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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:3180621..3182977- Legend: exonfive_prime_UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_005598-T1 ID=KJC3_005598-T1|Name=KJC3_005598-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2357bp|location=Sequence derived from alignment at ch4:3180621..3182977- (Aspergillus niger KJC3)
ATTTGGCAACCGCGACATCTCCTGAGGCAACAGTGACGCCAAAAGATGGT
CAAGATGTCATCCGGGAAGCTCCTGCCTACACCCACACCCACACACACAT
TTGCTCTCTTCCACAACTCTCGCCACATCTTTCCTCGACTCACTGACCAC
ACTCCTATCTCCTACCAGCTCACACAACATGGCTCATGTCAGTTCTAATC
CGCTACGACACTCCGACCTCTACAATAGAATCGAGGACTGGATCACTGAA
TCAGATGCCGCACAGAATGGCTACGAAGCACAAGATACACGAAGCTCTCT
ACTCCACCGTAGGCCTTATTTATCGTTACCCGCATTTGAGGCCTTAAGTG
CACCTCTGACAACCTACAGCTCCTTACTATTACCTACAACCGGTGTCTTA
TGCCTTTGACAAAGATCGATACGATGAAATAATGAAGAGAAATGCGGAAC
TTGGGAACATGCCAACCCGCTTTGCTGAACGGCAGCCAGGGTGGCTTGGG
CGGGAGAATTATTACGCTCAAAGAGGAGGGGTCACTATGTGTTATCCCTC
TGTGCAGCAACGACAGGCTCGTGTGAGTCAGATGGCTTCACTCGAGCCAA
CAGAATCCCAACAGTCAGGTGCATCATCAACAGTAAATGATATGGAAACA
TCTTCAAACACCGAAAAAAGGGGACGGAACGGTTATGAGCGGCAGCCTCG
ACACAGAACCAAGAAAGACCGATATGAGTACAAGGTTCAGAATAAGAAGA
GCAGCGAACGCTCCCGTTCGAAGAAGAGGACAAACAACGACAGCTTTCGT
GCCCCCAACGTGCCCTGTGATCGTCTTACTGTGAGTGGCCATGCTACTAC
GCCTAAAGTGAGAGGGCTAATACCATCACAGCTGAATCAAAGGTGCCCGA
GCGGGATTTTCAGAAGAGGAAAGGCATCATCTCCTGTCAGAACCCGCAGC
CGCGATCCGTCGCTCGACTTCTTCGGATTTGATACGATTCTGAATTCAGA
AACCAAAGCTAGTGTTGGCTCTGGTTTCTCTGAAAGCGACTTTCTTCATG
GGAGCAATACCAATCAAGCTACCCTAAACGGCCCGACCTATGGACACTTC
GAGGAAGAATGCGGTTCGATCACAGGGGGGACCATGTATAAGAATGTTGT
CTCGGACACCCCCTCTGCAGTCGCCCTCTATCGCTCACAAGAATTACCCA
AAGCAGACGACCTTGCTACCGAGCCCAAGGCAATGACTGCCATTTCAGAA
CCTGCTACAGACAGTTACGTGTCTGCTCTTGTTAACCCGCCAAGTAGAAA
TTCTGAGGTGCGCTGTGATAAGGAACCAGGCTCCCAGTTGACTAGTCATA
ATATAGTCGATAATACAAGCGTAGATGAAGGCCAGTGGTGCTCCACTAGA
CTTGATGGAGTCTCTCAGAAGTGCAAGCATCCCTGTGACGCCATGAGGTT
GGATGAGCTCGCAGACAGATCTGTTGATGAAAACAAAGCAGACGACCAAG
GGATCAAGGAACGGGGATTAGACAAGAAAGTTGTGGCAGCTCCTGTGCAC
GGCAATACTATCAGCCAATTTGCCTGGCCCAATGCCAGCAAGTGCCGGCA
GCCAACCTTGGAGCCTGGCAGCACCTCCGTGGCTGACACTGAGGAATTTG
ATTATGAAGGAGCAATGGGTGCCAAGCTCCGAAAAACAATCACACCAGAC
TACGACCTACTCTCCCGGTTCCTGAATAATGGCAGCAGGGATAAGTCGTC
CTTGATGTCCGATGTCGACAATCGTGGCGAAAACATGCAGGGTCATCAGA
GCCAAATTAGACAGATGATCGAGGAACCAGATTATGAGAGCTTGGACTTT
GCAGGTGTGCCTGAAGCCAATGACTGCTGTTCAGAGTTGGCGAGTTTGAT
TGACATGGAGGAGTGGGAGATAGCATCTGTCATTGTTGATATGGATACAG
AGCTTGACACCCAGGTCTTGAGTATGCCAACCTCGAGTGCAGCCGTCTGC
AATAAAACACAAGAAATACAGGAACGCCTCGAGGCCACACAGCTTGGCAG
AAATATTCAGGGAAAACAGCCGCACCATATCTGTGAGGCAATGCTTGAGG
AATCCTTAATTGCCTTGTCTTCTCCCGACAACATGCGAGAAACCTCATCA
GCCGCCAAAGGAAGCCGGGTGAGAAACAAATGCCAGCGGTCAAAACATGA
TAAATTGGTAGCATCAGAAGCCACGAATATCTTCCGTCCGGGGCCCTGGC
TGGAGTCGCTGTCACGACGAAGGCGTGGGGCTATTGGAACACTGAATGGT
CACTTGGACGCCACTGATGGGCTTGGGACATTTTGGCAGCAAAGAATGGG
CTACTGA back to topCoding sequence (CDS) from alignment at ch4:3180621..3182977- >KJC3_005598-T1 ID=KJC3_005598-T1|Name=KJC3_005598-T1|organism=Aspergillus niger KJC3|type=CDS|length=6201bp|location=Sequence derived from alignment at ch4:3180621..3182977- (Aspergillus niger KJC3)
CTGAATCAAAGGTGCCCGAGCGGGATTTTCAGAAGAGGAAAGGCATCATC
TCCTGTCAGAACCCGCAGCCGCGATCCGTCGCTCGACTTCTTCGGATTTG
ATACGATTCTGAATTCAGAAACCAAAGCTAGTGTTGGCTCTGGTTTCTCT
GAAAGCGACTTTCTTCATGGGAGCAATACCAATCAAGCTACCCTAAACGG
CCCGACCTATGGACACTTCGAGGAAGAATGCGGTTCGATCACAGGGGGGA
CCATGTATAAGAATGTTGTCTCGGACACCCCCTCTGCAGTCGCCCTCTAT
CGCTCACAAGAATTACCCAAAGCAGACGACCTTGCTACCGAGCCCAAGGC
AATGACTGCCATTTCAGAACCTGCTACAGACAGTTACGTGTCTGCTCTTG
TTAACCCGCCAAGTAGAAATTCTGAGGTGCGCTGTGATAAGGAACCAGGC
TCCCAGTTGACTAGTCATAATATAGTCGATAATACAAGCGTAGATGAAGG
CCAGTGGTGCTCCACTAGACTTGATGGAGTCTCTCAGAAGTGCAAGCATC
CCTGTGACGCCATGAGGTTGGATGAGCTCGCAGACAGATCTGTTGATGAA
AACAAAGCAGACGACCAAGGGATCAAGGAACGGGGATTAGACAAGAAAGT
TGTGGCAGCTCCTGTGCACGGCAATACTATCAGCCAATTTGCCTGGCCCA
ATGCCAGCAAGTGCCGGCAGCCAACCTTGGAGCCTGGCAGCACCTCCGTG
GCTGACACTGAGGAATTTGATTATGAAGGAGCAATGGGTGCCAAGCTCCG
AAAAACAATCACACCAGACTACGACCTACTCTCCCGGTTCCTGAATAATG
GCAGCAGGGATAAGTCGTCCTTGATGTCCGATGTCGACAATCGTGGCGAA
AACATGCAGGGTCATCAGAGCCAAATTAGACAGATGATCGAGGAACCAGA
TTATGAGAGCTTGGACTTTGCAGGTGTGCCTGAAGCCAATGACTGCTGTT
CAGAGTTGGCGAGTTTGATTGACATGGAGGAGTGGGAGATAGCATCTGTC
ATTGTTGATATGGATACAGAGCTTGACACCCAGGTCTTGAGTATGCCAAC
CTCGAGTGCAGCCGTCTGCAATAAAACACAAGAAATACAGGAACGCCTCG
AGGCCACACAGCTTGGCAGAAATATTCAGGGAAAACAGCCGCACCATATC
TGTGAGGCAATGCTTGAGGAATCCTTAATTGCCTTGTCTTCTCCCGACAA
CATGCGAGAAACCTCATCAGCCGCCAAAGGAAGCCGGGTGAGAAACAAAT
GCCAGCGGTCAAAACATGATAAATTGGTAGCATCAGAAGCCACGAATATC
TTCCGTCCGGGGCCCTGGCTGGAGTCGCTGTCACGACGAAGGCGTGGGGC
TATTGGAACACTGAATGGTCACTTGGACGCCACTGATGGGCTTGGGACAT
TTTGGCAGCAAAGAATGGGCTACTGACTCCTTACTATTACCTACAACCGG
TGTCTTATGCCTTTGACAAAGATCGATACGATGAAATAATGAAGAGAAAT
GCGGAACTTGGGAACATGCCAACCCGCTTTGCTGAACGGCAGCCAGGGTG
GCTTGGGCGGGAGAATTATTACGCTCAAAGAGGAGGGGTCACTATGTGTT
ATCCCTCTGTGCAGCAACGACAGGCTCGTGTGAGTCAGATGGCTTCACTC
GAGCCAACAGAATCCCAACAGTCAGGTGCATCATCAACAGTAAATGATAT
GGAAACATCTTCAAACACCGAAAAAAGGGGACGGAACGGTTATGAGCGGC
AGCCTCGACACAGAACCAAGAAAGACCGATATGAGTACAAGGTTCAGAAT
AAGAAGAGCAGCGAACGCTCCCGTTCGAAGAAGAGGACAAACAACGACAG
CTTTCGTGCCCCCAACGTGCCCTGTGATCGTCTTACTATGGCTCATGTCA
GTTCTAATCCGCTACGACACTCCGACCTCTACAATAGAATCGAGGACTGG
ATCACTGAATCAGATGCCGCACAGAATGGCTACGAAGCACAAGATACACG
AAGCTCTCTACTCCACCCTGAATCAAAGGTGCCCGAGCGGGATTTTCAGA
AGAGGAAAGGCATCATCTCCTGTCAGAACCCGCAGCCGCGATCCGTCGCT
CGACTTCTTCGGATTTGATACGATTCTGAATTCAGAAACCAAAGCTAGTG
TTGGCTCTGGTTTCTCTGAAAGCGACTTTCTTCATGGGAGCAATACCAAT
CAAGCTACCCTAAACGGCCCGACCTATGGACACTTCGAGGAAGAATGCGG
TTCGATCACAGGGGGGACCATGTATAAGAATGTTGTCTCGGACACCCCCT
CTGCAGTCGCCCTCTATCGCTCACAAGAATTACCCAAAGCAGACGACCTT
GCTACCGAGCCCAAGGCAATGACTGCCATTTCAGAACCTGCTACAGACAG
TTACGTGTCTGCTCTTGTTAACCCGCCAAGTAGAAATTCTGAGGTGCGCT
GTGATAAGGAACCAGGCTCCCAGTTGACTAGTCATAATATAGTCGATAAT
ACAAGCGTAGATGAAGGCCAGTGGTGCTCCACTAGACTTGATGGAGTCTC
TCAGAAGTGCAAGCATCCCTGTGACGCCATGAGGTTGGATGAGCTCGCAG
ACAGATCTGTTGATGAAAACAAAGCAGACGACCAAGGGATCAAGGAACGG
GGATTAGACAAGAAAGTTGTGGCAGCTCCTGTGCACGGCAATACTATCAG
CCAATTTGCCTGGCCCAATGCCAGCAAGTGCCGGCAGCCAACCTTGGAGC
CTGGCAGCACCTCCGTGGCTGACACTGAGGAATTTGATTATGAAGGAGCA
ATGGGTGCCAAGCTCCGAAAAACAATCACACCAGACTACGACCTACTCTC
CCGGTTCCTGAATAATGGCAGCAGGGATAAGTCGTCCTTGATGTCCGATG
TCGACAATCGTGGCGAAAACATGCAGGGTCATCAGAGCCAAATTAGACAG
ATGATCGAGGAACCAGATTATGAGAGCTTGGACTTTGCAGGTGTGCCTGA
AGCCAATGACTGCTGTTCAGAGTTGGCGAGTTTGATTGACATGGAGGAGT
GGGAGATAGCATCTGTCATTGTTGATATGGATACAGAGCTTGACACCCAG
GTCTTGAGTATGCCAACCTCGAGTGCAGCCGTCTGCAATAAAACACAAGA
AATACAGGAACGCCTCGAGGCCACACAGCTTGGCAGAAATATTCAGGGAA
AACAGCCGCACCATATCTGTGAGGCAATGCTTGAGGAATCCTTAATTGCC
TTGTCTTCTCCCGACAACATGCGAGAAACCTCATCAGCCGCCAAAGGAAG
CCGGGTGAGAAACAAATGCCAGCGGTCAAAACATGATAAATTGGTAGCAT
CAGAAGCCACGAATATCTTCCGTCCGGGGCCCTGGCTGGAGTCGCTGTCA
CGACGAAGGCGTGGGGCTATTGGAACACTGAATGGTCACTTGGACGCCAC
TGATGGGCTTGGGACATTTTGGCAGCAAAGAATGGGCTACTGACTCCTTA
CTATTACCTACAACCGGTGTCTTATGCCTTTGACAAAGATCGATACGATG
AAATAATGAAGAGAAATGCGGAACTTGGGAACATGCCAACCCGCTTTGCT
GAACGGCAGCCAGGGTGGCTTGGGCGGGAGAATTATTACGCTCAAAGAGG
AGGGGTCACTATGTGTTATCCCTCTGTGCAGCAACGACAGGCTCGTGTGA
GTCAGATGGCTTCACTCGAGCCAACAGAATCCCAACAGTCAGGTGCATCA
TCAACAGTAAATGATATGGAAACATCTTCAAACACCGAAAAAAGGGGACG
GAACGGTTATGAGCGGCAGCCTCGACACAGAACCAAGAAAGACCGATATG
AGTACAAGGTTCAGAATAAGAAGAGCAGCGAACGCTCCCGTTCGAAGAAG
AGGACAAACAACGACAGCTTTCGTGCCCCCAACGTGCCCTGTGATCGTCT
TACTATGGCTCATGTCAGTTCTAATCCGCTACGACACTCCGACCTCTACA
ATAGAATCGAGGACTGGATCACTGAATCAGATGCCGCACAGAATGGCTAC
GAAGCACAAGATACACGAAGCTCTCTACTCCACCCTGAATCAAAGGTGCC
CGAGCGGGATTTTCAGAAGAGGAAAGGCATCATCTCCTGTCAGAACCCGC
AGCCGCGATCCGTCGCTCGACTTCTTCGGATTTGATACGATTCTGAATTC
AGAAACCAAAGCTAGTGTTGGCTCTGGTTTCTCTGAAAGCGACTTTCTTC
ATGGGAGCAATACCAATCAAGCTACCCTAAACGGCCCGACCTATGGACAC
TTCGAGGAAGAATGCGGTTCGATCACAGGGGGGACCATGTATAAGAATGT
TGTCTCGGACACCCCCTCTGCAGTCGCCCTCTATCGCTCACAAGAATTAC
CCAAAGCAGACGACCTTGCTACCGAGCCCAAGGCAATGACTGCCATTTCA
GAACCTGCTACAGACAGTTACGTGTCTGCTCTTGTTAACCCGCCAAGTAG
AAATTCTGAGGTGCGCTGTGATAAGGAACCAGGCTCCCAGTTGACTAGTC
ATAATATAGTCGATAATACAAGCGTAGATGAAGGCCAGTGGTGCTCCACT
AGACTTGATGGAGTCTCTCAGAAGTGCAAGCATCCCTGTGACGCCATGAG
GTTGGATGAGCTCGCAGACAGATCTGTTGATGAAAACAAAGCAGACGACC
AAGGGATCAAGGAACGGGGATTAGACAAGAAAGTTGTGGCAGCTCCTGTG
CACGGCAATACTATCAGCCAATTTGCCTGGCCCAATGCCAGCAAGTGCCG
GCAGCCAACCTTGGAGCCTGGCAGCACCTCCGTGGCTGACACTGAGGAAT
TTGATTATGAAGGAGCAATGGGTGCCAAGCTCCGAAAAACAATCACACCA
GACTACGACCTACTCTCCCGGTTCCTGAATAATGGCAGCAGGGATAAGTC
GTCCTTGATGTCCGATGTCGACAATCGTGGCGAAAACATGCAGGGTCATC
AGAGCCAAATTAGACAGATGATCGAGGAACCAGATTATGAGAGCTTGGAC
TTTGCAGGTGTGCCTGAAGCCAATGACTGCTGTTCAGAGTTGGCGAGTTT
GATTGACATGGAGGAGTGGGAGATAGCATCTGTCATTGTTGATATGGATA
CAGAGCTTGACACCCAGGTCTTGAGTATGCCAACCTCGAGTGCAGCCGTC
TGCAATAAAACACAAGAAATACAGGAACGCCTCGAGGCCACACAGCTTGG
CAGAAATATTCAGGGAAAACAGCCGCACCATATCTGTGAGGCAATGCTTG
AGGAATCCTTAATTGCCTTGTCTTCTCCCGACAACATGCGAGAAACCTCA
TCAGCCGCCAAAGGAAGCCGGGTGAGAAACAAATGCCAGCGGTCAAAACA
TGATAAATTGGTAGCATCAGAAGCCACGAATATCTTCCGTCCGGGGCCCT
GGCTGGAGTCGCTGTCACGACGAAGGCGTGGGGCTATTGGAACACTGAAT
GGTCACTTGGACGCCACTGATGGGCTTGGGACATTTTGGCAGCAAAGAAT
GGGCTACTGACTCCTTACTATTACCTACAACCGGTGTCTTATGCCTTTGA
CAAAGATCGATACGATGAAATAATGAAGAGAAATGCGGAACTTGGGAACA
TGCCAACCCGCTTTGCTGAACGGCAGCCAGGGTGGCTTGGGCGGGAGAAT
TATTACGCTCAAAGAGGAGGGGTCACTATGTGTTATCCCTCTGTGCAGCA
ACGACAGGCTCGTGTGAGTCAGATGGCTTCACTCGAGCCAACAGAATCCC
AACAGTCAGGTGCATCATCAACAGTAAATGATATGGAAACATCTTCAAAC
ACCGAAAAAAGGGGACGGAACGGTTATGAGCGGCAGCCTCGACACAGAAC
CAAGAAAGACCGATATGAGTACAAGGTTCAGAATAAGAAGAGCAGCGAAC
GCTCCCGTTCGAAGAAGAGGACAAACAACGACAGCTTTCGTGCCCCCAAC
GTGCCCTGTGATCGTCTTACTATGGCTCATGTCAGTTCTAATCCGCTACG
ACACTCCGACCTCTACAATAGAATCGAGGACTGGATCACTGAATCAGATG
CCGCACAGAATGGCTACGAAGCACAAGATACACGAAGCTCTCTACTCCAC
C back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_005598-T1.utr5p1 | KJC3_005598-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch4 | supercontig | ch4:3180621..3182977 - |
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