You are here

Home

KJC3_005645-T1, KJC3_005645-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_005645-T1
Unique NameKJC3_005645-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch4:3308912..3309777+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_005645-T1 ID=KJC3_005645-T1|Name=KJC3_005645-T1|organism=Aspergillus niger KJC3|type=mRNA|length=866bp|location=Sequence derived from alignment at ch4:3308912..3309777+ (Aspergillus niger KJC3)
ATTTGTGTAAACAATTATTTGTCTGGAATTGTCAGTAGAGACCGTGATGA
GCTGAGAATGTTTTCTTATTCTCGTTGTTCCTTACGTCACCCGCTCAGTT
CATGAAGGGTGCTTCTATCACTGCATGTCAACTACACTCTTTGCACTGCG
TCTGTACATAATCATCCGAGTTGAATTTGAAGAGCAGGGCGTCTTGCCAG
TACAGTCTATTATATTAGTTGCAGAATATCGTTCATCTCTCCAGTGATCT
GAACCAAAATCGCCATGCAAGTAGCTGAGATCCTCTCCGATCTGACATCC
CTACGCGTCTGTGTAAGTCCTCCTTGCCATGACGCTCAACCAGTTTCTCA
GCCTTCTTCTCCTTCTATATAGTGGAACAATATAAACACTCGTCTCCAAT
ACAACGTTCTGACTACCTCATCGTCAAAAAACCAACTCAACTAATATCCA
ACCACAGGACCACCATGACGCCCTCGCGCTCGTTACTGTTAATGAGAGAA
TACCCCATATTACAGCGCAACTAGGACTCAAAGCAACGAGCACAAGCCAA
GCAAGCTCTGGAGCAGATTTGAGTCGCTACGAAAACGAGGACCTCAGTCG
CGCAAAGGAGCTCGTCGACTTGCACTACGAGTTCAAGGCCCGTCATGCAT
TAGGCACGGTTGATGAGGAGCTTGCGCGTGCAAGGGAAGAAGTAGGCCGA
GTGTTAAGGGAACTAAGCTAGTTAAGAATAATAGCTACCTGGCTTTGACG
TTATTTTGTTGTTTGCGAATTCTACCTTTCATGCATCTGGACGTTTTATT
TGGGCTGGCGTTATCGGTGAAGGGCTGTATGTTGATGTCACTCCGAGGTA
ATAATATCATATAAAC
back to top

Coding sequence (CDS) from alignment at ch4:3308912..3309777+

>KJC3_005645-T1 ID=KJC3_005645-T1|Name=KJC3_005645-T1|organism=Aspergillus niger KJC3|type=CDS|length=624bp|location=Sequence derived from alignment at ch4:3308912..3309777+ (Aspergillus niger KJC3)
ATGCAAGTAGCTGAGATCCTCTCCGATCTGACATCCCTACGCGTCTGTGA
CCACCATGACGCCCTCGCGCTCGTTACTGTTAATGAGAGAATACCCCATA
TTACAGCGCAACTAGGACTCAAAGCAACGAGCACAAGCCAAGCAAGCTCT
GGAGCAGATTTGAGTCGCTACGAAAACGAGGACCTCAGTCGCGCAAAGGA
GCTCGTCGACTTGCACTACGAGTTCAAGGCCCGTCATGCATTAGGCACGG
TTGATGAGGAGCTTGCGCGTGCAAGGGAAGAAGTAGGCCGAGTGTTAAGG
GAACTAAGCTAGATGCAAGTAGCTGAGATCCTCTCCGATCTGACATCCCT
ACGCGTCTGTGACCACCATGACGCCCTCGCGCTCGTTACTGTTAATGAGA
GAATACCCCATATTACAGCGCAACTAGGACTCAAAGCAACGAGCACAAGC
CAAGCAAGCTCTGGAGCAGATTTGAGTCGCTACGAAAACGAGGACCTCAG
TCGCGCAAAGGAGCTCGTCGACTTGCACTACGAGTTCAAGGCCCGTCATG
CATTAGGCACGGTTGATGAGGAGCTTGCGCGTGCAAGGGAAGAAGTAGGC
CGAGTGTTAAGGGAACTAAGCTAG
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_005645KJC3_005645Aspergillus niger KJC3gene


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005645-T1.utr5p1KJC3_005645-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005645-T1.exon1KJC3_005645-T1.exon1Aspergillus niger KJC3exon
KJC3_005645-T1.exon2KJC3_005645-T1.exon2Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005645-T1.cdsKJC3_005645-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005645-T1.utr3p1KJC3_005645-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005645-T1KJC3_005645-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch4supercontigch4:3308912..3309777 +
Powered by Drupal