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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:3389237..3390636- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_005666-T1 ID=KJC3_005666-T1|Name=KJC3_005666-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1400bp|location=Sequence derived from alignment at ch4:3389237..3390636- (Aspergillus niger KJC3)
ATGGGGCAGGGTGAACACGTGAGAGACCAGCGCTGCCTGCAAAGCCGGCG
CTCGCGACTCATTCTGGCAATCCTTGTATTCATTGCCCTTCTCGCCGTCG
TCATACCACCAGCAGTAGTGTTGACCCTACACAAATTCACCATGGGCCCT
AAAGCATCAGTTTTCGTACCGCTCTACGTCTACCCTGCCCCGGGAGCATG
GGATCCCTTAGAAAAGGTGTAGGTGCTTTTTTCCTTTTGTTATCCCCTTC
TCCATATCTCAACAAGCCCTCGCCAAATGTTAACCCCCCTCCCCCTTCCC
CTTCCCCCCGCCAACCACATTGTACTCCAGTCCATGCCCACGCTATCTGT
CAGCCACCGGATGTCCCGCGGCACGATACAAGTAACCCTGATGTACGAAG
GACGCAGCTGAACGCCACAGGATCTCTTCTCATCCCGACGTCAATTTCAC
CGTCGTGGTCAATCCTGGTAGTGGTCCAGGGCCCAACGCCTTGCCCGATG
GAAATTACACACGAGAGATACCCAAGCTGGCGTCTTATGGCAACGTCCGC
CTCCTAGGCTATGTTGCTACCACGTACGGGCAGCGCAACTTCTCGTTGGT
GCGGCGGGACATTGAGACCTATGCGGCGTGGCCGACCAACAGTTCGAACC
CCAATCTAGCGGTTCGGGGTATATTTTTCGACGAAACCCCCCAGCAATAC
GAAAGCAATACCTTGGCCTACCTCCAAGATCTGACTGCTGTCGTGAAGAC
AACCACCGGCCTGGGTCCGGACCATTTTGTACGTGCAGAAGTCTCTCCCG
TATTTTCATTCTTTCATTACTAGGGGTAACGCCGGGTAATTTACACCATT
ACCAAATTTCGGCAGCTGGCATTTCCGCCCACTCGCTCATTGCCTTTTGC
TGCCCCCTCAAACGCATGGTTCTTTTTCTCTTTGCTTTTTTTGGATGCTT
CTGTTCTGGCTCCTGTTCCTGCCGACAATCCTCATCCAGAGCCGTCGTTT
GGATCGCCCGGATAGATCTGGATGGACGCCCACCATTGGCCCGAGTTTAC
CATGCTAACGAGACTGTCTCAACTAGGTCGTCCATAATCCCGGCACGATC
CCTGATGCCCGCTACTTGCCGACGGCTGATTCGACTGTGGTCTTTGAGGC
AACCTACGAGACGTTCTTGGAGCGTCAAGGGGCTAAGCTGTTTCAGGAAA
TCCCGAACAGCACTCGCAGCCAGCTGTGCGCCGTGGTCCACTCGGTGCCA
GACAGCGTGGAAGGGCACAAGTTCCGAGACCTGGTGAAGCAAGTGCGCAA
GGTCGCCGATGAGATTTTCATCACTCATCTGGATACAGATTATTATGCGA
GTTTTGGCGGCCAATGGGAGGAATTTGTGGAACTAATGGCTCGATCGTGA
back to topCoding sequence (CDS) from alignment at ch4:3389237..3390636- >KJC3_005666-T1 ID=KJC3_005666-T1|Name=KJC3_005666-T1|organism=Aspergillus niger KJC3|type=CDS|length=2700bp|location=Sequence derived from alignment at ch4:3389237..3390636- (Aspergillus niger KJC3)
GTCGTCCATAATCCCGGCACGATCCCTGATGCCCGCTACTTGCCGACGGC
TGATTCGACTGTGGTCTTTGAGGCAACCTACGAGACGTTCTTGGAGCGTC
AAGGGGCTAAGCTGTTTCAGGAAATCCCGAACAGCACTCGCAGCCAGCTG
TGCGCCGTGGTCCACTCGGTGCCAGACAGCGTGGAAGGGCACAAGTTCCG
AGACCTGGTGAAGCAAGTGCGCAAGGTCGCCGATGAGATTTTCATCACTC
ATCTGGATACAGATTATTATGCGAGTTTTGGCGGCCAATGGGAGGAATTT
GTGGAACTAATGGCTCGATCGTGAGATCTCTTCTCATCCCGACGTCAATT
TCACCGTCGTGGTCAATCCTGGTAGTGGTCCAGGGCCCAACGCCTTGCCC
GATGGAAATTACACACGAGAGATACCCAAGCTGGCGTCTTATGGCAACGT
CCGCCTCCTAGGCTATGTTGCTACCACGTACGGGCAGCGCAACTTCTCGT
TGGTGCGGCGGGACATTGAGACCTATGCGGCGTGGCCGACCAACAGTTCG
AACCCCAATCTAGCGGTTCGGGGTATATTTTTCGACGAAACCCCCCAGCA
ATACGAAAGCAATACCTTGGCCTACCTCCAAGATCTGACTGCTGTCGTGA
AGACAACCACCGGCCTGGGTCCGGACCATTTTATGGGGCAGGGTGAACAC
GTGAGAGACCAGCGCTGCCTGCAAAGCCGGCGCTCGCGACTCATTCTGGC
AATCCTTGTATTCATTGCCCTTCTCGCCGTCGTCATACCACCAGCAGTAG
TGTTGACCCTACACAAATTCACCATGGGCCCTAAAGCATCAGTTTTCGTA
CCGCTCTACGTCTACCCTGCCCCGGGAGCATGGGATCCCTTAGAAAAGGT
GTCGTCCATAATCCCGGCACGATCCCTGATGCCCGCTACTTGCCGACGGC
TGATTCGACTGTGGTCTTTGAGGCAACCTACGAGACGTTCTTGGAGCGTC
AAGGGGCTAAGCTGTTTCAGGAAATCCCGAACAGCACTCGCAGCCAGCTG
TGCGCCGTGGTCCACTCGGTGCCAGACAGCGTGGAAGGGCACAAGTTCCG
AGACCTGGTGAAGCAAGTGCGCAAGGTCGCCGATGAGATTTTCATCACTC
ATCTGGATACAGATTATTATGCGAGTTTTGGCGGCCAATGGGAGGAATTT
GTGGAACTAATGGCTCGATCGTGAGATCTCTTCTCATCCCGACGTCAATT
TCACCGTCGTGGTCAATCCTGGTAGTGGTCCAGGGCCCAACGCCTTGCCC
GATGGAAATTACACACGAGAGATACCCAAGCTGGCGTCTTATGGCAACGT
CCGCCTCCTAGGCTATGTTGCTACCACGTACGGGCAGCGCAACTTCTCGT
TGGTGCGGCGGGACATTGAGACCTATGCGGCGTGGCCGACCAACAGTTCG
AACCCCAATCTAGCGGTTCGGGGTATATTTTTCGACGAAACCCCCCAGCA
ATACGAAAGCAATACCTTGGCCTACCTCCAAGATCTGACTGCTGTCGTGA
AGACAACCACCGGCCTGGGTCCGGACCATTTTATGGGGCAGGGTGAACAC
GTGAGAGACCAGCGCTGCCTGCAAAGCCGGCGCTCGCGACTCATTCTGGC
AATCCTTGTATTCATTGCCCTTCTCGCCGTCGTCATACCACCAGCAGTAG
TGTTGACCCTACACAAATTCACCATGGGCCCTAAAGCATCAGTTTTCGTA
CCGCTCTACGTCTACCCTGCCCCGGGAGCATGGGATCCCTTAGAAAAGGT
GTCGTCCATAATCCCGGCACGATCCCTGATGCCCGCTACTTGCCGACGGC
TGATTCGACTGTGGTCTTTGAGGCAACCTACGAGACGTTCTTGGAGCGTC
AAGGGGCTAAGCTGTTTCAGGAAATCCCGAACAGCACTCGCAGCCAGCTG
TGCGCCGTGGTCCACTCGGTGCCAGACAGCGTGGAAGGGCACAAGTTCCG
AGACCTGGTGAAGCAAGTGCGCAAGGTCGCCGATGAGATTTTCATCACTC
ATCTGGATACAGATTATTATGCGAGTTTTGGCGGCCAATGGGAGGAATTT
GTGGAACTAATGGCTCGATCGTGAGATCTCTTCTCATCCCGACGTCAATT
TCACCGTCGTGGTCAATCCTGGTAGTGGTCCAGGGCCCAACGCCTTGCCC
GATGGAAATTACACACGAGAGATACCCAAGCTGGCGTCTTATGGCAACGT
CCGCCTCCTAGGCTATGTTGCTACCACGTACGGGCAGCGCAACTTCTCGT
TGGTGCGGCGGGACATTGAGACCTATGCGGCGTGGCCGACCAACAGTTCG
AACCCCAATCTAGCGGTTCGGGGTATATTTTTCGACGAAACCCCCCAGCA
ATACGAAAGCAATACCTTGGCCTACCTCCAAGATCTGACTGCTGTCGTGA
AGACAACCACCGGCCTGGGTCCGGACCATTTTATGGGGCAGGGTGAACAC
GTGAGAGACCAGCGCTGCCTGCAAAGCCGGCGCTCGCGACTCATTCTGGC
AATCCTTGTATTCATTGCCCTTCTCGCCGTCGTCATACCACCAGCAGTAG
TGTTGACCCTACACAAATTCACCATGGGCCCTAAAGCATCAGTTTTCGTA
CCGCTCTACGTCTACCCTGCCCCGGGAGCATGGGATCCCTTAGAAAAGGT back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | CAZy:GH135 |
| DBxref | InterPro:IPR021986 |
| DBxref | PFAM:PF12138 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch4 | supercontig | ch4:3389237..3390636 - |
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