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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:3313336..3315619+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_005647-T2 ID=KJC3_005647-T2|Name=KJC3_005647-T2|organism=Aspergillus niger KJC3|type=mRNA|length=2284bp|location=Sequence derived from alignment at ch4:3313336..3315619+ (Aspergillus niger KJC3) ACCCAAACCGCAGTCTCGTGGCTGGCTCATCACCGCAGCTGTTCACGCGC
CGGTCGCTGCACATATTGTCGACTCCTCAATAGCTGTTGGTTCTCTCGGA
CTAGGACTAGAAACCATGGCGACGAGTGTGGATGCCAAACTGCTGAAGCA
GACCAAATTCCCTCCGGAATTCAGCCGGAAGGTGGATATGACCAAGGTCA
ACATCGAGGTGATGAAGAAGTGCGTTGCAAAAGCCCCAGCTAAGTTTCTT
ATCGCGAGGTGCTGTTATCATCCGGATCTGGAACTAACATTTTGACTATT
GCAGATGGATTGCTGGGAAGATCTCCGAGATTCTGGGAAATGAAGATGAC
GTCGTTATTGAGCTCTGCTTTAACCTTTTGGAAGGGTCGCGGTTTGTATG
TACGACCTTTTACCTTTTGCCTTTAATGCTGATTTGCTATGTTTTACTCG
GGGTTCAGCCATTCAAGCTAACTGGTTTCACTTTGCATTATCTCAGCCCG
ATATCAAGTCCCTGCAGATTCAGCTCACCGGATTCCTGGATAAAGATACT
GGCAAGTTTTGCAAAGAGCTGTGGTCGCTATGCTTGAGTGCCCAGGAAAA
CCCCCAGGGCGTGCCCAAGGAGTTGCTGGAGGCGAAGAAACTGGAGCTTA
TCCAAGAGAAGGTGGGATGCCTCGCGGATGTCTGGGTTGTTGGTCGCATG
CTGACGCCTTCGTTATTTAGATCGAAGCGGAAAGAGCCGCCGAGGAAGCC
CGCAAACAGAAGGAACAGGAGCGCGCACGAGAACGAGAACTTGAAGACCT
TCGACGCAGAGAACGGTCTGAGCGCACAAGGGGAGGAAGAAGAGGCGGTG
GTCGCGGTGGTCGAGACTTTGATAGGCGTCGGTCGCCTCCGCGACAACGC
AGCCGTGACCGTTTTCGAGGTCCGCCTGGCAGACGAGAGTTCGATTCCTA
CGTGCCCTCAGGCTCTCGTCGAGGCCGTCGGCCATCCCGTTCGCCCAGCC
GCTCTCGTTCTCGCTCCGTGTCTTCCTCGCGCTCACCCCCACCACGTCGG
CGCCATCCTGGCAACGACCGGAACCGACGACGTCGGTCGATTAGCGGCTC
TGTCTCCCCGGACCGCGGTGATCGCAGGAGGCCCAGGAGACGCAGCCCTG
ATTACGGTGATCGTGCAAGATCCATTACCCGCAGTGAATCATCACGCTCA
CGTAGTCCCAGAAGAGACCGACGGAGACGGAGATCCGTTTCTTCCCGCAG
TGCATCGCGTTCACCTGTCTACAGGGATCGACGCAAGAGGAGAGGTTCTT
CAGCATCGAGGTCCCGTTCGAGGTCGCAAGGGTCGGATGGTAGCGGCACC
AGACGCAGAGGATCATCGCCTCACTCTTCACGAGATGATAAGAAAGAATC
CACCGCTGATATTGCAAAGGCCCGCAAGTCCCGTGACGACCGCCGTTTGA
GTCGCAGCAGAGATCGCAATGACACCCGCAGACGCCGGTACTCGTCCCAG
AGTGTTAGCCGCAGCCGCAGTCGAGGTCGCTCCCGCAGCGCCAGCCAGGA
CTCCCGCAGTCGGAGTCGCAGCCGCAGCCACAGCCGCATGAGAGATAGGA
AGCGGCGTCGGTCCATTGAGAGATATGCCCCAGTTGCGCGGAGACGGCGC
AACACGTCCTCCGTATCCGTCCCCAGTGATAAACGAAAGAGGATGGCTGA
TGAAGACGAGGATGCCGCCAAACGATCACCACCGCAGGCTGAGAAGCCGA
GCTCGAGCGACCAAGAGATGAAGGATGCCACTGAGGTGGGTGAATGATTT
CTGAGGGTCCTCTTCACACAAATTCTATGATTTCCTAAGTTCGTTCAACG
CCCAAACAAACCCTGCATTGCTCCTCTCACCGTACAGACCTAAACTAACC
ACCTGATCGCAGACTGCTGCTCCCTCCAATAACCCAGCTCGTGTACGCAT
CTCCAGCTCCGAACTACGCGAGAAGCTGCTCCGCGAGAAGATCATCGCGA
TGCGCCGGACCGCCTCGAGCGACAAGGTAGGTAGCTCTGCATCTTCAAGG
TAGTCTACATGCCCTACCATTCAGGGCGCACACACACACACACAGCTTCA
CCTACATAAACCCACATACCAAAGTCCCACTAAAAGAGCGAAGGATTGGA
GGATTCCGCAACTCAATACTTAGCGATCTATGCACACGTGGTAATGTCAC
TATAAACAATAAACAAAAAGAGAGTTTGCATCCTATGCCTGTCTCAGCAA
TATCTCCGTCAATAGTCCATCCAACCCCTGTGCC back to topCoding sequence (CDS) from alignment at ch4:3313336..3315619+ >KJC3_005647-T2 ID=KJC3_005647-T2|Name=KJC3_005647-T2|organism=Aspergillus niger KJC3|type=CDS|length=7830bp|location=Sequence derived from alignment at ch4:3313336..3315619+ (Aspergillus niger KJC3) ATGGCGACGAGTGTGGATGCCAAACTGCTGAAGCAGACCAAATTCCCTCC GGAATTCAGCCGGAAGGTGGATATGACCAAGGTCAACATCGAGGTGATGA AGAAATGGATTGCTGGGAAGATCTCCGAGATTCTGGGAAATGAAGATGAC GTCGTTATTGAGCTCTGCTTTAACCTTTTGGAAGGGTCGCGGTTTCCCGA TATCAAGTCCCTGCAGATTCAGCTCACCGGATTCCTGGATAAAGATACTG GCAAGTTTTGCAAAGAGCTGTGGTCGCTATGCTTGAGTGCCCAGGAAAAC CCCCAGGGCGTGCCCAAGGAGTTGCTGGAGGCGAAGAAACTGGAGCTTAT CCAAGAGAAGATCGAAGCGGAAAGAGCCGCCGAGGAAGCCCGCAAACAGA AGGAACAGGAGCGCGCACGAGAACGAGAACTTGAAGACCTTCGACGCAGA GAACGGTCTGAGCGCACAAGGGGAGGAAGAAGAGGCGGTGGTCGCGGTGG TCGAGACTTTGATAGGCGTCGGTCGCCTCCGCGACAACGCAGCCGTGACC GTTTTCGAGGTCCGCCTGGCAGACGAGAGTTCGATTCCTACGTGCCCTCA GGCTCTCGTCGAGGCCGTCGGCCATCCCGTTCGCCCAGCCGCTCTCGTTC TCGCTCCGTGTCTTCCTCGCGCTCACCCCCACCACGTCGGCGCCATCCTG GCAACGACCGGAACCGACGACGTCGGTCGATTAGCGGCTCTGTCTCCCCG GACCGCGGTGATCGCAGGAGGCCCAGGAGACGCAGCCCTGATTACGGTGA TCGTGCAAGATCCATTACCCGCAGTGAATCATCACGCTCACGTAGTCCCA GAAGAGACCGACGGAGACGGAGATCCGTTTCTTCCCGCAGTGCATCGCGT TCACCTGTCTACAGGGATCGACGCAAGAGGAGAGGTTCTTCAGCATCGAG GTCCCGTTCGAGGTCGCAAGGGTCGGATGGTAGCGGCACCAGACGCAGAG GATCATCGCCTCACTCTTCACGAGATGATAAGAAAGAATCCACCGCTGAT ATTGCAAAGGCCCGCAAGTCCCGTGACGACCGCCGTTTGAGTCGCAGCAG AGATCGCAATGACACCCGCAGACGCCGGTACTCGTCCCAGAGTGTTAGCC GCAGCCGCAGTCGAGGTCGCTCCCGCAGCGCCAGCCAGGACTCCCGCAGT CGGAGTCGCAGCCGCAGCCACAGCCGCATGAGAGATAGGAAGCGGCGTCG GTCCATTGAGAGATATGCCCCAGTTGCGCGGAGACGGCGCAACACGTCCT CCGTATCCGTCCCCAGTGATAAACGAAAGAGGATGGCTGATGAAGACGAG GATGCCGCCAAACGATCACCACCGCAGGCTGAGAAGCCGAGCTCGAGCGA CCAAGAGATGAAGGATGCCACTGAGACTGCTGCTCCCTCCAATAACCCAG CTCGTGTACGCATCTCCAGCTCCGAACTACGCGAGAAGCTGCTCCGCGAG AAGATCATCGCGATGCGCCGGACCGCCTCGAGCGACAAGGTAGGTAGCTC TGCATCTTCAAGGTAGATGGCGACGAGTGTGGATGCCAAACTGCTGAAGC AGACCAAATTCCCTCCGGAATTCAGCCGGAAGGTGGATATGACCAAGGTC AACATCGAGGTGATGAAGAAATGGATTGCTGGGAAGATCTCCGAGATTCT GGGAAATGAAGATGACGTCGTTATTGAGCTCTGCTTTAACCTTTTGGAAG GGTCGCGGTTTCCCGATATCAAGTCCCTGCAGATTCAGCTCACCGGATTC CTGGATAAAGATACTGGCAAGTTTTGCAAAGAGCTGTGGTCGCTATGCTT GAGTGCCCAGGAAAACCCCCAGGGCGTGCCCAAGGAGTTGCTGGAGGCGA AGAAACTGGAGCTTATCCAAGAGAAGATCGAAGCGGAAAGAGCCGCCGAG GAAGCCCGCAAACAGAAGGAACAGGAGCGCGCACGAGAACGAGAACTTGA AGACCTTCGACGCAGAGAACGGTCTGAGCGCACAAGGGGAGGAAGAAGAG GCGGTGGTCGCGGTGGTCGAGACTTTGATAGGCGTCGGTCGCCTCCGCGA CAACGCAGCCGTGACCGTTTTCGAGGTCCGCCTGGCAGACGAGAGTTCGA TTCCTACGTGCCCTCAGGCTCTCGTCGAGGCCGTCGGCCATCCCGTTCGC CCAGCCGCTCTCGTTCTCGCTCCGTGTCTTCCTCGCGCTCACCCCCACCA CGTCGGCGCCATCCTGGCAACGACCGGAACCGACGACGTCGGTCGATTAG CGGCTCTGTCTCCCCGGACCGCGGTGATCGCAGGAGGCCCAGGAGACGCA GCCCTGATTACGGTGATCGTGCAAGATCCATTACCCGCAGTGAATCATCA CGCTCACGTAGTCCCAGAAGAGACCGACGGAGACGGAGATCCGTTTCTTC CCGCAGTGCATCGCGTTCACCTGTCTACAGGGATCGACGCAAGAGGAGAG GTTCTTCAGCATCGAGGTCCCGTTCGAGGTCGCAAGGGTCGGATGGTAGC GGCACCAGACGCAGAGGATCATCGCCTCACTCTTCACGAGATGATAAGAA AGAATCCACCGCTGATATTGCAAAGGCCCGCAAGTCCCGTGACGACCGCC GTTTGAGTCGCAGCAGAGATCGCAATGACACCCGCAGACGCCGGTACTCG TCCCAGAGTGTTAGCCGCAGCCGCAGTCGAGGTCGCTCCCGCAGCGCCAG CCAGGACTCCCGCAGTCGGAGTCGCAGCCGCAGCCACAGCCGCATGAGAG ATAGGAAGCGGCGTCGGTCCATTGAGAGATATGCCCCAGTTGCGCGGAGA CGGCGCAACACGTCCTCCGTATCCGTCCCCAGTGATAAACGAAAGAGGAT GGCTGATGAAGACGAGGATGCCGCCAAACGATCACCACCGCAGGCTGAGA AGCCGAGCTCGAGCGACCAAGAGATGAAGGATGCCACTGAGACTGCTGCT CCCTCCAATAACCCAGCTCGTGTACGCATCTCCAGCTCCGAACTACGCGA GAAGCTGCTCCGCGAGAAGATCATCGCGATGCGCCGGACCGCCTCGAGCG ACAAGGTAGGTAGCTCTGCATCTTCAAGGTAGATGGCGACGAGTGTGGAT GCCAAACTGCTGAAGCAGACCAAATTCCCTCCGGAATTCAGCCGGAAGGT GGATATGACCAAGGTCAACATCGAGGTGATGAAGAAATGGATTGCTGGGA AGATCTCCGAGATTCTGGGAAATGAAGATGACGTCGTTATTGAGCTCTGC TTTAACCTTTTGGAAGGGTCGCGGTTTCCCGATATCAAGTCCCTGCAGAT TCAGCTCACCGGATTCCTGGATAAAGATACTGGCAAGTTTTGCAAAGAGC TGTGGTCGCTATGCTTGAGTGCCCAGGAAAACCCCCAGGGCGTGCCCAAG GAGTTGCTGGAGGCGAAGAAACTGGAGCTTATCCAAGAGAAGATCGAAGC GGAAAGAGCCGCCGAGGAAGCCCGCAAACAGAAGGAACAGGAGCGCGCAC GAGAACGAGAACTTGAAGACCTTCGACGCAGAGAACGGTCTGAGCGCACA AGGGGAGGAAGAAGAGGCGGTGGTCGCGGTGGTCGAGACTTTGATAGGCG TCGGTCGCCTCCGCGACAACGCAGCCGTGACCGTTTTCGAGGTCCGCCTG GCAGACGAGAGTTCGATTCCTACGTGCCCTCAGGCTCTCGTCGAGGCCGT CGGCCATCCCGTTCGCCCAGCCGCTCTCGTTCTCGCTCCGTGTCTTCCTC GCGCTCACCCCCACCACGTCGGCGCCATCCTGGCAACGACCGGAACCGAC GACGTCGGTCGATTAGCGGCTCTGTCTCCCCGGACCGCGGTGATCGCAGG AGGCCCAGGAGACGCAGCCCTGATTACGGTGATCGTGCAAGATCCATTAC CCGCAGTGAATCATCACGCTCACGTAGTCCCAGAAGAGACCGACGGAGAC GGAGATCCGTTTCTTCCCGCAGTGCATCGCGTTCACCTGTCTACAGGGAT CGACGCAAGAGGAGAGGTTCTTCAGCATCGAGGTCCCGTTCGAGGTCGCA AGGGTCGGATGGTAGCGGCACCAGACGCAGAGGATCATCGCCTCACTCTT CACGAGATGATAAGAAAGAATCCACCGCTGATATTGCAAAGGCCCGCAAG TCCCGTGACGACCGCCGTTTGAGTCGCAGCAGAGATCGCAATGACACCCG CAGACGCCGGTACTCGTCCCAGAGTGTTAGCCGCAGCCGCAGTCGAGGTC GCTCCCGCAGCGCCAGCCAGGACTCCCGCAGTCGGAGTCGCAGCCGCAGC CACAGCCGCATGAGAGATAGGAAGCGGCGTCGGTCCATTGAGAGATATGC CCCAGTTGCGCGGAGACGGCGCAACACGTCCTCCGTATCCGTCCCCAGTG ATAAACGAAAGAGGATGGCTGATGAAGACGAGGATGCCGCCAAACGATCA CCACCGCAGGCTGAGAAGCCGAGCTCGAGCGACCAAGAGATGAAGGATGC CACTGAGACTGCTGCTCCCTCCAATAACCCAGCTCGTGTACGCATCTCCA GCTCCGAACTACGCGAGAAGCTGCTCCGCGAGAAGATCATCGCGATGCGC CGGACCGCCTCGAGCGACAAGGTAGGTAGCTCTGCATCTTCAAGGTAGAT GGCGACGAGTGTGGATGCCAAACTGCTGAAGCAGACCAAATTCCCTCCGG AATTCAGCCGGAAGGTGGATATGACCAAGGTCAACATCGAGGTGATGAAG AAATGGATTGCTGGGAAGATCTCCGAGATTCTGGGAAATGAAGATGACGT CGTTATTGAGCTCTGCTTTAACCTTTTGGAAGGGTCGCGGTTTCCCGATA TCAAGTCCCTGCAGATTCAGCTCACCGGATTCCTGGATAAAGATACTGGC AAGTTTTGCAAAGAGCTGTGGTCGCTATGCTTGAGTGCCCAGGAAAACCC CCAGGGCGTGCCCAAGGAGTTGCTGGAGGCGAAGAAACTGGAGCTTATCC AAGAGAAGATCGAAGCGGAAAGAGCCGCCGAGGAAGCCCGCAAACAGAAG GAACAGGAGCGCGCACGAGAACGAGAACTTGAAGACCTTCGACGCAGAGA ACGGTCTGAGCGCACAAGGGGAGGAAGAAGAGGCGGTGGTCGCGGTGGTC GAGACTTTGATAGGCGTCGGTCGCCTCCGCGACAACGCAGCCGTGACCGT TTTCGAGGTCCGCCTGGCAGACGAGAGTTCGATTCCTACGTGCCCTCAGG CTCTCGTCGAGGCCGTCGGCCATCCCGTTCGCCCAGCCGCTCTCGTTCTC GCTCCGTGTCTTCCTCGCGCTCACCCCCACCACGTCGGCGCCATCCTGGC AACGACCGGAACCGACGACGTCGGTCGATTAGCGGCTCTGTCTCCCCGGA CCGCGGTGATCGCAGGAGGCCCAGGAGACGCAGCCCTGATTACGGTGATC GTGCAAGATCCATTACCCGCAGTGAATCATCACGCTCACGTAGTCCCAGA AGAGACCGACGGAGACGGAGATCCGTTTCTTCCCGCAGTGCATCGCGTTC ACCTGTCTACAGGGATCGACGCAAGAGGAGAGGTTCTTCAGCATCGAGGT CCCGTTCGAGGTCGCAAGGGTCGGATGGTAGCGGCACCAGACGCAGAGGA TCATCGCCTCACTCTTCACGAGATGATAAGAAAGAATCCACCGCTGATAT TGCAAAGGCCCGCAAGTCCCGTGACGACCGCCGTTTGAGTCGCAGCAGAG ATCGCAATGACACCCGCAGACGCCGGTACTCGTCCCAGAGTGTTAGCCGC AGCCGCAGTCGAGGTCGCTCCCGCAGCGCCAGCCAGGACTCCCGCAGTCG GAGTCGCAGCCGCAGCCACAGCCGCATGAGAGATAGGAAGCGGCGTCGGT CCATTGAGAGATATGCCCCAGTTGCGCGGAGACGGCGCAACACGTCCTCC GTATCCGTCCCCAGTGATAAACGAAAGAGGATGGCTGATGAAGACGAGGA TGCCGCCAAACGATCACCACCGCAGGCTGAGAAGCCGAGCTCGAGCGACC AAGAGATGAAGGATGCCACTGAGACTGCTGCTCCCTCCAATAACCCAGCT CGTGTACGCATCTCCAGCTCCGAACTACGCGAGAAGCTGCTCCGCGAGAA GATCATCGCGATGCGCCGGACCGCCTCGAGCGACAAGGTAGGTAGCTCTG CATCTTCAAGGTAGATGGCGACGAGTGTGGATGCCAAACTGCTGAAGCAG ACCAAATTCCCTCCGGAATTCAGCCGGAAGGTGGATATGACCAAGGTCAA CATCGAGGTGATGAAGAAATGGATTGCTGGGAAGATCTCCGAGATTCTGG GAAATGAAGATGACGTCGTTATTGAGCTCTGCTTTAACCTTTTGGAAGGG TCGCGGTTTCCCGATATCAAGTCCCTGCAGATTCAGCTCACCGGATTCCT GGATAAAGATACTGGCAAGTTTTGCAAAGAGCTGTGGTCGCTATGCTTGA GTGCCCAGGAAAACCCCCAGGGCGTGCCCAAGGAGTTGCTGGAGGCGAAG AAACTGGAGCTTATCCAAGAGAAGATCGAAGCGGAAAGAGCCGCCGAGGA AGCCCGCAAACAGAAGGAACAGGAGCGCGCACGAGAACGAGAACTTGAAG ACCTTCGACGCAGAGAACGGTCTGAGCGCACAAGGGGAGGAAGAAGAGGC GGTGGTCGCGGTGGTCGAGACTTTGATAGGCGTCGGTCGCCTCCGCGACA ACGCAGCCGTGACCGTTTTCGAGGTCCGCCTGGCAGACGAGAGTTCGATT CCTACGTGCCCTCAGGCTCTCGTCGAGGCCGTCGGCCATCCCGTTCGCCC AGCCGCTCTCGTTCTCGCTCCGTGTCTTCCTCGCGCTCACCCCCACCACG TCGGCGCCATCCTGGCAACGACCGGAACCGACGACGTCGGTCGATTAGCG GCTCTGTCTCCCCGGACCGCGGTGATCGCAGGAGGCCCAGGAGACGCAGC CCTGATTACGGTGATCGTGCAAGATCCATTACCCGCAGTGAATCATCACG CTCACGTAGTCCCAGAAGAGACCGACGGAGACGGAGATCCGTTTCTTCCC GCAGTGCATCGCGTTCACCTGTCTACAGGGATCGACGCAAGAGGAGAGGT TCTTCAGCATCGAGGTCCCGTTCGAGGTCGCAAGGGTCGGATGGTAGCGG CACCAGACGCAGAGGATCATCGCCTCACTCTTCACGAGATGATAAGAAAG AATCCACCGCTGATATTGCAAAGGCCCGCAAGTCCCGTGACGACCGCCGT TTGAGTCGCAGCAGAGATCGCAATGACACCCGCAGACGCCGGTACTCGTC CCAGAGTGTTAGCCGCAGCCGCAGTCGAGGTCGCTCCCGCAGCGCCAGCC AGGACTCCCGCAGTCGGAGTCGCAGCCGCAGCCACAGCCGCATGAGAGAT AGGAAGCGGCGTCGGTCCATTGAGAGATATGCCCCAGTTGCGCGGAGACG GCGCAACACGTCCTCCGTATCCGTCCCCAGTGATAAACGAAAGAGGATGG CTGATGAAGACGAGGATGCCGCCAAACGATCACCACCGCAGGCTGAGAAG CCGAGCTCGAGCGACCAAGAGATGAAGGATGCCACTGAGACTGCTGCTCC CTCCAATAACCCAGCTCGTGTACGCATCTCCAGCTCCGAACTACGCGAGA AGCTGCTCCGCGAGAAGATCATCGCGATGCGCCGGACCGCCTCGAGCGAC AAGGTAGGTAGCTCTGCATCTTCAAGGTAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
Term | Definition |
GO:0006397 | mRNA processing |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type |
KJC3_005647-T2.utr5p1 | KJC3_005647-T2.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type |
KJC3_005647-T2.utr3p1 | KJC3_005647-T2.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
Property Name | Value |
DBxref | InterPro:IPR036483 |
DBxref | InterPro:IPR002483 |
DBxref | PFAM:PF01480 |
Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
ch4 | supercontig | ch4:3313336..3315619 + |
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