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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:3416919..3417754- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_005678-T1 ID=KJC3_005678-T1|Name=KJC3_005678-T1|organism=Aspergillus niger KJC3|type=mRNA|length=836bp|location=Sequence derived from alignment at ch4:3416919..3417754- (Aspergillus niger KJC3)
AAATGACGTCGATGCGGTTCCCCACCAGAAATTCAATCCCTCACTTCAAC
AACATCACAACAACTTCATCAACAATTCCTTCCTCTTCCCACAAAATAAC
TGTAAGTCGTTTCCAATATGATACATACCACTTAGACCAACCCTCCCCCA
TCCACTACTCTCCCTCTCACCGAACACCCAAATAACCCCACCCACCACCA
ACCCCGCAACCACACCAGACCTCAAAATCACACACACAGAGAAAGCTAAC
AAACAGCCCCCAAACCCAGCAAACCAGTCCCAACACAATGTCCTGGTACC
AAAAATCCTTCACTCTGCCTGCCCGCTCGCGCGGCAGCTACCTCATCACC
GACCACGTCCTCGAGCAACTCCCCGAGATCAAGAACTACAAGGTCGGCAT
GCTGAACCTCTTCGTGCAACACACCAGCTGCGCGCTCTCCCTGAACGAGA
ACTGGGATGACGATGTGCGCGCCGATATGAGTGATGCGCTGGATCGCATC
GCTCCTTATGATAAGAAGGGGAACCTGTATAGACATTCGGCTGAGGGGGA
GGATGACATGCCGGTGCGTTTACCTGACTCTCATTTATTTTTCCAACTAT
AAGCTGGGAGAGGGATACTGATGGTGTTGGCAGGCTCATATCAAGTCAGC
GTTGATTGGCGCTTCGGTTACGATTCCCATCTCCAATGGACGCTTGGCTA
CGGGTACGTGGCAGGGTATTTGGTACTTGGAGTTCAGGGCCATGAGACAC
TCCCGGAAGGTGGTTGCTACGATTCAAGGTGAGAAGGCTTGACTTAATGC
TTGTGGTGGTAGAGGTGGTGGTGGTGAGGGAGTGCG back to topCoding sequence (CDS) from alignment at ch4:3416919..3417754- >KJC3_005678-T1 ID=KJC3_005678-T1|Name=KJC3_005678-T1|organism=Aspergillus niger KJC3|type=CDS|length=870bp|location=Sequence derived from alignment at ch4:3416919..3417754- (Aspergillus niger KJC3)
GCTCATATCAAGTCAGCGTTGATTGGCGCTTCGGTTACGATTCCCATCTC
CAATGGACGCTTGGCTACGGGTACGTGGCAGGGTATTTGGTACTTGGAGT
TCAGGGCCATGAGACACTCCCGGAAGGTGGTTGCTACGATTCAAGGTGAG
AAGGCTTGAATGTCCTGGTACCAAAAATCCTTCACTCTGCCTGCCCGCTC
GCGCGGCAGCTACCTCATCACCGACCACGTCCTCGAGCAACTCCCCGAGA
TCAAGAACTACAAGGTCGGCATGCTGAACCTCTTCGTGCAACACACCAGC
TGCGCGCTCTCCCTGAACGAGAACTGGGATGACGATGTGCGCGCCGATAT
GAGTGATGCGCTGGATCGCATCGCTCCTTATGATAAGAAGGGGAACCTGT
ATAGACATTCGGCTGAGGGGGAGGATGACATGCCGGCTCATATCAAGTCA
GCGTTGATTGGCGCTTCGGTTACGATTCCCATCTCCAATGGACGCTTGGC
TACGGGTACGTGGCAGGGTATTTGGTACTTGGAGTTCAGGGCCATGAGAC
ACTCCCGGAAGGTGGTTGCTACGATTCAAGGTGAGAAGGCTTGAATGTCC
TGGTACCAAAAATCCTTCACTCTGCCTGCCCGCTCGCGCGGCAGCTACCT
CATCACCGACCACGTCCTCGAGCAACTCCCCGAGATCAAGAACTACAAGG
TCGGCATGCTGAACCTCTTCGTGCAACACACCAGCTGCGCGCTCTCCCTG
AACGAGAACTGGGATGACGATGTGCGCGCCGATATGAGTGATGCGCTGGA
TCGCATCGCTCCTTATGATAAGAAGGGGAACCTGTATAGACATTCGGCTG
AGGGGGAGGATGACATGCCG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_005678-T1.utr3p1 | KJC3_005678-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR001602 |
| DBxref | InterPro:IPR035917 |
| DBxref | PFAM:PF01894 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch4 | supercontig | ch4:3416919..3417754 - |
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