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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:3225575..3226721+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_005613-T1 ID=KJC3_005613-T1|Name=KJC3_005613-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1147bp|location=Sequence derived from alignment at ch4:3225575..3226721+ (Aspergillus niger KJC3)
AGCAACCTCATCCTGTGCTTCATGCTTTTTGGGTATAACTCAGTACTTCG
GCTCTCTATTCCTTTGAAACACTTGCTTTTTGCGAAAAGTAGTTTCTAAT
CTACCGAGTGCAACCCTCGAAAGCTATCTCGACTACTTCAAGGGTCCCCA
ATTGACCGTTCTCTCGGAACCTTCCCTCCCGTGCCCCTCATCGAGTCACT
GCGGGTTGAGTTGATCACCAATACTACTACCACCACCCTCACCAACACAA
ACCCCCACATCAACCCAGACAACATGGCCTCCTACATGAACGCCAGTGAG
GCGCTGACCCAGCAACAACTCGCTCAAAATGCAGAGCAGCCCATCGCTCA
GTCCGCATGGGCAAACAAATACCGCGGGGTGAGTCCTCTGCCCTCTTCTC
CCCAATCGGTATTCCGCAAGAGTCAACAGGAACAAAATAACTAACACTCA
CCGGCATATTAGGCAACAGTAGAGGATCTGGACCCCAACCCAGCCCTATC
TGTTTCTCCCGATGACCTGATCTCCACCGCCATGATGGCCGCCTACGAAC
GCGATTACACACACCTGACCGTTACTTCCTCAACGAAACGTTCTCTGGTC
GGATACCTGAGCATCCCCCGACTAAAGGAGCTGCTCAAGGAGGGCGCTGT
CAAGGAGACCGACCCTGTTTCTGCTGCCATGCAGCGATTCAACCGCAAGA
AGGGTACATACCAGGTTATCACGATGGAGACGCCGCTGGAGGAGCTGGAG
CAGTTCTTTGAGAGTGAGACTGGTCCTAACGGGGAGAAGAGGGCTAAGCA
GGATTTCGCCGTGGTTACGGACGTTTCGCGCAAGTTCGTGTTGGGTGTTG
CGACAAAGGCGGATTTGGCTGAGTTTGTGAAGCGGAGACCGGCTTAAGTG
GTTGCATAATTGCATATTATGGATTTTTGGGCTTCTTTTTCTGTTGATAA
TTTGCATTATATAATGGAATGTTCGCTCTGGATATGCTGCTGTTGTTGTG
TGTGTGCATTTGGCAGCGCATCTTTAAGTGAACCAATACATCATTCTCCC
TGGGAGTTCGTTATAGCTTTTATATCCAGACTATCAGGGAACAAATTGGC
GGCTTTCACTGTGTATTATCCGCCTTATTGTTGACATAGTATGCCAT back to topCoding sequence (CDS) from alignment at ch4:3225575..3226721+ >KJC3_005613-T1 ID=KJC3_005613-T1|Name=KJC3_005613-T1|organism=Aspergillus niger KJC3|type=CDS|length=1080bp|location=Sequence derived from alignment at ch4:3225575..3226721+ (Aspergillus niger KJC3)
ATGGCCTCCTACATGAACGCCAGTGAGGCGCTGACCCAGCAACAACTCGC
TCAAAATGCAGAGCAGCCCATCGCTCAGTCCGCATGGGCAAACAAATACC
GCGGGGCAACAGTAGAGGATCTGGACCCCAACCCAGCCCTATCTGTTTCT
CCCGATGACCTGATCTCCACCGCCATGATGGCCGCCTACGAACGCGATTA
CACACACCTGACCGTTACTTCCTCAACGAAACGTTCTCTGGTCGGATACC
TGAGCATCCCCCGACTAAAGGAGCTGCTCAAGGAGGGCGCTGTCAAGGAG
ACCGACCCTGTTTCTGCTGCCATGCAGCGATTCAACCGCAAGAAGGGTAC
ATACCAGGTTATCACGATGGAGACGCCGCTGGAGGAGCTGGAGCAGTTCT
TTGAGAGTGAGACTGGTCCTAACGGGGAGAAGAGGGCTAAGCAGGATTTC
GCCGTGGTTACGGACGTTTCGCGCAAGTTCGTGTTGGGTGTTGCGACAAA
GGCGGATTTGGCTGAGTTTGTGAAGCGGAGACCGGCTTAAATGGCCTCCT
ACATGAACGCCAGTGAGGCGCTGACCCAGCAACAACTCGCTCAAAATGCA
GAGCAGCCCATCGCTCAGTCCGCATGGGCAAACAAATACCGCGGGGCAAC
AGTAGAGGATCTGGACCCCAACCCAGCCCTATCTGTTTCTCCCGATGACC
TGATCTCCACCGCCATGATGGCCGCCTACGAACGCGATTACACACACCTG
ACCGTTACTTCCTCAACGAAACGTTCTCTGGTCGGATACCTGAGCATCCC
CCGACTAAAGGAGCTGCTCAAGGAGGGCGCTGTCAAGGAGACCGACCCTG
TTTCTGCTGCCATGCAGCGATTCAACCGCAAGAAGGGTACATACCAGGTT
ATCACGATGGAGACGCCGCTGGAGGAGCTGGAGCAGTTCTTTGAGAGTGA
GACTGGTCCTAACGGGGAGAAGAGGGCTAAGCAGGATTTCGCCGTGGTTA
CGGACGTTTCGCGCAAGTTCGTGTTGGGTGTTGCGACAAAGGCGGATTTG
GCTGAGTTTGTGAAGCGGAGACCGGCTTAA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_005613-T1.utr5p1 | KJC3_005613-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_005613-T1.utr3p1 | KJC3_005613-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR000644 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch4 | supercontig | ch4:3225575..3226721 + |
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