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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:3267881..3270464+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_005631-T1 ID=KJC3_005631-T1|Name=KJC3_005631-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2584bp|location=Sequence derived from alignment at ch4:3267881..3270464+ (Aspergillus niger KJC3) ATTGATGTGAGGTGGCAGTATCTGAATTTATCTATTCATTCCATTATCAT
CGTCGGTAGTCGGCAAAGAGTGAGCATAGGCAACTCGGGCTCGACACTGA
CTTCCTATAGTAGAGAGTATGACAAGTCCGGTCCGTGCTACCATTGCGAG
ATAGGTCAGTCCACGAAAGCTAATAAAGCCCAGCATCAGATGTTATCATA
TCACGATATGACTGCTCAGGCGAGCCACACGGTATGGACAAGCTCCCCAG
TCTGAACTAGGATGGATCATCCGACTGATGTCACGTCATGGTAGGAAATG
CAACGTGCATCATCCGCAGTCAACTTCCGTTATACGCACTTCGCGATGCT
TTGCATTGACCACAATGGCGACCTTCGCATAGAAGCGTCACCGTCCATTG
CAGGCTGCGAAAAGGCGATCTTCACGGACGACGTGCAGGATCGATTTCTG
AAGTCAGTGACTACAGCATGGCAACCCAGCCTGCAGAGTCTCCATTCCAG
TAAGTGACTCGGCGAATGTAAAACGAGCCAGTCAAGGATGGAGTAGTAAC
GAGGACGCGTTCCTGCCCGAATTAGACACCTTGAGTCACATGAACGGCGA
TGTCACGGGAAAACCAATGCTTCTGTCCAGTCCTTCACTTGGCCTACAGC
ACGCCTGGTATCAACCAAGCCTCCCCCGACAGGCCGGACTCATTCCATGT
GAATGGCAATCATTGCAGAACAAGCGTCACAGACGTAGCTTGAGACACGA
ACTCTCGGGCATCGGGCTTGATTTAGATTCTGCTTCACCCACGCCGTCGC
TACGGCGCACAGCAATTCGGCTAGGGCAGACGGATCTTGTGCGACGATAC
TATGAGAAGGCATTCGAGGCATTTCAACAGCTGAACTGCAGGGTTATTGC
CAAGGCATTTGTAAAACTTGTGGAACCGCGCAAGCAGGTCAATCATCCAT
ACAATGGACGACGAGCTGCTGGAGGTTCATCACAGAAGATGGACTCCGAA
TTGACTAAGCCGAAATGGTGGCCTACTGGGGTGACACACAAAGAACCCGA
CCATCTTCAAAAGGCTGGTAAGATGGTCCTTGCTCTCTATCCGGTTGAAT
CATGAGATTTGAATACTCACTGGTCCCATCAATCTCACTAGAGAGAATCA
GGCTGCTTGTCCATATCCTGTGCGAATTGAAGGAGAGTCGAGGAATCACT
GCCGAGAAGCTCAAGGACGCTGGACAAGACGTGCGGCGTCAGATTCAGCC
CGAGAGCCGTCTACAGGTTCTAGACGAGATCTACTACGTTCGCTATATGG
AAGAATTATACATGGAGGGAAAGATTAGTATGCATCTGCTTCCACATTTT
TGTGGACTATAGCCACAGCCCAATACCAAGCGACTAACCATCTTCTATAG
GTGGGGACACAATGATCTACGTCTCGCATGTCCATCTCGATGAGGACTTC
TTGTTCGCTGAAATACGGGAGCAGACAACTAACAACTCTCGCGAACTGTC
GCTTCCGATTATGAACAACAAACCAGATGCCCCCAAAGGGACGGAGGGAA
GCAAGAGTCCAGGGGACCAGAGTGAAATACAGGCCGCCACGGACAAATCG
CACACTGATATGCCTGTGTCCTCCGACGAACGGCGCCTGCCACCAATGGA
GGTGAACCACCAAGCAAAACGCCCCGCCAATCAAGACTACTGTTATCCTC
CTTCGCCCGTATCCAGCCCCTCCATCAGTCGGAAGAGCTCCTTGGAGAGC
GGCCTATCTACATACTCAACAGACATGGCTGCACCGATGTTGTCAGGGAG
TGAACCCAACGGAGCACCTTGTGCCTCTAGGGATATCCATCCCGCCGAGG
CTTCATGCATGCCTGACTACTTTGGTAGCCAGCAAATGGCCACTTCATCT
GCTGAACAAAATCACCAGCCTGGATTTTGGAGCCTTCCCCCCGCCCATAC
GGCACTACCTTTTAATGGATACTGATCTGGGAAAATCGTTCAAATACGCA
CGGCGGGGACCCTTTTCGATGGACGTTTTGTAAATACTGGATGATCTCAG
ACATGCTGAGATCTGGGTCTCGTCCATTTACGCTTGCATTATCTCCTTTT
GTATCATTTTATCTTTTTTGGTGGGTTTCATTTTTCAGGAAGTGACGGGG
CCAAGAATACGTGGAGTTCAGCGGCACTATGGCTGGCGCAAGCGGCGGAT
CCATACTATTTGTGATATAGACAACTTGCTCCTGTATTATCTCATTTTCT
TGGACTGGGTGCAGTTTAGCGAGGAGGTGGTCATCAACTGTTCACTGACA
GTCAATATCATCTGTTGCATATAGGAGAATCAAACTAATATGAGATGGGA
AGCCTTTGGAGGCCACTTGTTATCAAGCTTTGTTGGGATGCTGCAATTAC
TACCGAACTGGATCCCTAGGAAATCAAATCACTTTTAATTTCCGCTTTAG
GCCCAACTTGGCGCCGCTTTCTACTCCCAGAGCAGCCCGGAGCGTGGGGT
AAGCACCAAAGTACGTGTCCTGAACAATCCCTGAGCGATCCCTAATTACT
CCGGGAAAAAATAACTGGAAAAAGTGACTGTCAC back to topCoding sequence (CDS) from alignment at ch4:3267881..3270464+ >KJC3_005631-T1 ID=KJC3_005631-T1|Name=KJC3_005631-T1|organism=Aspergillus niger KJC3|type=CDS|length=7500bp|location=Sequence derived from alignment at ch4:3267881..3270464+ (Aspergillus niger KJC3) ATGTTATCATATCACGATATGACTGCTCAGGCGAGCCACACGGAAATGCA ACGTGCATCATCCGCAGTCAACTTCCGTTATACGCACTTCGCGATGCTTT GCATTGACCACAATGGCGACCTTCGCATAGAAGCGTCACCGTCCATTGCA GGCTGCGAAAAGGCGATCTTCACGGACGACGTGCAGGATCGATTTCTGAA GTCAGTGACTACAGCATGGCAACCCAGCCTGCAGAGTCTCCATTCCAACA CCTTGAGTCACATGAACGGCGATGTCACGGGAAAACCAATGCTTCTGTCC AGTCCTTCACTTGGCCTACAGCACGCCTGGTATCAACCAAGCCTCCCCCG ACAGGCCGGACTCATTCCATGTGAATGGCAATCATTGCAGAACAAGCGTC ACAGACGTAGCTTGAGACACGAACTCTCGGGCATCGGGCTTGATTTAGAT TCTGCTTCACCCACGCCGTCGCTACGGCGCACAGCAATTCGGCTAGGGCA GACGGATCTTGTGCGACGATACTATGAGAAGGCATTCGAGGCATTTCAAC AGCTGAACTGCAGGGTTATTGCCAAGGCATTTGTAAAACTTGTGGAACCG CGCAAGCAGGTCAATCATCCATACAATGGACGACGAGCTGCTGGAGGTTC ATCACAGAAGATGGACTCCGAATTGACTAAGCCGAAATGGTGGCCTACTG GGGTGACACACAAAGAACCCGACCATCTTCAAAAGGCTGAGAGAATCAGG CTGCTTGTCCATATCCTGTGCGAATTGAAGGAGAGTCGAGGAATCACTGC CGAGAAGCTCAAGGACGCTGGACAAGACGTGCGGCGTCAGATTCAGCCCG AGAGCCGTCTACAGGTTCTAGACGAGATCTACTACGTTCGCTATATGGAA GAATTATACATGGAGGGAAAGATTAGTGGGGACACAATGATCTACGTCTC GCATGTCCATCTCGATGAGGACTTCTTGTTCGCTGAAATACGGGAGCAGA CAACTAACAACTCTCGCGAACTGTCGCTTCCGATTATGAACAACAAACCA GATGCCCCCAAAGGGACGGAGGGAAGCAAGAGTCCAGGGGACCAGAGTGA AATACAGGCCGCCACGGACAAATCGCACACTGATATGCCTGTGTCCTCCG ACGAACGGCGCCTGCCACCAATGGAGGTGAACCACCAAGCAAAACGCCCC GCCAATCAAGACTACTGTTATCCTCCTTCGCCCGTATCCAGCCCCTCCAT CAGTCGGAAGAGCTCCTTGGAGAGCGGCCTATCTACATACTCAACAGACA TGGCTGCACCGATGTTGTCAGGGAGTGAACCCAACGGAGCACCTTGTGCC TCTAGGGATATCCATCCCGCCGAGGCTTCATGCATGCCTGACTACTTTGG TAGCCAGCAAATGGCCACTTCATCTGCTGAACAAAATCACCAGCCTGGAT TTTGGAGCCTTCCCCCCGCCCATACGGCACTACCTTTTAATGGATACTGA ATGTTATCATATCACGATATGACTGCTCAGGCGAGCCACACGGAAATGCA ACGTGCATCATCCGCAGTCAACTTCCGTTATACGCACTTCGCGATGCTTT GCATTGACCACAATGGCGACCTTCGCATAGAAGCGTCACCGTCCATTGCA GGCTGCGAAAAGGCGATCTTCACGGACGACGTGCAGGATCGATTTCTGAA GTCAGTGACTACAGCATGGCAACCCAGCCTGCAGAGTCTCCATTCCAACA CCTTGAGTCACATGAACGGCGATGTCACGGGAAAACCAATGCTTCTGTCC AGTCCTTCACTTGGCCTACAGCACGCCTGGTATCAACCAAGCCTCCCCCG ACAGGCCGGACTCATTCCATGTGAATGGCAATCATTGCAGAACAAGCGTC ACAGACGTAGCTTGAGACACGAACTCTCGGGCATCGGGCTTGATTTAGAT TCTGCTTCACCCACGCCGTCGCTACGGCGCACAGCAATTCGGCTAGGGCA GACGGATCTTGTGCGACGATACTATGAGAAGGCATTCGAGGCATTTCAAC AGCTGAACTGCAGGGTTATTGCCAAGGCATTTGTAAAACTTGTGGAACCG CGCAAGCAGGTCAATCATCCATACAATGGACGACGAGCTGCTGGAGGTTC ATCACAGAAGATGGACTCCGAATTGACTAAGCCGAAATGGTGGCCTACTG GGGTGACACACAAAGAACCCGACCATCTTCAAAAGGCTGAGAGAATCAGG CTGCTTGTCCATATCCTGTGCGAATTGAAGGAGAGTCGAGGAATCACTGC CGAGAAGCTCAAGGACGCTGGACAAGACGTGCGGCGTCAGATTCAGCCCG AGAGCCGTCTACAGGTTCTAGACGAGATCTACTACGTTCGCTATATGGAA GAATTATACATGGAGGGAAAGATTAGTGGGGACACAATGATCTACGTCTC GCATGTCCATCTCGATGAGGACTTCTTGTTCGCTGAAATACGGGAGCAGA CAACTAACAACTCTCGCGAACTGTCGCTTCCGATTATGAACAACAAACCA GATGCCCCCAAAGGGACGGAGGGAAGCAAGAGTCCAGGGGACCAGAGTGA AATACAGGCCGCCACGGACAAATCGCACACTGATATGCCTGTGTCCTCCG ACGAACGGCGCCTGCCACCAATGGAGGTGAACCACCAAGCAAAACGCCCC GCCAATCAAGACTACTGTTATCCTCCTTCGCCCGTATCCAGCCCCTCCAT CAGTCGGAAGAGCTCCTTGGAGAGCGGCCTATCTACATACTCAACAGACA TGGCTGCACCGATGTTGTCAGGGAGTGAACCCAACGGAGCACCTTGTGCC TCTAGGGATATCCATCCCGCCGAGGCTTCATGCATGCCTGACTACTTTGG TAGCCAGCAAATGGCCACTTCATCTGCTGAACAAAATCACCAGCCTGGAT TTTGGAGCCTTCCCCCCGCCCATACGGCACTACCTTTTAATGGATACTGA ATGTTATCATATCACGATATGACTGCTCAGGCGAGCCACACGGAAATGCA ACGTGCATCATCCGCAGTCAACTTCCGTTATACGCACTTCGCGATGCTTT GCATTGACCACAATGGCGACCTTCGCATAGAAGCGTCACCGTCCATTGCA GGCTGCGAAAAGGCGATCTTCACGGACGACGTGCAGGATCGATTTCTGAA GTCAGTGACTACAGCATGGCAACCCAGCCTGCAGAGTCTCCATTCCAACA CCTTGAGTCACATGAACGGCGATGTCACGGGAAAACCAATGCTTCTGTCC AGTCCTTCACTTGGCCTACAGCACGCCTGGTATCAACCAAGCCTCCCCCG ACAGGCCGGACTCATTCCATGTGAATGGCAATCATTGCAGAACAAGCGTC ACAGACGTAGCTTGAGACACGAACTCTCGGGCATCGGGCTTGATTTAGAT TCTGCTTCACCCACGCCGTCGCTACGGCGCACAGCAATTCGGCTAGGGCA GACGGATCTTGTGCGACGATACTATGAGAAGGCATTCGAGGCATTTCAAC AGCTGAACTGCAGGGTTATTGCCAAGGCATTTGTAAAACTTGTGGAACCG CGCAAGCAGGTCAATCATCCATACAATGGACGACGAGCTGCTGGAGGTTC ATCACAGAAGATGGACTCCGAATTGACTAAGCCGAAATGGTGGCCTACTG GGGTGACACACAAAGAACCCGACCATCTTCAAAAGGCTGAGAGAATCAGG CTGCTTGTCCATATCCTGTGCGAATTGAAGGAGAGTCGAGGAATCACTGC CGAGAAGCTCAAGGACGCTGGACAAGACGTGCGGCGTCAGATTCAGCCCG AGAGCCGTCTACAGGTTCTAGACGAGATCTACTACGTTCGCTATATGGAA GAATTATACATGGAGGGAAAGATTAGTGGGGACACAATGATCTACGTCTC GCATGTCCATCTCGATGAGGACTTCTTGTTCGCTGAAATACGGGAGCAGA CAACTAACAACTCTCGCGAACTGTCGCTTCCGATTATGAACAACAAACCA GATGCCCCCAAAGGGACGGAGGGAAGCAAGAGTCCAGGGGACCAGAGTGA AATACAGGCCGCCACGGACAAATCGCACACTGATATGCCTGTGTCCTCCG ACGAACGGCGCCTGCCACCAATGGAGGTGAACCACCAAGCAAAACGCCCC GCCAATCAAGACTACTGTTATCCTCCTTCGCCCGTATCCAGCCCCTCCAT CAGTCGGAAGAGCTCCTTGGAGAGCGGCCTATCTACATACTCAACAGACA TGGCTGCACCGATGTTGTCAGGGAGTGAACCCAACGGAGCACCTTGTGCC TCTAGGGATATCCATCCCGCCGAGGCTTCATGCATGCCTGACTACTTTGG TAGCCAGCAAATGGCCACTTCATCTGCTGAACAAAATCACCAGCCTGGAT TTTGGAGCCTTCCCCCCGCCCATACGGCACTACCTTTTAATGGATACTGA ATGTTATCATATCACGATATGACTGCTCAGGCGAGCCACACGGAAATGCA ACGTGCATCATCCGCAGTCAACTTCCGTTATACGCACTTCGCGATGCTTT GCATTGACCACAATGGCGACCTTCGCATAGAAGCGTCACCGTCCATTGCA GGCTGCGAAAAGGCGATCTTCACGGACGACGTGCAGGATCGATTTCTGAA GTCAGTGACTACAGCATGGCAACCCAGCCTGCAGAGTCTCCATTCCAACA CCTTGAGTCACATGAACGGCGATGTCACGGGAAAACCAATGCTTCTGTCC AGTCCTTCACTTGGCCTACAGCACGCCTGGTATCAACCAAGCCTCCCCCG ACAGGCCGGACTCATTCCATGTGAATGGCAATCATTGCAGAACAAGCGTC ACAGACGTAGCTTGAGACACGAACTCTCGGGCATCGGGCTTGATTTAGAT TCTGCTTCACCCACGCCGTCGCTACGGCGCACAGCAATTCGGCTAGGGCA GACGGATCTTGTGCGACGATACTATGAGAAGGCATTCGAGGCATTTCAAC AGCTGAACTGCAGGGTTATTGCCAAGGCATTTGTAAAACTTGTGGAACCG CGCAAGCAGGTCAATCATCCATACAATGGACGACGAGCTGCTGGAGGTTC ATCACAGAAGATGGACTCCGAATTGACTAAGCCGAAATGGTGGCCTACTG GGGTGACACACAAAGAACCCGACCATCTTCAAAAGGCTGAGAGAATCAGG CTGCTTGTCCATATCCTGTGCGAATTGAAGGAGAGTCGAGGAATCACTGC CGAGAAGCTCAAGGACGCTGGACAAGACGTGCGGCGTCAGATTCAGCCCG AGAGCCGTCTACAGGTTCTAGACGAGATCTACTACGTTCGCTATATGGAA GAATTATACATGGAGGGAAAGATTAGTGGGGACACAATGATCTACGTCTC GCATGTCCATCTCGATGAGGACTTCTTGTTCGCTGAAATACGGGAGCAGA CAACTAACAACTCTCGCGAACTGTCGCTTCCGATTATGAACAACAAACCA GATGCCCCCAAAGGGACGGAGGGAAGCAAGAGTCCAGGGGACCAGAGTGA AATACAGGCCGCCACGGACAAATCGCACACTGATATGCCTGTGTCCTCCG ACGAACGGCGCCTGCCACCAATGGAGGTGAACCACCAAGCAAAACGCCCC GCCAATCAAGACTACTGTTATCCTCCTTCGCCCGTATCCAGCCCCTCCAT CAGTCGGAAGAGCTCCTTGGAGAGCGGCCTATCTACATACTCAACAGACA TGGCTGCACCGATGTTGTCAGGGAGTGAACCCAACGGAGCACCTTGTGCC TCTAGGGATATCCATCCCGCCGAGGCTTCATGCATGCCTGACTACTTTGG TAGCCAGCAAATGGCCACTTCATCTGCTGAACAAAATCACCAGCCTGGAT TTTGGAGCCTTCCCCCCGCCCATACGGCACTACCTTTTAATGGATACTGA ATGTTATCATATCACGATATGACTGCTCAGGCGAGCCACACGGAAATGCA ACGTGCATCATCCGCAGTCAACTTCCGTTATACGCACTTCGCGATGCTTT GCATTGACCACAATGGCGACCTTCGCATAGAAGCGTCACCGTCCATTGCA GGCTGCGAAAAGGCGATCTTCACGGACGACGTGCAGGATCGATTTCTGAA GTCAGTGACTACAGCATGGCAACCCAGCCTGCAGAGTCTCCATTCCAACA CCTTGAGTCACATGAACGGCGATGTCACGGGAAAACCAATGCTTCTGTCC AGTCCTTCACTTGGCCTACAGCACGCCTGGTATCAACCAAGCCTCCCCCG ACAGGCCGGACTCATTCCATGTGAATGGCAATCATTGCAGAACAAGCGTC ACAGACGTAGCTTGAGACACGAACTCTCGGGCATCGGGCTTGATTTAGAT TCTGCTTCACCCACGCCGTCGCTACGGCGCACAGCAATTCGGCTAGGGCA GACGGATCTTGTGCGACGATACTATGAGAAGGCATTCGAGGCATTTCAAC AGCTGAACTGCAGGGTTATTGCCAAGGCATTTGTAAAACTTGTGGAACCG CGCAAGCAGGTCAATCATCCATACAATGGACGACGAGCTGCTGGAGGTTC ATCACAGAAGATGGACTCCGAATTGACTAAGCCGAAATGGTGGCCTACTG GGGTGACACACAAAGAACCCGACCATCTTCAAAAGGCTGAGAGAATCAGG CTGCTTGTCCATATCCTGTGCGAATTGAAGGAGAGTCGAGGAATCACTGC CGAGAAGCTCAAGGACGCTGGACAAGACGTGCGGCGTCAGATTCAGCCCG AGAGCCGTCTACAGGTTCTAGACGAGATCTACTACGTTCGCTATATGGAA GAATTATACATGGAGGGAAAGATTAGTGGGGACACAATGATCTACGTCTC GCATGTCCATCTCGATGAGGACTTCTTGTTCGCTGAAATACGGGAGCAGA CAACTAACAACTCTCGCGAACTGTCGCTTCCGATTATGAACAACAAACCA GATGCCCCCAAAGGGACGGAGGGAAGCAAGAGTCCAGGGGACCAGAGTGA AATACAGGCCGCCACGGACAAATCGCACACTGATATGCCTGTGTCCTCCG ACGAACGGCGCCTGCCACCAATGGAGGTGAACCACCAAGCAAAACGCCCC GCCAATCAAGACTACTGTTATCCTCCTTCGCCCGTATCCAGCCCCTCCAT CAGTCGGAAGAGCTCCTTGGAGAGCGGCCTATCTACATACTCAACAGACA TGGCTGCACCGATGTTGTCAGGGAGTGAACCCAACGGAGCACCTTGTGCC TCTAGGGATATCCATCCCGCCGAGGCTTCATGCATGCCTGACTACTTTGG TAGCCAGCAAATGGCCACTTCATCTGCTGAACAAAATCACCAGCCTGGAT TTTGGAGCCTTCCCCCCGCCCATACGGCACTACCTTTTAATGGATACTGA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type |
KJC3_005631-T1.utr3p1 | KJC3_005631-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
Property Name | Value |
DBxref | InterPro:IPR021264 |
DBxref | PFAM:PF11001 |
Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
ch4 | supercontig | ch4:3267881..3270464 + |
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