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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:3303947..3306458+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_005642-T1 ID=KJC3_005642-T1|Name=KJC3_005642-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2512bp|location=Sequence derived from alignment at ch4:3303947..3306458+ (Aspergillus niger KJC3)
GCTTCTGCTCCCCCATTTTCCCACACCATCTTCGGTGATCCAACTTGAAC
TTCTTTTCTCTTCCCACCCCTACGACTTTTGAAGTCTTTGTGATATCTCT
CATCCCCGAGAGTTGTGCTGCCAGGTTCGTTGCTCTCTTCCCAGTGTTTC
TCTGCGCATTGCGCCTTCCCCCACCATCCTCGCCTATCGCTAACAAGCCT
TTTCCAGTTTTACTCCCAAAACCCCACCGTCTTCGATCACAGCATCTCGC
CTGTGATCTTTTCTCAACAACACCGCAATCATGGCTTCTAACGACAAGGG
CTTGGAGGAGATCCCCGAGGGTATGTGCTACTAAAACATCTTTTGCTTTA
TGCTTTTTTTTTTCTTTTCCTACAAAAGCGAGTTTGTGGTTTTTATCGAT
CACTTTGCTGGAGATTGGGGCTCGCTCCCAAGTCAGCAGAGGAAAGAGAG
ATAACCGCCACATTCCATCATCGGAACATCTTTCAAAAGAAACAAGCTGA
CCAGAAACTTCACCTCAATAGGACAGATCGAGACTAACTACGATGAGGTT
ACCGACTCTTTCGACTCCATGGACCTGAAGCCCGAGCTGCTTCGCGGTAT
GTGATACAAATTTTATCATCGCCCTGGTGGGGTCTGTGCCAACATGTTCT
GACGACGTCCAGGTGTCTACGCCTACGGTTTTGAGCGTCCCTCCGCTATC
CAGCAGCGTGCCATCAAGCCCATCATTGCCGGTACGTCTCCCCCCCGCGC
GATCGCCTATAATCTATGATGCTAACTAGAGCATCCCAGGCCACGATGTC
ATTGCTCAGGCTCAGTCTGGTACCGGAAAGACTGCCACTTTCTCCATCTC
CGCTCTCCAGAAGATTGACCAGGAGCTCAAGGCTTGCCAGGCTCTGATTG
TCGCTCCCACCCGTGAGTTGGCTCAGCAGATCCAGAAGGTCGTTGTTGCC
ATTGGTGACTTCATGAACATTGAGTGCCACGCCTGCATTGGTGGTACCAA
CGTCCGTGACGACATGAACGCCCTCCGCGCCGGCCCCCAGGTCGTTGTCG
GTACCCCCGGTCGTATCCACGATATGATTGAGCGCCGTGTCCTCAAGACC
GACCAGATGAAGCTCTTCATCCTCGACGAGGCTGATGAGATGCTTTCTGT
AAGTCCATACCAGATCTGGGCCCAGGGAAGACGTGCCTTTGCTAATAAAT
GTGATTAGCGTGGTTTCACCGAGCAAATCTACGACATCTTCCAGCTCCTC
CCCCAGTCTACCCAGGTCACCCTGCTGTCCGCTACCATGCCCCAGGATGT
CCTTGAGGTCACCACCAAGTTCATGCGTGACCCCATCCGTATCCTGGTCA
AGAAGCAGGAGCTTACCCTTGAGGGTATCAAGCAGTTCTACATTGCTGTT
GAGAAGGAGGAGTGGAAGCTCGACACCCTCTCCGATCTCTACGAGACCGT
CACCATTACCCAGGCCGTCATCTTCTGTAACACCCGCCGCAAGGTCGACT
GGCTCACTGACAAGCTCACTGCCCGTGACTTCACCGTCTCTGCCATGCAC
GGTGACATGGAGCAGGGCCAGCGTGATGTTATCATGAAGGAGTTCCGTTC
CGGATCTTCCCGTGTCCTGATCGCCACTGACCTTCTGGCCCGTGGTATCG
ATGTCCAGCAGGTCTCCCTGGTCATCAACTACGACCTTCCCGCCAACCGT
GAGAACTACATCCACCGTATCGGTCGTGGTGGTCGTTTCGGTCGTAAGGG
TGTTGCCATCAACTTCGTCACCGCTGACGATGTCCGCATGATGCGTGAGA
TTGAGCAGTTCTACAGCACCCAGATCGAGGAGATGCCCATGAACGTTGCT
GGTAAGCTAGCCTTCACCCACACTCTGATTATCGTATCTTCCATACTGAT
TTTTGGTTCCAGACCTCATCTAAACACCCTAATACCATCACCTAACGTCC
CTCGATGCGGATTACGAATGCAGTTGCCAATAACGCTCCAAGGGTGAGCT
GCGGTGGGAAAGACGTTTTGACATCGTTGCGCTTCTCTTGGTAAAGGAGA
ATCCTTCAAAAAGTGGCTTTCTGTGTCTCCAGCATTTTCTCTTTCAGCAG
TGGCGAGCGGGAACCGTCTAATCTACGTGTTTCTGTCTTGTGCTGTTTAT
GGTTTCCTTTGTCTGTTATTGCTTATGGAGATGCGACACGCTTGTGCGAT
TTTATTGCTGTAATTCATGGTTCTCTTCCGGAAACGCTTTTTCACACCCT
TTTTCCTTTGCTCTGTACCTAGCTCGCTCTCTGGTTGGTTAAGGATGCTG
CGTTCATACTTGACCAAGAGGTCGGGCCAAAAATGTGATTAGTTCAATCA
GGCTTTCTTTTCCTCGAGGCACTTTGGGTGGACGAAGATATGATTATGGC
TCGGACTGGTTGTATACCTGTGTTCACTAGTATAGACAAGAGAGGTACAT
ACCATTCCATTAGTTTGTTTTGAATAGTCAATCTTCAACTCCTGGTTTTG
TGGAACACGCGG back to topCoding sequence (CDS) from alignment at ch4:3303947..3306458+ >KJC3_005642-T1 ID=KJC3_005642-T1|Name=KJC3_005642-T1|organism=Aspergillus niger KJC3|type=CDS|length=7182bp|location=Sequence derived from alignment at ch4:3303947..3306458+ (Aspergillus niger KJC3)
ATGGCTTCTAACGACAAGGGCTTGGAGGAGATCCCCGAGGGACAGATCGA
GACTAACTACGATGAGGTTACCGACTCTTTCGACTCCATGGACCTGAAGC
CCGAGCTGCTTCGCGGTGTCTACGCCTACGGTTTTGAGCGTCCCTCCGCT
ATCCAGCAGCGTGCCATCAAGCCCATCATTGCCGGCCACGATGTCATTGC
TCAGGCTCAGTCTGGTACCGGAAAGACTGCCACTTTCTCCATCTCCGCTC
TCCAGAAGATTGACCAGGAGCTCAAGGCTTGCCAGGCTCTGATTGTCGCT
CCCACCCGTGAGTTGGCTCAGCAGATCCAGAAGGTCGTTGTTGCCATTGG
TGACTTCATGAACATTGAGTGCCACGCCTGCATTGGTGGTACCAACGTCC
GTGACGACATGAACGCCCTCCGCGCCGGCCCCCAGGTCGTTGTCGGTACC
CCCGGTCGTATCCACGATATGATTGAGCGCCGTGTCCTCAAGACCGACCA
GATGAAGCTCTTCATCCTCGACGAGGCTGATGAGATGCTTTCTCGTGGTT
TCACCGAGCAAATCTACGACATCTTCCAGCTCCTCCCCCAGTCTACCCAG
GTCACCCTGCTGTCCGCTACCATGCCCCAGGATGTCCTTGAGGTCACCAC
CAAGTTCATGCGTGACCCCATCCGTATCCTGGTCAAGAAGCAGGAGCTTA
CCCTTGAGGGTATCAAGCAGTTCTACATTGCTGTTGAGAAGGAGGAGTGG
AAGCTCGACACCCTCTCCGATCTCTACGAGACCGTCACCATTACCCAGGC
CGTCATCTTCTGTAACACCCGCCGCAAGGTCGACTGGCTCACTGACAAGC
TCACTGCCCGTGACTTCACCGTCTCTGCCATGCACGGTGACATGGAGCAG
GGCCAGCGTGATGTTATCATGAAGGAGTTCCGTTCCGGATCTTCCCGTGT
CCTGATCGCCACTGACCTTCTGGCCCGTGGTATCGATGTCCAGCAGGTCT
CCCTGGTCATCAACTACGACCTTCCCGCCAACCGTGAGAACTACATCCAC
CGTATCGGTCGTGGTGGTCGTTTCGGTCGTAAGGGTGTTGCCATCAACTT
CGTCACCGCTGACGATGTCCGCATGATGCGTGAGATTGAGCAGTTCTACA
GCACCCAGATCGAGGAGATGCCCATGAACGTTGCTGACCTCATCTAAATG
GCTTCTAACGACAAGGGCTTGGAGGAGATCCCCGAGGGACAGATCGAGAC
TAACTACGATGAGGTTACCGACTCTTTCGACTCCATGGACCTGAAGCCCG
AGCTGCTTCGCGGTGTCTACGCCTACGGTTTTGAGCGTCCCTCCGCTATC
CAGCAGCGTGCCATCAAGCCCATCATTGCCGGCCACGATGTCATTGCTCA
GGCTCAGTCTGGTACCGGAAAGACTGCCACTTTCTCCATCTCCGCTCTCC
AGAAGATTGACCAGGAGCTCAAGGCTTGCCAGGCTCTGATTGTCGCTCCC
ACCCGTGAGTTGGCTCAGCAGATCCAGAAGGTCGTTGTTGCCATTGGTGA
CTTCATGAACATTGAGTGCCACGCCTGCATTGGTGGTACCAACGTCCGTG
ACGACATGAACGCCCTCCGCGCCGGCCCCCAGGTCGTTGTCGGTACCCCC
GGTCGTATCCACGATATGATTGAGCGCCGTGTCCTCAAGACCGACCAGAT
GAAGCTCTTCATCCTCGACGAGGCTGATGAGATGCTTTCTCGTGGTTTCA
CCGAGCAAATCTACGACATCTTCCAGCTCCTCCCCCAGTCTACCCAGGTC
ACCCTGCTGTCCGCTACCATGCCCCAGGATGTCCTTGAGGTCACCACCAA
GTTCATGCGTGACCCCATCCGTATCCTGGTCAAGAAGCAGGAGCTTACCC
TTGAGGGTATCAAGCAGTTCTACATTGCTGTTGAGAAGGAGGAGTGGAAG
CTCGACACCCTCTCCGATCTCTACGAGACCGTCACCATTACCCAGGCCGT
CATCTTCTGTAACACCCGCCGCAAGGTCGACTGGCTCACTGACAAGCTCA
CTGCCCGTGACTTCACCGTCTCTGCCATGCACGGTGACATGGAGCAGGGC
CAGCGTGATGTTATCATGAAGGAGTTCCGTTCCGGATCTTCCCGTGTCCT
GATCGCCACTGACCTTCTGGCCCGTGGTATCGATGTCCAGCAGGTCTCCC
TGGTCATCAACTACGACCTTCCCGCCAACCGTGAGAACTACATCCACCGT
ATCGGTCGTGGTGGTCGTTTCGGTCGTAAGGGTGTTGCCATCAACTTCGT
CACCGCTGACGATGTCCGCATGATGCGTGAGATTGAGCAGTTCTACAGCA
CCCAGATCGAGGAGATGCCCATGAACGTTGCTGACCTCATCTAAATGGCT
TCTAACGACAAGGGCTTGGAGGAGATCCCCGAGGGACAGATCGAGACTAA
CTACGATGAGGTTACCGACTCTTTCGACTCCATGGACCTGAAGCCCGAGC
TGCTTCGCGGTGTCTACGCCTACGGTTTTGAGCGTCCCTCCGCTATCCAG
CAGCGTGCCATCAAGCCCATCATTGCCGGCCACGATGTCATTGCTCAGGC
TCAGTCTGGTACCGGAAAGACTGCCACTTTCTCCATCTCCGCTCTCCAGA
AGATTGACCAGGAGCTCAAGGCTTGCCAGGCTCTGATTGTCGCTCCCACC
CGTGAGTTGGCTCAGCAGATCCAGAAGGTCGTTGTTGCCATTGGTGACTT
CATGAACATTGAGTGCCACGCCTGCATTGGTGGTACCAACGTCCGTGACG
ACATGAACGCCCTCCGCGCCGGCCCCCAGGTCGTTGTCGGTACCCCCGGT
CGTATCCACGATATGATTGAGCGCCGTGTCCTCAAGACCGACCAGATGAA
GCTCTTCATCCTCGACGAGGCTGATGAGATGCTTTCTCGTGGTTTCACCG
AGCAAATCTACGACATCTTCCAGCTCCTCCCCCAGTCTACCCAGGTCACC
CTGCTGTCCGCTACCATGCCCCAGGATGTCCTTGAGGTCACCACCAAGTT
CATGCGTGACCCCATCCGTATCCTGGTCAAGAAGCAGGAGCTTACCCTTG
AGGGTATCAAGCAGTTCTACATTGCTGTTGAGAAGGAGGAGTGGAAGCTC
GACACCCTCTCCGATCTCTACGAGACCGTCACCATTACCCAGGCCGTCAT
CTTCTGTAACACCCGCCGCAAGGTCGACTGGCTCACTGACAAGCTCACTG
CCCGTGACTTCACCGTCTCTGCCATGCACGGTGACATGGAGCAGGGCCAG
CGTGATGTTATCATGAAGGAGTTCCGTTCCGGATCTTCCCGTGTCCTGAT
CGCCACTGACCTTCTGGCCCGTGGTATCGATGTCCAGCAGGTCTCCCTGG
TCATCAACTACGACCTTCCCGCCAACCGTGAGAACTACATCCACCGTATC
GGTCGTGGTGGTCGTTTCGGTCGTAAGGGTGTTGCCATCAACTTCGTCAC
CGCTGACGATGTCCGCATGATGCGTGAGATTGAGCAGTTCTACAGCACCC
AGATCGAGGAGATGCCCATGAACGTTGCTGACCTCATCTAAATGGCTTCT
AACGACAAGGGCTTGGAGGAGATCCCCGAGGGACAGATCGAGACTAACTA
CGATGAGGTTACCGACTCTTTCGACTCCATGGACCTGAAGCCCGAGCTGC
TTCGCGGTGTCTACGCCTACGGTTTTGAGCGTCCCTCCGCTATCCAGCAG
CGTGCCATCAAGCCCATCATTGCCGGCCACGATGTCATTGCTCAGGCTCA
GTCTGGTACCGGAAAGACTGCCACTTTCTCCATCTCCGCTCTCCAGAAGA
TTGACCAGGAGCTCAAGGCTTGCCAGGCTCTGATTGTCGCTCCCACCCGT
GAGTTGGCTCAGCAGATCCAGAAGGTCGTTGTTGCCATTGGTGACTTCAT
GAACATTGAGTGCCACGCCTGCATTGGTGGTACCAACGTCCGTGACGACA
TGAACGCCCTCCGCGCCGGCCCCCAGGTCGTTGTCGGTACCCCCGGTCGT
ATCCACGATATGATTGAGCGCCGTGTCCTCAAGACCGACCAGATGAAGCT
CTTCATCCTCGACGAGGCTGATGAGATGCTTTCTCGTGGTTTCACCGAGC
AAATCTACGACATCTTCCAGCTCCTCCCCCAGTCTACCCAGGTCACCCTG
CTGTCCGCTACCATGCCCCAGGATGTCCTTGAGGTCACCACCAAGTTCAT
GCGTGACCCCATCCGTATCCTGGTCAAGAAGCAGGAGCTTACCCTTGAGG
GTATCAAGCAGTTCTACATTGCTGTTGAGAAGGAGGAGTGGAAGCTCGAC
ACCCTCTCCGATCTCTACGAGACCGTCACCATTACCCAGGCCGTCATCTT
CTGTAACACCCGCCGCAAGGTCGACTGGCTCACTGACAAGCTCACTGCCC
GTGACTTCACCGTCTCTGCCATGCACGGTGACATGGAGCAGGGCCAGCGT
GATGTTATCATGAAGGAGTTCCGTTCCGGATCTTCCCGTGTCCTGATCGC
CACTGACCTTCTGGCCCGTGGTATCGATGTCCAGCAGGTCTCCCTGGTCA
TCAACTACGACCTTCCCGCCAACCGTGAGAACTACATCCACCGTATCGGT
CGTGGTGGTCGTTTCGGTCGTAAGGGTGTTGCCATCAACTTCGTCACCGC
TGACGATGTCCGCATGATGCGTGAGATTGAGCAGTTCTACAGCACCCAGA
TCGAGGAGATGCCCATGAACGTTGCTGACCTCATCTAAATGGCTTCTAAC
GACAAGGGCTTGGAGGAGATCCCCGAGGGACAGATCGAGACTAACTACGA
TGAGGTTACCGACTCTTTCGACTCCATGGACCTGAAGCCCGAGCTGCTTC
GCGGTGTCTACGCCTACGGTTTTGAGCGTCCCTCCGCTATCCAGCAGCGT
GCCATCAAGCCCATCATTGCCGGCCACGATGTCATTGCTCAGGCTCAGTC
TGGTACCGGAAAGACTGCCACTTTCTCCATCTCCGCTCTCCAGAAGATTG
ACCAGGAGCTCAAGGCTTGCCAGGCTCTGATTGTCGCTCCCACCCGTGAG
TTGGCTCAGCAGATCCAGAAGGTCGTTGTTGCCATTGGTGACTTCATGAA
CATTGAGTGCCACGCCTGCATTGGTGGTACCAACGTCCGTGACGACATGA
ACGCCCTCCGCGCCGGCCCCCAGGTCGTTGTCGGTACCCCCGGTCGTATC
CACGATATGATTGAGCGCCGTGTCCTCAAGACCGACCAGATGAAGCTCTT
CATCCTCGACGAGGCTGATGAGATGCTTTCTCGTGGTTTCACCGAGCAAA
TCTACGACATCTTCCAGCTCCTCCCCCAGTCTACCCAGGTCACCCTGCTG
TCCGCTACCATGCCCCAGGATGTCCTTGAGGTCACCACCAAGTTCATGCG
TGACCCCATCCGTATCCTGGTCAAGAAGCAGGAGCTTACCCTTGAGGGTA
TCAAGCAGTTCTACATTGCTGTTGAGAAGGAGGAGTGGAAGCTCGACACC
CTCTCCGATCTCTACGAGACCGTCACCATTACCCAGGCCGTCATCTTCTG
TAACACCCGCCGCAAGGTCGACTGGCTCACTGACAAGCTCACTGCCCGTG
ACTTCACCGTCTCTGCCATGCACGGTGACATGGAGCAGGGCCAGCGTGAT
GTTATCATGAAGGAGTTCCGTTCCGGATCTTCCCGTGTCCTGATCGCCAC
TGACCTTCTGGCCCGTGGTATCGATGTCCAGCAGGTCTCCCTGGTCATCA
ACTACGACCTTCCCGCCAACCGTGAGAACTACATCCACCGTATCGGTCGT
GGTGGTCGTTTCGGTCGTAAGGGTGTTGCCATCAACTTCGTCACCGCTGA
CGATGTCCGCATGATGCGTGAGATTGAGCAGTTCTACAGCACCCAGATCG
AGGAGATGCCCATGAACGTTGCTGACCTCATCTAAATGGCTTCTAACGAC
AAGGGCTTGGAGGAGATCCCCGAGGGACAGATCGAGACTAACTACGATGA
GGTTACCGACTCTTTCGACTCCATGGACCTGAAGCCCGAGCTGCTTCGCG
GTGTCTACGCCTACGGTTTTGAGCGTCCCTCCGCTATCCAGCAGCGTGCC
ATCAAGCCCATCATTGCCGGCCACGATGTCATTGCTCAGGCTCAGTCTGG
TACCGGAAAGACTGCCACTTTCTCCATCTCCGCTCTCCAGAAGATTGACC
AGGAGCTCAAGGCTTGCCAGGCTCTGATTGTCGCTCCCACCCGTGAGTTG
GCTCAGCAGATCCAGAAGGTCGTTGTTGCCATTGGTGACTTCATGAACAT
TGAGTGCCACGCCTGCATTGGTGGTACCAACGTCCGTGACGACATGAACG
CCCTCCGCGCCGGCCCCCAGGTCGTTGTCGGTACCCCCGGTCGTATCCAC
GATATGATTGAGCGCCGTGTCCTCAAGACCGACCAGATGAAGCTCTTCAT
CCTCGACGAGGCTGATGAGATGCTTTCTCGTGGTTTCACCGAGCAAATCT
ACGACATCTTCCAGCTCCTCCCCCAGTCTACCCAGGTCACCCTGCTGTCC
GCTACCATGCCCCAGGATGTCCTTGAGGTCACCACCAAGTTCATGCGTGA
CCCCATCCGTATCCTGGTCAAGAAGCAGGAGCTTACCCTTGAGGGTATCA
AGCAGTTCTACATTGCTGTTGAGAAGGAGGAGTGGAAGCTCGACACCCTC
TCCGATCTCTACGAGACCGTCACCATTACCCAGGCCGTCATCTTCTGTAA
CACCCGCCGCAAGGTCGACTGGCTCACTGACAAGCTCACTGCCCGTGACT
TCACCGTCTCTGCCATGCACGGTGACATGGAGCAGGGCCAGCGTGATGTT
ATCATGAAGGAGTTCCGTTCCGGATCTTCCCGTGTCCTGATCGCCACTGA
CCTTCTGGCCCGTGGTATCGATGTCCAGCAGGTCTCCCTGGTCATCAACT
ACGACCTTCCCGCCAACCGTGAGAACTACATCCACCGTATCGGTCGTGGT
GGTCGTTTCGGTCGTAAGGGTGTTGCCATCAACTTCGTCACCGCTGACGA
TGTCCGCATGATGCGTGAGATTGAGCAGTTCTACAGCACCCAGATCGAGG
AGATGCCCATGAACGTTGCTGACCTCATCTAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003676 | nucleic acid binding |
| GO:0005524 | ATP binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_005642-T1.utr3p1 | KJC3_005642-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR027417 |
| DBxref | InterPro:IPR014014 |
| DBxref | InterPro:IPR000629 |
| DBxref | InterPro:IPR011545 |
| DBxref | InterPro:IPR014001 |
| DBxref | InterPro:IPR001650 |
| DBxref | PFAM:PF04851 |
| DBxref | PFAM:PF00271 |
| DBxref | PFAM:PF00270 |
| Product | translation initiation factor eIF4A |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch4 | supercontig | ch4:3303947..3306458 + |
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