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KJC3_005620-T1, KJC3_005620-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_005620-T1
Unique NameKJC3_005620-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch4:3239659..3241338+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_005620-T1 ID=KJC3_005620-T1|Name=KJC3_005620-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1680bp|location=Sequence derived from alignment at ch4:3239659..3241338+ (Aspergillus niger KJC3)
GATCATTTAATCGCAGTGCTGAAGTCTGGTACTCGCTCTCTAAGCCATGG
CTGCCAATTTCTTCAACAACAAGGCCCGCGCTGCTGCGGCAGCAGCGAAC
CCTTCGAAGCCGAAGCCCACAGATAACAAGGAAGAACAAGCAAAGCAACA
ACCATGGGTTGAGAAATAGTATGCCAACTACTAGACCAGACAGTATAGCA
CTCAAACTGACAGCCACATAGCCGTCCCAAGACCCTCGATGATGTCGCCG
CCCAAGATCACACAACCAAAGTCCTTCAACGAACACTCCAAGCTTCCAAC
GTACGAAATGAATTCTATCGTCAACCAGAAGAAACGACAACCTGCTAACG
AGTACCCAGCTCCCCCACATGCTCTTCTACGGACCCCCAGGTACCGGAAA
AACATCCACCATTCTCGCCCTCGCCAAATCCCTCTTCGGACCTTCCCTCT
ACCGCTCGCGCATTCTGGAACTGAACGCCTCCGACGAACGAGGTATCGGT
ATCGTGCGTGAAAAGATTAAGAACTTTGCCCGTGCTCAACTCACACACTC
TACGGGGTTGGGTGAGGAATACTTGGCACAATACCCGTGCCCGCCATTTA
AGATTATTATTCTCGATGAGGCGGACAGCATGACGCAGGATGCGCAGTCT
GCGTTGCGTCGCACGATGGAGCAGTATAGTCGGATTACCCGTTTCTGCTT
AGTTTGCAACTACGTCACGCGAATCATTGAGCCGCTGGCGAGTCGATGCA
GCAAGTTTCGATTCAAGGCTTTGGATAACACGGCCGCTGGAGAGAGATTG
GAACATATTGCCAAGGTGGAGAATCTAAGGTTGGAGGATGGAGTTGTGGA
TAAGTTGATTGCTTGCAGTGAGGGTGATATGCGACGGGCGATTACGTATA
TGCAGAGTGCGGCTAAGCTTGTCGGGGCTGGCCGGGCTGGGAAGAAGGAC
GAGGACGAGGACGAGGAGATGACAGACCAGGAGTCGGAGGTGATTACTGT
TCGGACAATTGAGGAGATTGCTGGTGTTGTTCCGGAAAGTGTATTGGATG
CGTTGGTGCAGGCGATGCAGCCGAAGAAGATCGGGTCCTCGTATGAGGCT
GTTGCGAAGGTGGTTACGGATATCATTGCTGATGGGTGGAGTGCAACGCA
GCTTCTTTTACAGGTATGTAATCGGATAAAGTGGGAGTGTATTGATGCTA
ACTTTGGGTAGTTGTATCGACGGGTGGTGTTCAACGACGCGATCCCTGAT
ATCCAGAAGAACAAAATCGTTATGGTGTTCTCGGATATGGATCGACGTCT
GGTTGATGGTGCAGACGAGCATCTGTCTATCTTGGATGTGGCCCTTAAGA
TCTCTGGCATCCTGGGAGGAGCTTAGATCAAGTTAGAGAATCCGAGATTC
CTGGCTACTCTACTTCATAAACAGTGCTTCCCGCTGCGACACCTCCGGTA
GGATGTGGAAGAGCCGGCGGCAAGCCGTGCATCCTGATGATATCAGAGGA
TGCAGAAAAAAAACCGCGGAATATGCGACGTCGTCCACAGTGGCAGTGAA
CTGAACATACAGTAGCGGCCGCTACCAGTGGAAACAGCAGACGTGCTGCT
CCATTCGATTAATTATTTGCTCGGAGAGGATTTGAAATTTTACGACTGTA
TGATATATTAATGAACGAGCTAAAAGCGTC
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Coding sequence (CDS) from alignment at ch4:3239659..3241338+

>KJC3_005620-T1 ID=KJC3_005620-T1|Name=KJC3_005620-T1|organism=Aspergillus niger KJC3|type=CDS|length=4680bp|location=Sequence derived from alignment at ch4:3239659..3241338+ (Aspergillus niger KJC3)
ATGGCTGCCAATTTCTTCAACAACAAGGCCCGCGCTGCTGCGGCAGCAGC
GAACCCTTCGAAGCCGAAGCCCACAGATAACAAGGAAGAACAAGCAAAGC
AACAACCATGGGTTGAGAAATACCGTCCCAAGACCCTCGATGATGTCGCC
GCCCAAGATCACACAACCAAAGTCCTTCAACGAACACTCCAAGCTTCCAA
CCTCCCCCACATGCTCTTCTACGGACCCCCAGGTACCGGAAAAACATCCA
CCATTCTCGCCCTCGCCAAATCCCTCTTCGGACCTTCCCTCTACCGCTCG
CGCATTCTGGAACTGAACGCCTCCGACGAACGAGGTATCGGTATCGTGCG
TGAAAAGATTAAGAACTTTGCCCGTGCTCAACTCACACACTCTACGGGGT
TGGGTGAGGAATACTTGGCACAATACCCGTGCCCGCCATTTAAGATTATT
ATTCTCGATGAGGCGGACAGCATGACGCAGGATGCGCAGTCTGCGTTGCG
TCGCACGATGGAGCAGTATAGTCGGATTACCCGTTTCTGCTTAGTTTGCA
ACTACGTCACGCGAATCATTGAGCCGCTGGCGAGTCGATGCAGCAAGTTT
CGATTCAAGGCTTTGGATAACACGGCCGCTGGAGAGAGATTGGAACATAT
TGCCAAGGTGGAGAATCTAAGGTTGGAGGATGGAGTTGTGGATAAGTTGA
TTGCTTGCAGTGAGGGTGATATGCGACGGGCGATTACGTATATGCAGAGT
GCGGCTAAGCTTGTCGGGGCTGGCCGGGCTGGGAAGAAGGACGAGGACGA
GGACGAGGAGATGACAGACCAGGAGTCGGAGGTGATTACTGTTCGGACAA
TTGAGGAGATTGCTGGTGTTGTTCCGGAAAGTGTATTGGATGCGTTGGTG
CAGGCGATGCAGCCGAAGAAGATCGGGTCCTCGTATGAGGCTGTTGCGAA
GGTGGTTACGGATATCATTGCTGATGGGTGGAGTGCAACGCAGCTTCTTT
TACAGTTGTATCGACGGGTGGTGTTCAACGACGCGATCCCTGATATCCAG
AAGAACAAAATCGTTATGGTGTTCTCGGATATGGATCGACGTCTGGTTGA
TGGTGCAGACGAGCATCTGTCTATCTTGGATGTGGCCCTTAAGATCTCTG
GCATCCTGGGAGGAGCTTAGATGGCTGCCAATTTCTTCAACAACAAGGCC
CGCGCTGCTGCGGCAGCAGCGAACCCTTCGAAGCCGAAGCCCACAGATAA
CAAGGAAGAACAAGCAAAGCAACAACCATGGGTTGAGAAATACCGTCCCA
AGACCCTCGATGATGTCGCCGCCCAAGATCACACAACCAAAGTCCTTCAA
CGAACACTCCAAGCTTCCAACCTCCCCCACATGCTCTTCTACGGACCCCC
AGGTACCGGAAAAACATCCACCATTCTCGCCCTCGCCAAATCCCTCTTCG
GACCTTCCCTCTACCGCTCGCGCATTCTGGAACTGAACGCCTCCGACGAA
CGAGGTATCGGTATCGTGCGTGAAAAGATTAAGAACTTTGCCCGTGCTCA
ACTCACACACTCTACGGGGTTGGGTGAGGAATACTTGGCACAATACCCGT
GCCCGCCATTTAAGATTATTATTCTCGATGAGGCGGACAGCATGACGCAG
GATGCGCAGTCTGCGTTGCGTCGCACGATGGAGCAGTATAGTCGGATTAC
CCGTTTCTGCTTAGTTTGCAACTACGTCACGCGAATCATTGAGCCGCTGG
CGAGTCGATGCAGCAAGTTTCGATTCAAGGCTTTGGATAACACGGCCGCT
GGAGAGAGATTGGAACATATTGCCAAGGTGGAGAATCTAAGGTTGGAGGA
TGGAGTTGTGGATAAGTTGATTGCTTGCAGTGAGGGTGATATGCGACGGG
CGATTACGTATATGCAGAGTGCGGCTAAGCTTGTCGGGGCTGGCCGGGCT
GGGAAGAAGGACGAGGACGAGGACGAGGAGATGACAGACCAGGAGTCGGA
GGTGATTACTGTTCGGACAATTGAGGAGATTGCTGGTGTTGTTCCGGAAA
GTGTATTGGATGCGTTGGTGCAGGCGATGCAGCCGAAGAAGATCGGGTCC
TCGTATGAGGCTGTTGCGAAGGTGGTTACGGATATCATTGCTGATGGGTG
GAGTGCAACGCAGCTTCTTTTACAGTTGTATCGACGGGTGGTGTTCAACG
ACGCGATCCCTGATATCCAGAAGAACAAAATCGTTATGGTGTTCTCGGAT
ATGGATCGACGTCTGGTTGATGGTGCAGACGAGCATCTGTCTATCTTGGA
TGTGGCCCTTAAGATCTCTGGCATCCTGGGAGGAGCTTAGATGGCTGCCA
ATTTCTTCAACAACAAGGCCCGCGCTGCTGCGGCAGCAGCGAACCCTTCG
AAGCCGAAGCCCACAGATAACAAGGAAGAACAAGCAAAGCAACAACCATG
GGTTGAGAAATACCGTCCCAAGACCCTCGATGATGTCGCCGCCCAAGATC
ACACAACCAAAGTCCTTCAACGAACACTCCAAGCTTCCAACCTCCCCCAC
ATGCTCTTCTACGGACCCCCAGGTACCGGAAAAACATCCACCATTCTCGC
CCTCGCCAAATCCCTCTTCGGACCTTCCCTCTACCGCTCGCGCATTCTGG
AACTGAACGCCTCCGACGAACGAGGTATCGGTATCGTGCGTGAAAAGATT
AAGAACTTTGCCCGTGCTCAACTCACACACTCTACGGGGTTGGGTGAGGA
ATACTTGGCACAATACCCGTGCCCGCCATTTAAGATTATTATTCTCGATG
AGGCGGACAGCATGACGCAGGATGCGCAGTCTGCGTTGCGTCGCACGATG
GAGCAGTATAGTCGGATTACCCGTTTCTGCTTAGTTTGCAACTACGTCAC
GCGAATCATTGAGCCGCTGGCGAGTCGATGCAGCAAGTTTCGATTCAAGG
CTTTGGATAACACGGCCGCTGGAGAGAGATTGGAACATATTGCCAAGGTG
GAGAATCTAAGGTTGGAGGATGGAGTTGTGGATAAGTTGATTGCTTGCAG
TGAGGGTGATATGCGACGGGCGATTACGTATATGCAGAGTGCGGCTAAGC
TTGTCGGGGCTGGCCGGGCTGGGAAGAAGGACGAGGACGAGGACGAGGAG
ATGACAGACCAGGAGTCGGAGGTGATTACTGTTCGGACAATTGAGGAGAT
TGCTGGTGTTGTTCCGGAAAGTGTATTGGATGCGTTGGTGCAGGCGATGC
AGCCGAAGAAGATCGGGTCCTCGTATGAGGCTGTTGCGAAGGTGGTTACG
GATATCATTGCTGATGGGTGGAGTGCAACGCAGCTTCTTTTACAGTTGTA
TCGACGGGTGGTGTTCAACGACGCGATCCCTGATATCCAGAAGAACAAAA
TCGTTATGGTGTTCTCGGATATGGATCGACGTCTGGTTGATGGTGCAGAC
GAGCATCTGTCTATCTTGGATGTGGCCCTTAAGATCTCTGGCATCCTGGG
AGGAGCTTAGATGGCTGCCAATTTCTTCAACAACAAGGCCCGCGCTGCTG
CGGCAGCAGCGAACCCTTCGAAGCCGAAGCCCACAGATAACAAGGAAGAA
CAAGCAAAGCAACAACCATGGGTTGAGAAATACCGTCCCAAGACCCTCGA
TGATGTCGCCGCCCAAGATCACACAACCAAAGTCCTTCAACGAACACTCC
AAGCTTCCAACCTCCCCCACATGCTCTTCTACGGACCCCCAGGTACCGGA
AAAACATCCACCATTCTCGCCCTCGCCAAATCCCTCTTCGGACCTTCCCT
CTACCGCTCGCGCATTCTGGAACTGAACGCCTCCGACGAACGAGGTATCG
GTATCGTGCGTGAAAAGATTAAGAACTTTGCCCGTGCTCAACTCACACAC
TCTACGGGGTTGGGTGAGGAATACTTGGCACAATACCCGTGCCCGCCATT
TAAGATTATTATTCTCGATGAGGCGGACAGCATGACGCAGGATGCGCAGT
CTGCGTTGCGTCGCACGATGGAGCAGTATAGTCGGATTACCCGTTTCTGC
TTAGTTTGCAACTACGTCACGCGAATCATTGAGCCGCTGGCGAGTCGATG
CAGCAAGTTTCGATTCAAGGCTTTGGATAACACGGCCGCTGGAGAGAGAT
TGGAACATATTGCCAAGGTGGAGAATCTAAGGTTGGAGGATGGAGTTGTG
GATAAGTTGATTGCTTGCAGTGAGGGTGATATGCGACGGGCGATTACGTA
TATGCAGAGTGCGGCTAAGCTTGTCGGGGCTGGCCGGGCTGGGAAGAAGG
ACGAGGACGAGGACGAGGAGATGACAGACCAGGAGTCGGAGGTGATTACT
GTTCGGACAATTGAGGAGATTGCTGGTGTTGTTCCGGAAAGTGTATTGGA
TGCGTTGGTGCAGGCGATGCAGCCGAAGAAGATCGGGTCCTCGTATGAGG
CTGTTGCGAAGGTGGTTACGGATATCATTGCTGATGGGTGGAGTGCAACG
CAGCTTCTTTTACAGTTGTATCGACGGGTGGTGTTCAACGACGCGATCCC
TGATATCCAGAAGAACAAAATCGTTATGGTGTTCTCGGATATGGATCGAC
GTCTGGTTGATGGTGCAGACGAGCATCTGTCTATCTTGGATGTGGCCCTT
AAGATCTCTGGCATCCTGGGAGGAGCTTAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0006260DNA replication
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO:0005524ATP binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_005620KJC3_005620Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005620-T1KJC3_005620-T1-proteinAspergillus niger KJC3polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005620-T1.utr5p1KJC3_005620-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005620-T1.exon1KJC3_005620-T1.exon1Aspergillus niger KJC3exon
KJC3_005620-T1.exon2KJC3_005620-T1.exon2Aspergillus niger KJC3exon
KJC3_005620-T1.exon3KJC3_005620-T1.exon3Aspergillus niger KJC3exon
KJC3_005620-T1.exon4KJC3_005620-T1.exon4Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005620-T1.cdsKJC3_005620-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005620-T1.utr3p1KJC3_005620-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR027417
DBxrefInterPro:IPR008921
DBxrefInterPro:IPR003959
DBxrefInterPro:IPR013748
DBxrefInterPro:IPR003593
DBxrefPFAM:PF08542
DBxrefPFAM:PF00004
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch4supercontigch4:3239659..3241338 +
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