGCGCACCAACCTCGAGGGTATCTTCCCTCGGAG
CTATGTGAACGTGCTGAACGAAAAGGCCGTTTCGTCTCCTCCCCCGACCA
ACTATGGAAACATGCCTCTGGAAGTCAGCCAGAGTGGTTCGACGCCCCCT
GGTGAAGAGGGCAAGAAGTCCAAGTTCGAGGAGCAGGGCAAGAAGTTTGG
CAAGAAGATGGGCAATGCCGCTATCTTCGGTGCCGGTGCTACGATGGGTT
CGAACATTGTCAACAGCATCTTCTAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_005592KJC3_005592Aspergillus niger KJC3gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005592-T1.exon1KJC3_005592-T1.exon1Aspergillus niger KJC3exon
KJC3_005592-T1.exon2KJC3_005592-T1.exon2Aspergillus niger KJC3exon
KJC3_005592-T1.exon3KJC3_005592-T1.exon3Aspergillus niger KJC3exon
KJC3_005592-T1.exon4KJC3_005592-T1.exon4Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005592-T1.cdsKJC3_005592-T1.cdsAspergillus niger KJC3CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005592-T1KJC3_005592-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR036028
DBxrefInterPro:IPR001452
DBxrefPFAM:PF14604
DBxrefPFAM:PF07653
DBxrefPFAM:PF00018
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch4supercontigch4:3166629..3167616 +
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