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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:3401548..3405054- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_005672-T1 ID=KJC3_005672-T1|Name=KJC3_005672-T1|organism=Aspergillus niger KJC3|type=mRNA|length=3507bp|location=Sequence derived from alignment at ch4:3401548..3405054- (Aspergillus niger KJC3)
CTCTTGGGAATCAGGAGCGTCTTATTGCTTACATGGTTCTTGGTCTTGGA
GCTCTCGCTAACCTGATGGAGACTGGGCCTCACCAGTAGTATCAAACTGG
CTGGTTGACAGACTGTCCGCCTCAGTAAGTGAAAGTTAATACCTTCCATC
TGCCTGTAAACAACTGCTTGCTCACGATGTTTGCACTCTAGTATTTATCG
TCTCTGTTGTTCCCTATGCTTCAGCATCTTCGGCATGGACGAGACCACGT
TCAGTGAACCACCCCGGAAACGTGCGCGAATCAGTTCTCTACAAGACCAA
CCTGATCCAGTAACTGCAGACAACGATTCAGAATCGCCAGCATGGGATCA
ACTGCAGAGTCCTTATCATCTGACAGACTACTACACGGATCAGCACAACT
CACCGGCTTTAGCTATTAACAGTGACCCTTTCCAGTCGCCAGCAGCTAGC
TGGACCCAGGATGGCTTCTCACAGGACCCAGGTTACCTAGCATCTCAGGA
AGAGCTGCGATGCATACTCTTCTCCCTCGCCAATTCGACTGCTCCAACAC
GGGTGTCCAGTCCAGACACTGTGGGAAGGTTCGAAATAGCCGAACATTTA
CCACGCTCAAAAACACACCAGCCAGAACGAAGAGGAGAGCTCTTGCAATC
TTCTCTGTCGAGCCGGAGGCGAATTGAATATCTGAAAAATTATGTGGCTG
AGGTAGCACCTTGGGTATGTGTAAGATGTCTATTCTGACCCATGCGGAGA
CTAAATGATATTTAGCTGGACATGTTCGACTCTCAGTGCACCTTTCGCCA
ACAAGTGCCTGTGCTGGCTCGCTCCTTCCCTGCTCTCTCATATGCCATGC
TTGCCATTTCTGCCCGTCAGATCGAACGCAAAAATGGGGTTCGAAATTGG
TTTGATAGCCTCGAACTGTACCAAGAGGCCATCCGACGGCTAAGTCCACT
TCTTCAACTACGTGACCCGAAGATCGTAGCGGCATGTGTGCTTCTCTGTT
GCCTGGAAATGATGTCTGCTCGTGCCCAAGATTGGCGTCGCCATCTTGAA
GGCTGCGCGGCCTTGTTTGATGCGTTTGGTATTCATGGCTTCAGCCAGGG
CATTCTGCAGGCAGTGTTCTGGTGCTACGCTAGAATGGGTGAGTCTAGAG
CTGCATTATATCCCTTTCTTTTATACATTGTGCCTTGTTACTGCATTATT
TCAATTGATTCTGACTGAAGTAGATTTGTGCGGTGCGCTTATTTCAGATG
GCACACAGACCACGCTTCTGCATCCCTCTAAATGGCTTCCGGAAGGCTAT
CGGACAGAGGACGCGCATCAGCTGTTCCAGAGTGTCAAGTCGCCAGATAT
GCATGCAAATTATGCGGTGTATTTGTGCGTGAAAGCGACCGAGCTGGTGT
CCGACCGTACAAAGTTTGTGGAATTAGGTGAAGACAATGGGTGTACGCCA
GAGAGGTTCCGCACACGATGGCTCAGTCTCTGGAATGACCTACAATGCTG
GTTTTCCGAGCGTCCCAGCGAGCTTCTTCCAGTGCAGACAGTCAACCGCA
AGCCCTTCCCTCATATCCTGTTCGTCCACTGGGCTGCTATCTCGTCAAAC
CAACTGTACCACACAGCATGCATACTATTGCTGAAGATGATGCCCAAGGA
AATCCGGCTTCCCAGATCGCCAACTTTGTTTCCTCTATGGCATGCTCGCC
GAATATGTGGCATTTCCCTGGCAAACCCACACCAAGGGTGCTTGAACAAC
TCTATCCAACCACTGTGGATTGCCGGACAACTATTCAGTCACGCCTCGGA
GCATGAAGAGATTATCAGGCTGATTCAAAGCATCGAGGCCGAAACTGGCT
GGGGAACATGTTGGCGGATTCGGGATCTGGAGGTTGCCTGGGGTTGTTCC
GGAATGAGAGGAACATGAGCCTTCATGCTAGAAACCATCCAGGAATGACC
AATCCTCTCGAAGTTGCGTCATATAATCACCCAAATCCCACCCCGTGATA
TTACGCACGCGTTCAAAGCCTTCCAAGATTTCCTGTTGCTGGGATTCATG
TGTCATTCTTCTGGCAGCCACCAGGAATGAGGCTATCAGGCAGGGGTCCC
AGGATTCCCGCCGGTCATTATTCAGTGCAATGCCACAGATACGCTGCGAA
TGCCACAGCGGCGACAGAGTTATTGATTGCAACCCTAATAGCGCTGTGCG
TGGCTTACACTGCAGCAAAAGCAGCATGGCAGTATGATACAACTGATTGC
TAAAGGCACCCGTCCCGTTTGCAAACAGTAGCAGCGGAAAGCCACTTTCG
GCCCGGGAGAGTTGATCATCAATACCCAAATCCACCATCGGTTGGAATTC
GTGTGGCCGCAGATGGTACCACTGCTCAATCGCGTCAAATACATCGAGCC
AGCTATCCAGCTGCTGCTGTGGAGCTGCAAATTGGTCGGAGCTGGCCTGC
TGGTGATATACTCGCAAAGCTTTTCCACATAGCCAGAGGAGGACGTGGGC
ATACGCTCGAGTCCTTTGCCGGACCTCCTCTATGCTCGACAAGATTAGTA
AACTAGGTACTGGGAACATCGGAAGTTGTATCTGGATTGGTCTGTCGTTT
GCGAGCGCTGCACTCAGGTCTGGTTCAGTCAGAATGGCGCATCCATATGT
GGACGACTTGTGAAACGAACCTAAGCGGAAGAACATCCAGTAGATAGAGG
ATGCGATACCCGAATCCAGTGCTTGATGAGCCAATGACTCGAACTTCCGA
GATTTGAAGTTCTGTACGTTCTTCCAGGTCTGAGCGATATCGGCGACAAG
CCATCTTGTCTCTTCTAGCACCGTCGTCAAAGCATTTTCGACAGTGAACG
TGGAGCTAGAGTTTGACCACAGTGGATTGGTGCACAGATCTGCATGGCTA
TAACGAGGCATTCGCCGATGCCTCATGTCCTTCTGGATAACGCAAGCATT
GGAGAGATCCAGCAGAGCTGTCATGAGCGGTTCCGAGCTGAGTGCCATCT
GAACAGCAGTGATTCCGAATGGATGACTGAGATCGCAAACATCAAGCTGC
AAGCAATCCGTCAGACTTAAGCTCCACTATACTGCAGTATACTCACCCAT
GGTGCTACATGGTAGCGATAATGACATAAAAGCTTCAGCTTTGCCGTATC
TGTCAATGAATTGGCACTTATGGTCGAAGGCAGCCCCTCGGAAGCACCCA
CTACACCAGGGGCGTGCTTCAGCACGACAGGAGTCCTAGGCACTAACTCC
GACGAGACAAGTTCAGAACTCGTCTTCTCACATCCTTCATCTGGAGCACC
CCTATGGTTATTGACACCATCGCCTGTCCCCAATGCAAGAAGCCCATGAA
CGGCAGATTTGTCCCTGTCGCTGAAGGCCGCATTGCCGAACAATGAAGTG
GGCATGTCAGGAGAGCCATGCAGGCCATCACCATTATCAGCCTCAGAACT
AAGTCTAGATGGAGCCATCACAGTCTCATCTCCTGAGGCCCTCGCGTAAT
CACTTAA back to topCoding sequence (CDS) from alignment at ch4:3401548..3405054- >KJC3_005672-T1 ID=KJC3_005672-T1|Name=KJC3_005672-T1|organism=Aspergillus niger KJC3|type=CDS|length=4644bp|location=Sequence derived from alignment at ch4:3401548..3405054- (Aspergillus niger KJC3)
ATTTGTGCGGTGCGCTTATTTCAGATGGCACACAGACCACGCTTCTGCAT
CCCTCTAAATGGCTTCCGGAAGGCTATCGGACAGAGGACGCGCATCAGCT
GTTCCAGAGTGTCAAGTCGCCAGATATGCATGCAAATTATGCGGTGTATT
TGTGCGTGAAAGCGACCGAGCTGGTGTCCGACCGTACAAAGTTTGTGGAA
TTAGGTGAAGACAATGGGTGTACGCCAGAGAGGTTCCGCACACGATGGCT
CAGTCTCTGGAATGACCTACAATGCTGGTTTTCCGAGCGTCCCAGCGAGC
TTCTTCCAGTGCAGACAGTCAACCGCAAGCCCTTCCCTCATATCCTGTTC
GTCCACTGGGCTGCTATCTCGTCAAACCAACTGTACCACACAGCATGCAT
ACTATTGCTGAAGATGATGCCCAAGGAAATCCGGCTTCCCAGATCGCCAA
CTTTGTTTCCTCTATGGCATGCTCGCCGAATATGTGGCATTTCCCTGGCA
AACCCACACCAAGGGTGCTTGAACAACTCTATCCAACCACTGTGGATTGC
CGGACAACTATTCAGTCACGCCTCGGAGCATGAAGAGATTATCAGGCTGA
TTCAAAGCATCGAGGCCGAAACTGGCTGGGGAACATGTTGGCGGATTCGG
GATCTGGAGGTTGCCTGGGGTTGTTCCGGAATGAGAGGAACATGACTGGA
CATGTTCGACTCTCAGTGCACCTTTCGCCAACAAGTGCCTGTGCTGGCTC
GCTCCTTCCCTGCTCTCTCATATGCCATGCTTGCCATTTCTGCCCGTCAG
ATCGAACGCAAAAATGGGGTTCGAAATTGGTTTGATAGCCTCGAACTGTA
CCAAGAGGCCATCCGACGGCTAAGTCCACTTCTTCAACTACGTGACCCGA
AGATCGTAGCGGCATGTGTGCTTCTCTGTTGCCTGGAAATGATGTCTGCT
CGTGCCCAAGATTGGCGTCGCCATCTTGAAGGCTGCGCGGCCTTGTTTGA
TGCGTTTGGTATTCATGGCTTCAGCCAGGGCATTCTGCAGGCAGTGTTCT
GGTGCTACGCTAGAATGGATGGACGAGACCACGTTCAGTGAACCACCCCG
GAAACGTGCGCGAATCAGTTCTCTACAAGACCAACCTGATCCAGTAACTG
CAGACAACGATTCAGAATCGCCAGCATGGGATCAACTGCAGAGTCCTTAT
CATCTGACAGACTACTACACGGATCAGCACAACTCACCGGCTTTAGCTAT
TAACAGTGACCCTTTCCAGTCGCCAGCAGCTAGCTGGACCCAGGATGGCT
TCTCACAGGACCCAGGTTACCTAGCATCTCAGGAAGAGCTGCGATGCATA
CTCTTCTCCCTCGCCAATTCGACTGCTCCAACACGGGTGTCCAGTCCAGA
CACTGTGGGAAGGTTCGAAATAGCCGAACATTTACCACGCTCAAAAACAC
ACCAGCCAGAACGAAGAGGAGAGCTCTTGCAATCTTCTCTGTCGAGCCGG
AGGCGAATTGAATATCTGAAAAATTATGTGGCTGAGGTAGCACCTTGGAT
TTGTGCGGTGCGCTTATTTCAGATGGCACACAGACCACGCTTCTGCATCC
CTCTAAATGGCTTCCGGAAGGCTATCGGACAGAGGACGCGCATCAGCTGT
TCCAGAGTGTCAAGTCGCCAGATATGCATGCAAATTATGCGGTGTATTTG
TGCGTGAAAGCGACCGAGCTGGTGTCCGACCGTACAAAGTTTGTGGAATT
AGGTGAAGACAATGGGTGTACGCCAGAGAGGTTCCGCACACGATGGCTCA
GTCTCTGGAATGACCTACAATGCTGGTTTTCCGAGCGTCCCAGCGAGCTT
CTTCCAGTGCAGACAGTCAACCGCAAGCCCTTCCCTCATATCCTGTTCGT
CCACTGGGCTGCTATCTCGTCAAACCAACTGTACCACACAGCATGCATAC
TATTGCTGAAGATGATGCCCAAGGAAATCCGGCTTCCCAGATCGCCAACT
TTGTTTCCTCTATGGCATGCTCGCCGAATATGTGGCATTTCCCTGGCAAA
CCCACACCAAGGGTGCTTGAACAACTCTATCCAACCACTGTGGATTGCCG
GACAACTATTCAGTCACGCCTCGGAGCATGAAGAGATTATCAGGCTGATT
CAAAGCATCGAGGCCGAAACTGGCTGGGGAACATGTTGGCGGATTCGGGA
TCTGGAGGTTGCCTGGGGTTGTTCCGGAATGAGAGGAACATGACTGGACA
TGTTCGACTCTCAGTGCACCTTTCGCCAACAAGTGCCTGTGCTGGCTCGC
TCCTTCCCTGCTCTCTCATATGCCATGCTTGCCATTTCTGCCCGTCAGAT
CGAACGCAAAAATGGGGTTCGAAATTGGTTTGATAGCCTCGAACTGTACC
AAGAGGCCATCCGACGGCTAAGTCCACTTCTTCAACTACGTGACCCGAAG
ATCGTAGCGGCATGTGTGCTTCTCTGTTGCCTGGAAATGATGTCTGCTCG
TGCCCAAGATTGGCGTCGCCATCTTGAAGGCTGCGCGGCCTTGTTTGATG
CGTTTGGTATTCATGGCTTCAGCCAGGGCATTCTGCAGGCAGTGTTCTGG
TGCTACGCTAGAATGGATGGACGAGACCACGTTCAGTGAACCACCCCGGA
AACGTGCGCGAATCAGTTCTCTACAAGACCAACCTGATCCAGTAACTGCA
GACAACGATTCAGAATCGCCAGCATGGGATCAACTGCAGAGTCCTTATCA
TCTGACAGACTACTACACGGATCAGCACAACTCACCGGCTTTAGCTATTA
ACAGTGACCCTTTCCAGTCGCCAGCAGCTAGCTGGACCCAGGATGGCTTC
TCACAGGACCCAGGTTACCTAGCATCTCAGGAAGAGCTGCGATGCATACT
CTTCTCCCTCGCCAATTCGACTGCTCCAACACGGGTGTCCAGTCCAGACA
CTGTGGGAAGGTTCGAAATAGCCGAACATTTACCACGCTCAAAAACACAC
CAGCCAGAACGAAGAGGAGAGCTCTTGCAATCTTCTCTGTCGAGCCGGAG
GCGAATTGAATATCTGAAAAATTATGTGGCTGAGGTAGCACCTTGGATTT
GTGCGGTGCGCTTATTTCAGATGGCACACAGACCACGCTTCTGCATCCCT
CTAAATGGCTTCCGGAAGGCTATCGGACAGAGGACGCGCATCAGCTGTTC
CAGAGTGTCAAGTCGCCAGATATGCATGCAAATTATGCGGTGTATTTGTG
CGTGAAAGCGACCGAGCTGGTGTCCGACCGTACAAAGTTTGTGGAATTAG
GTGAAGACAATGGGTGTACGCCAGAGAGGTTCCGCACACGATGGCTCAGT
CTCTGGAATGACCTACAATGCTGGTTTTCCGAGCGTCCCAGCGAGCTTCT
TCCAGTGCAGACAGTCAACCGCAAGCCCTTCCCTCATATCCTGTTCGTCC
ACTGGGCTGCTATCTCGTCAAACCAACTGTACCACACAGCATGCATACTA
TTGCTGAAGATGATGCCCAAGGAAATCCGGCTTCCCAGATCGCCAACTTT
GTTTCCTCTATGGCATGCTCGCCGAATATGTGGCATTTCCCTGGCAAACC
CACACCAAGGGTGCTTGAACAACTCTATCCAACCACTGTGGATTGCCGGA
CAACTATTCAGTCACGCCTCGGAGCATGAAGAGATTATCAGGCTGATTCA
AAGCATCGAGGCCGAAACTGGCTGGGGAACATGTTGGCGGATTCGGGATC
TGGAGGTTGCCTGGGGTTGTTCCGGAATGAGAGGAACATGACTGGACATG
TTCGACTCTCAGTGCACCTTTCGCCAACAAGTGCCTGTGCTGGCTCGCTC
CTTCCCTGCTCTCTCATATGCCATGCTTGCCATTTCTGCCCGTCAGATCG
AACGCAAAAATGGGGTTCGAAATTGGTTTGATAGCCTCGAACTGTACCAA
GAGGCCATCCGACGGCTAAGTCCACTTCTTCAACTACGTGACCCGAAGAT
CGTAGCGGCATGTGTGCTTCTCTGTTGCCTGGAAATGATGTCTGCTCGTG
CCCAAGATTGGCGTCGCCATCTTGAAGGCTGCGCGGCCTTGTTTGATGCG
TTTGGTATTCATGGCTTCAGCCAGGGCATTCTGCAGGCAGTGTTCTGGTG
CTACGCTAGAATGGATGGACGAGACCACGTTCAGTGAACCACCCCGGAAA
CGTGCGCGAATCAGTTCTCTACAAGACCAACCTGATCCAGTAACTGCAGA
CAACGATTCAGAATCGCCAGCATGGGATCAACTGCAGAGTCCTTATCATC
TGACAGACTACTACACGGATCAGCACAACTCACCGGCTTTAGCTATTAAC
AGTGACCCTTTCCAGTCGCCAGCAGCTAGCTGGACCCAGGATGGCTTCTC
ACAGGACCCAGGTTACCTAGCATCTCAGGAAGAGCTGCGATGCATACTCT
TCTCCCTCGCCAATTCGACTGCTCCAACACGGGTGTCCAGTCCAGACACT
GTGGGAAGGTTCGAAATAGCCGAACATTTACCACGCTCAAAAACACACCA
GCCAGAACGAAGAGGAGAGCTCTTGCAATCTTCTCTGTCGAGCCGGAGGC
GAATTGAATATCTGAAAAATTATGTGGCTGAGGTAGCACCTTGG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_005672-T1.utr3p1 | KJC3_005672-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR021858 |
| DBxref | PFAM:PF11951 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch4 | supercontig | ch4:3401548..3405054 - |
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