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KJC3_005595-T1, KJC3_005595-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_005595-T1
Unique NameKJC3_005595-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch4:3174591..3176382-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_005595-T1 ID=KJC3_005595-T1|Name=KJC3_005595-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1792bp|location=Sequence derived from alignment at ch4:3174591..3176382- (Aspergillus niger KJC3)
AGATTCAACCAGCTCAAACCACAATCCCTAGAGCAATTTCCTTCATCTCT
CGCGAACGCAACAATCAAGCTACCGGAATATATTGTCCTGGTGGGAAGTT
GAGAAACGCTCATTCTCTCAGATAATCAAAAGGGCCAGCCCAAATATGGC
GGAGACTGTACGTCACACCCCCGTTTTCCCTTTACCGATCGGTTTCCCTC
CCACATTTTCTTCATCACATTTCGCCGTGGGACCATCGACTCCCTCCGCT
TTTGCTTTCTTGAAGCACCACCTCAACCCCCGTGTTCTTTTCCCTCTATA
CCCATTACCTGTTGTGCAACGCTCGGACGCGATTTTTGCGGATCGAGCTT
CACACTGGTCGACTGTCTTTTAGTGTGTCCCAGCGGTTTTTTTGGGTTTT
TAATTTCGCCCCTCCCGCTAACGTGTGTTTGGGCTGGTCCGGATTAGCAG
GTTGAACCCGCTCCCCAAAAACAACGCAAGTCGGTCGCATTCAGTGAAGG
CGCTGTCATTATGGATACCAACGGCGAAGTGACGGAGGCTGCTCCGGTTG
TTGAGAAGCCGGTTTCTGAGACTGAGGGTATATACCTTTCTCCCCTCTCG
ACTTGTGGATATCAAATTTGATATTGACCTCTACGCATCACCTACAGACA
AGGCCGTCGACGAAGTTACCGAACTCTTCAAGGGTCTTTCGAAAAAGAAG
AAGAGCAAGAAGCCCAAGGACACCGAGGGCGATGACGAGACCCCCGCCGC
CGACGGCGAGTTCGACCCCTCCGCTCTGAAGAAGAAGAAGAAGAAGCCGA
AGAAGGTCGACGCGGGCGATTTCGAGGCCAAGCTGGCTGAGGCCGGTGTT
GCAGAGAAGGAAGGTGCCGTCGCCGAGGAGAAGGAAGAGGTCGTCCCCGA
GGGAGACCACGAAGCTGGAACCGGTATCTGGGCTCACGACGCCGCGCAAC
CCATCCCGTACTCGCTGCTTGTGTCCCGATTCTTCTCCCTCATTCAGAGC
CACCACCCCGATCTGTTGTCCAGCGGTACCAAGTCGTATAAGATCCCGCC
GCCCCAGTGTCTGCGTGAAGGTAACCGTCGTACGATTTTCGCCAACATTG
CCGATATCTGCAAGCGCATGAAGCGGTCCGATGATCACGTTATGCAGTTC
TTGTTCGCCGAATTGGGTACCAGTGGTAGTGTGGACGGTAGCCGTCGTCT
GGTTATCAAGGGTCGTTTCCAGCAGAAGCAGATTGAGAACGTCTTGAGAA
GATACATCGGTATGTTGCTTTGCTATATGGTTATTTTCTAAATCAATAAC
GACACTAACGTTGTACAGTCGAATACGTCACCTGCAAGACCTGCCGCAGT
CCCGACACCGAGCTCAACAAGGGTGAGAACCGTCTATACTTCGTCACCTG
CAACTCTTGCGGTTCTCGTCGTTCCGTCGCCGCCATCAAGACCGGTTTCC
GTGGACAGGTCGGCCGCAGAAAGAGACAGGGTTAAGCAGGTTAATGGGAT
TTTTGTCAAAGGGGGAGAAGGATCCATGGAGGAAACTACCATGGTGTCTT
CGGTGGTATCTTCTGGCGCGGTTATGATTTGTTTCCCCCGCCTTTTTCGT
ATACAAAGACTTCTTTCTTTTTTTCCTTATCCTTTTTGCATTCCATCTCT
TATGTGAACATGTGGATGATGAACGTTGTGGATCGATTGATCCGATCTTG
GGTTTCGATCTTTCGGTTTAGGGTGCAAGGGATAAAAAAAAGGAAGAGGC
GAGAGAGACGAAGTGAAGATTTCTTAGCATGGCATGATAGGT
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Coding sequence (CDS) from alignment at ch4:3174591..3176382-

>KJC3_005595-T1 ID=KJC3_005595-T1|Name=KJC3_005595-T1|organism=Aspergillus niger KJC3|type=CDS|length=3684bp|location=Sequence derived from alignment at ch4:3174591..3176382- (Aspergillus niger KJC3)
TCGAATACGTCACCTGCAAGACCTGCCGCAGTCCCGACACCGAGCTCAAC
AAGGGTGAGAACCGTCTATACTTCGTCACCTGCAACTCTTGCGGTTCTCG
TCGTTCCGTCGCCGCCATCAAGACCGGTTTCCGTGGACAGGTCGGCCGCA
GAAAGAGACAGGGTTAAACAAGGCCGTCGACGAAGTTACCGAACTCTTCA
AGGGTCTTTCGAAAAAGAAGAAGAGCAAGAAGCCCAAGGACACCGAGGGC
GATGACGAGACCCCCGCCGCCGACGGCGAGTTCGACCCCTCCGCTCTGAA
GAAGAAGAAGAAGAAGCCGAAGAAGGTCGACGCGGGCGATTTCGAGGCCA
AGCTGGCTGAGGCCGGTGTTGCAGAGAAGGAAGGTGCCGTCGCCGAGGAG
AAGGAAGAGGTCGTCCCCGAGGGAGACCACGAAGCTGGAACCGGTATCTG
GGCTCACGACGCCGCGCAACCCATCCCGTACTCGCTGCTTGTGTCCCGAT
TCTTCTCCCTCATTCAGAGCCACCACCCCGATCTGTTGTCCAGCGGTACC
AAGTCGTATAAGATCCCGCCGCCCCAGTGTCTGCGTGAAGGTAACCGTCG
TACGATTTTCGCCAACATTGCCGATATCTGCAAGCGCATGAAGCGGTCCG
ATGATCACGTTATGCAGTTCTTGTTCGCCGAATTGGGTACCAGTGGTAGT
GTGGACGGTAGCCGTCGTCTGGTTATCAAGGGTCGTTTCCAGCAGAAGCA
GATTGAGAACGTCTTGAGAAGATACATCGCAGGTTGAACCCGCTCCCCAA
AAACAACGCAAGTCGGTCGCATTCAGTGAAGGCGCTGTCATTATGGATAC
CAACGGCGAAGTGACGGAGGCTGCTCCGGTTGTTGAGAAGCCGGTTTCTG
AGACTGAGGATGGCGGAGACTTCGAATACGTCACCTGCAAGACCTGCCGC
AGTCCCGACACCGAGCTCAACAAGGGTGAGAACCGTCTATACTTCGTCAC
CTGCAACTCTTGCGGTTCTCGTCGTTCCGTCGCCGCCATCAAGACCGGTT
TCCGTGGACAGGTCGGCCGCAGAAAGAGACAGGGTTAAACAAGGCCGTCG
ACGAAGTTACCGAACTCTTCAAGGGTCTTTCGAAAAAGAAGAAGAGCAAG
AAGCCCAAGGACACCGAGGGCGATGACGAGACCCCCGCCGCCGACGGCGA
GTTCGACCCCTCCGCTCTGAAGAAGAAGAAGAAGAAGCCGAAGAAGGTCG
ACGCGGGCGATTTCGAGGCCAAGCTGGCTGAGGCCGGTGTTGCAGAGAAG
GAAGGTGCCGTCGCCGAGGAGAAGGAAGAGGTCGTCCCCGAGGGAGACCA
CGAAGCTGGAACCGGTATCTGGGCTCACGACGCCGCGCAACCCATCCCGT
ACTCGCTGCTTGTGTCCCGATTCTTCTCCCTCATTCAGAGCCACCACCCC
GATCTGTTGTCCAGCGGTACCAAGTCGTATAAGATCCCGCCGCCCCAGTG
TCTGCGTGAAGGTAACCGTCGTACGATTTTCGCCAACATTGCCGATATCT
GCAAGCGCATGAAGCGGTCCGATGATCACGTTATGCAGTTCTTGTTCGCC
GAATTGGGTACCAGTGGTAGTGTGGACGGTAGCCGTCGTCTGGTTATCAA
GGGTCGTTTCCAGCAGAAGCAGATTGAGAACGTCTTGAGAAGATACATCG
CAGGTTGAACCCGCTCCCCAAAAACAACGCAAGTCGGTCGCATTCAGTGA
AGGCGCTGTCATTATGGATACCAACGGCGAAGTGACGGAGGCTGCTCCGG
TTGTTGAGAAGCCGGTTTCTGAGACTGAGGATGGCGGAGACTTCGAATAC
GTCACCTGCAAGACCTGCCGCAGTCCCGACACCGAGCTCAACAAGGGTGA
GAACCGTCTATACTTCGTCACCTGCAACTCTTGCGGTTCTCGTCGTTCCG
TCGCCGCCATCAAGACCGGTTTCCGTGGACAGGTCGGCCGCAGAAAGAGA
CAGGGTTAAACAAGGCCGTCGACGAAGTTACCGAACTCTTCAAGGGTCTT
TCGAAAAAGAAGAAGAGCAAGAAGCCCAAGGACACCGAGGGCGATGACGA
GACCCCCGCCGCCGACGGCGAGTTCGACCCCTCCGCTCTGAAGAAGAAGA
AGAAGAAGCCGAAGAAGGTCGACGCGGGCGATTTCGAGGCCAAGCTGGCT
GAGGCCGGTGTTGCAGAGAAGGAAGGTGCCGTCGCCGAGGAGAAGGAAGA
GGTCGTCCCCGAGGGAGACCACGAAGCTGGAACCGGTATCTGGGCTCACG
ACGCCGCGCAACCCATCCCGTACTCGCTGCTTGTGTCCCGATTCTTCTCC
CTCATTCAGAGCCACCACCCCGATCTGTTGTCCAGCGGTACCAAGTCGTA
TAAGATCCCGCCGCCCCAGTGTCTGCGTGAAGGTAACCGTCGTACGATTT
TCGCCAACATTGCCGATATCTGCAAGCGCATGAAGCGGTCCGATGATCAC
GTTATGCAGTTCTTGTTCGCCGAATTGGGTACCAGTGGTAGTGTGGACGG
TAGCCGTCGTCTGGTTATCAAGGGTCGTTTCCAGCAGAAGCAGATTGAGA
ACGTCTTGAGAAGATACATCGCAGGTTGAACCCGCTCCCCAAAAACAACG
CAAGTCGGTCGCATTCAGTGAAGGCGCTGTCATTATGGATACCAACGGCG
AAGTGACGGAGGCTGCTCCGGTTGTTGAGAAGCCGGTTTCTGAGACTGAG
GATGGCGGAGACTTCGAATACGTCACCTGCAAGACCTGCCGCAGTCCCGA
CACCGAGCTCAACAAGGGTGAGAACCGTCTATACTTCGTCACCTGCAACT
CTTGCGGTTCTCGTCGTTCCGTCGCCGCCATCAAGACCGGTTTCCGTGGA
CAGGTCGGCCGCAGAAAGAGACAGGGTTAAACAAGGCCGTCGACGAAGTT
ACCGAACTCTTCAAGGGTCTTTCGAAAAAGAAGAAGAGCAAGAAGCCCAA
GGACACCGAGGGCGATGACGAGACCCCCGCCGCCGACGGCGAGTTCGACC
CCTCCGCTCTGAAGAAGAAGAAGAAGAAGCCGAAGAAGGTCGACGCGGGC
GATTTCGAGGCCAAGCTGGCTGAGGCCGGTGTTGCAGAGAAGGAAGGTGC
CGTCGCCGAGGAGAAGGAAGAGGTCGTCCCCGAGGGAGACCACGAAGCTG
GAACCGGTATCTGGGCTCACGACGCCGCGCAACCCATCCCGTACTCGCTG
CTTGTGTCCCGATTCTTCTCCCTCATTCAGAGCCACCACCCCGATCTGTT
GTCCAGCGGTACCAAGTCGTATAAGATCCCGCCGCCCCAGTGTCTGCGTG
AAGGTAACCGTCGTACGATTTTCGCCAACATTGCCGATATCTGCAAGCGC
ATGAAGCGGTCCGATGATCACGTTATGCAGTTCTTGTTCGCCGAATTGGG
TACCAGTGGTAGTGTGGACGGTAGCCGTCGTCTGGTTATCAAGGGTCGTT
TCCAGCAGAAGCAGATTGAGAACGTCTTGAGAAGATACATCGCAGGTTGA
ACCCGCTCCCCAAAAACAACGCAAGTCGGTCGCATTCAGTGAAGGCGCTG
TCATTATGGATACCAACGGCGAAGTGACGGAGGCTGCTCCGGTTGTTGAG
AAGCCGGTTTCTGAGACTGAGGATGGCGGAGACT
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0006413translational initiation
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO:0003743translation initiation factor activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_005595KJC3_005595Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005595-T1KJC3_005595-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005595-T1.cdsKJC3_005595-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005595-T1.utr3p1KJC3_005595-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005595-T1.exon4KJC3_005595-T1.exon4Aspergillus niger KJC3exon
KJC3_005595-T1.exon3KJC3_005595-T1.exon3Aspergillus niger KJC3exon
KJC3_005595-T1.exon2KJC3_005595-T1.exon2Aspergillus niger KJC3exon
KJC3_005595-T1.exon1KJC3_005595-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005595-T1.utr5p1KJC3_005595-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
NoteBUSCO:EOG09264OQ8
DBxrefInterPro:IPR016190
DBxrefInterPro:IPR016189
DBxrefInterPro:IPR000048
DBxrefInterPro:IPR002735
DBxrefPFAM:PF01873
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch4supercontigch4:3174591..3176382 -
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