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KJC3_005616-T1, KJC3_005616-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_005616-T1
Unique NameKJC3_005616-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch4:3232501..3233841-

Legend: CDSpolypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_005616-T1 ID=KJC3_005616-T1|Name=KJC3_005616-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1341bp|location=Sequence derived from alignment at ch4:3232501..3233841- (Aspergillus niger KJC3)
ATGGCCTCTCTAACTACTCCTCCCCGCGTCCCCATCCCCGCCAACGGGGT
CGACTACCGTGGCAAAGTAGTCCTGGCCCCTATGGTGCGCTCCGGCGAAT
TGCCCTCCCGCCTCATTGCCCTCAAGTATGGCGCCGATCTAGTTTGGGGC
CCTGAAACTATCGACCGGGCTATGGCAGGCGCCATCCGCCGTGTGAACCC
CCGCAACGGCACCATCGAATTCACCCGCATGCCCTCCAACGGCGGCCGCA
CCGAAAAGGCAGGCCAAGAATCCGTGATCTACCGTCTCGACCCCGTCCGC
GAGAAAGGCAAACTCATTTATCAAATTGGCACTGCGACGCCTGAAATCGC
CGTCCAAGCAGCCAAACTCGTCGCGGGCGATGTCGCCGGTATCGACGTGA
ACTCGGGATGTCCGAAACCCTTTAGCACGAGCGGTGGTATGGGTGCGGCG
CTTCTCAAGACACCGGATAAGTTGGTTGCGATTCTGGAAGCCCTGGTGAA
GGAGGTCGGGACGCCATTCCAGATCGGTATCTCGGTCAAGATCCGCATTT
TGAAAGATCCCGAGGAGACGAGAGCTCTGGTGTCGCGGCTCGTGAAGACA
GGCATTACGGGCTTGACAGTGCATTGTCGGACGCCGCCCATGAGGCCGCG
TGAACGCGCTATCCGTGATCAGGTGCGCATGATTGCCGACATCTGTCATG
AGGCTGGTGTCGCATGCGTTATAAACGGTGATGTAACCTCCAAAGATGAG
GGACACGCCTTGATGAAAGAGTTCGGCGTCGACGGCGCGATGATCGCCAC
AGCCGCAGAAGCAAACCCATCCTGCTTCCGTACCGAAGCCGAGGGCGGCC
TTCTCCCCTGGAAGGAGGTAGTCCACGAATATATCAAGTTCTGCCTCGAG
TCTGAGAACCGCTTCGGCAACTCCAAATATCTCCTCAACATCCTCGTCCC
CGGCAAGCTCCAGGAAGGCAAGCTTGCAAAGGCAGCCAGGTCCTATGCCG
ATACATGCCACGCCCTCGGATTCGAGGATCTCCTTCCCCTCGCCATGCAA
GTGGACGACATCCTCAACCTCACCGACAAGTCAGTCACTACCAAAGACCT
CCAGTCCGAACACACCCGCAGCAAGGCCGTTCAGAACGCCATGGAGAACA
ACGAATCCGCGCGGGCTGCTGGCGGTGCTTCTCGCGTCAAGTCCACCTCC
CCCGCAGTCAGCGCAGGCGGCCCCATTCGCACGAACTCCATCCCAGCTCC
TACGAAGACCAAGGCTGAGGCGGAGACCCAGGCCGATGTCTCTGTTCCGG
CTCCCGAAGCTGCGCCTCAGAAGCAGGAGCTGACAGCTTAA
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Coding sequence (CDS) from alignment at ch4:3232501..3233841-

>KJC3_005616-T1 ID=KJC3_005616-T1|Name=KJC3_005616-T1|organism=Aspergillus niger KJC3|type=CDS|length=1341bp|location=Sequence derived from alignment at ch4:3232501..3233841- (Aspergillus niger KJC3)
ATGGCCTCTCTAACTACTCCTCCCCGCGTCCCCATCCCCGCCAACGGGGT
CGACTACCGTGGCAAAGTAGTCCTGGCCCCTATGGTGCGCTCCGGCGAAT
TGCCCTCCCGCCTCATTGCCCTCAAGTATGGCGCCGATCTAGTTTGGGGC
CCTGAAACTATCGACCGGGCTATGGCAGGCGCCATCCGCCGTGTGAACCC
CCGCAACGGCACCATCGAATTCACCCGCATGCCCTCCAACGGCGGCCGCA
CCGAAAAGGCAGGCCAAGAATCCGTGATCTACCGTCTCGACCCCGTCCGC
GAGAAAGGCAAACTCATTTATCAAATTGGCACTGCGACGCCTGAAATCGC
CGTCCAAGCAGCCAAACTCGTCGCGGGCGATGTCGCCGGTATCGACGTGA
ACTCGGGATGTCCGAAACCCTTTAGCACGAGCGGTGGTATGGGTGCGGCG
CTTCTCAAGACACCGGATAAGTTGGTTGCGATTCTGGAAGCCCTGGTGAA
GGAGGTCGGGACGCCATTCCAGATCGGTATCTCGGTCAAGATCCGCATTT
TGAAAGATCCCGAGGAGACGAGAGCTCTGGTGTCGCGGCTCGTGAAGACA
GGCATTACGGGCTTGACAGTGCATTGTCGGACGCCGCCCATGAGGCCGCG
TGAACGCGCTATCCGTGATCAGGTGCGCATGATTGCCGACATCTGTCATG
AGGCTGGTGTCGCATGCGTTATAAACGGTGATGTAACCTCCAAAGATGAG
GGACACGCCTTGATGAAAGAGTTCGGCGTCGACGGCGCGATGATCGCCAC
AGCCGCAGAAGCAAACCCATCCTGCTTCCGTACCGAAGCCGAGGGCGGCC
TTCTCCCCTGGAAGGAGGTAGTCCACGAATATATCAAGTTCTGCCTCGAG
TCTGAGAACCGCTTCGGCAACTCCAAATATCTCCTCAACATCCTCGTCCC
CGGCAAGCTCCAGGAAGGCAAGCTTGCAAAGGCAGCCAGGTCCTATGCCG
ATACATGCCACGCCCTCGGATTCGAGGATCTCCTTCCCCTCGCCATGCAA
GTGGACGACATCCTCAACCTCACCGACAAGTCAGTCACTACCAAAGACCT
CCAGTCCGAACACACCCGCAGCAAGGCCGTTCAGAACGCCATGGAGAACA
ACGAATCCGCGCGGGCTGCTGGCGGTGCTTCTCGCGTCAAGTCCACCTCC
CCCGCAGTCAGCGCAGGCGGCCCCATTCGCACGAACTCCATCCCAGCTCC
TACGAAGACCAAGGCTGAGGCGGAGACCCAGGCCGATGTCTCTGTTCCGG
CTCCCGAAGCTGCGCCTCAGAAGCAGGAGCTGACAGCTTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0008033tRNA processing
GO:0055114oxidation-reduction process
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
GO:0050660flavin adenine dinucleotide binding
GO:0017150tRNA dihydrouridine synthase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_005616KJC3_005616Aspergillus niger KJC3gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005616-T1.cdsKJC3_005616-T1.cdsAspergillus niger KJC3CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005616-T1.exon1KJC3_005616-T1.exon1Aspergillus niger KJC3exon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005616-T1KJC3_005616-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
NoteBUSCO:EOG092628FW
DBxrefInterPro:IPR035587
DBxrefInterPro:IPR018517
DBxrefInterPro:IPR013785
DBxrefInterPro:IPR001269
DBxrefPFAM:PF01207
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch4supercontigch4:3232501..3233841 -
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