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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:3417820..3419260- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_005679-T2 ID=KJC3_005679-T2|Name=KJC3_005679-T2|organism=Aspergillus niger KJC3|type=mRNA|length=1441bp|location=Sequence derived from alignment at ch4:3417820..3419260- (Aspergillus niger KJC3)
GACTATATTAAGAATGTGTTCCTAAGTCCCCGTCTGGCTCTAAACCAGGG
TGATCGACAGGGCTAGAGAACACCAAGCAGTCATCACTGAGCATGTGAGA
GCCGGGAAACTGGCAACCATCCAGCTGCAGCGACCACGAGGTGCAGCTAT
GCCTTCGGACTGGCCAGCAGCTGACAACTTCTAATTTAATCCAGTGCATA
TCCCTGACAATCGGTCACTCCGGGTTGTCAAGTCGGCACCAGGTTCATCC
GCGAGACCTGGAGTACAGGGGGATTCAGCCAGCCAGCCGTGGCAGGTGGC
CTCGCAAAAATAGAATATAATATGCCGCGGTGCCTTTATAGATGATCTCC
ACAGTAAGCCTGTTTGCCGGAAAAGAAGTGCGCAATGTGGCTAAAAAGCA
AATACATCGTGGTGGCTCTTCTTGCCGCACCGGCGGCAGCCGTCACACCG
ATATCCAACGATGAAATGACCAACTTCCTCAGCCAAGGCGCTGTAGAGCT
CGCTACCCGGTATGCGCCTCTCTGGTTCTTTGGCCAGGCAGTGGATCAGC
CTCCTTGTTATCCGACCTGGGCTTTCGGAGGCTCACCCAACTCGTCGGAC
ATATACGACGCGGCTCACAAAACACCCGCCGCACCGCAGTGCGAGTATCC
AGACGTGGGCTGTGGGTGTCGCAAACCTGGAATAGCGACAGGGAACCCCG
GACCCGCATTCCCCATCTACTACACGTTTAAGCAGTGCAATGAGACCGAA
GTTCGGGTGGTGTACAACCTGTTCTATGAGAAGGACGGAGCCGAGGTGCT
GGACCTGATTGACACGGGCCATGACTAGTAAGATCACCGCGTAAACCAAA
TCAACATCTTTGAACAGACAGACTGATGCGCTCGACCAGTGACTGGGAAC
GAGTCATCATCATCCATTCAAGAAATGCGAACAACACCTGGCAGCCCTCT
CGTGCACTCCTTTCAGCCCATAGTGGCTACCATAATCTCGCCTGGAGCAG
CATTCATAGCACTCTGACCACAGAGCAAATCAACGCCGGAGATGCTCGAA
AGCCCGATGGAGTCAAGAACAATGACCACCCAAAGGTGTATGTGTCGTGG
TCGAAGCATGCACATTTCGATACCATAGATACTACCTGGCTCGATCCGCT
GAGCCAGTCACTCGATAATGCGTTTCGCAGCAACGACTGGTGGCACTTTG
TCGACCCGAAGTACTATGTACGTATTAGCGTCCCCATTGTGATGTATAGT
AGCTAACGCCCAGCGAGATCCGATCGGATAACTCGACCGCAGCTGGAAAA
GCCTTCAACAGTACGGATTGGGGATCAGCGACGAGTAACCCGCCATATGT
GCAGGAGAGTGTATGCTCTGTGCCGTAACGATATGGTGTACAATCTAAAT
GCTAGACATATAGCGTAGACAAGCCAATCGATGAAATAGAT back to topCoding sequence (CDS) from alignment at ch4:3417820..3419260- >KJC3_005679-T2 ID=KJC3_005679-T2|Name=KJC3_005679-T2|organism=Aspergillus niger KJC3|type=CDS|length=2646bp|location=Sequence derived from alignment at ch4:3417820..3419260- (Aspergillus niger KJC3)
ATCCGATCGGATAACTCGACCGCAGCTGGAAAAGCCTTCAACAGTACGGA
TTGGGGATCAGCGACGAGTAACCCGCCATATGTGCAGGAGAGTGTATGCT
CTGTGCCGTAATGACTGGGAACGAGTCATCATCATCCATTCAAGAAATGC
GAACAACACCTGGCAGCCCTCTCGTGCACTCCTTTCAGCCCATAGTGGCT
ACCATAATCTCGCCTGGAGCAGCATTCATAGCACTCTGACCACAGAGCAA
ATCAACGCCGGAGATGCTCGAAAGCCCGATGGAGTCAAGAACAATGACCA
CCCAAAGGTGTATGTGTCGTGGTCGAAGCATGCACATTTCGATACCATAG
ATACTACCTGGCTCGATCCGCTGAGCCAGTCACTCGATAATGCGTTTCGC
AGCAACGACTGGTGGCACTTTGTCGACCCGAAGTACTATATGTGGCTAAA
AAGCAAATACATCGTGGTGGCTCTTCTTGCCGCACCGGCGGCAGCCGTCA
CACCGATATCCAACGATGAAATGACCAACTTCCTCAGCCAAGGCGCTGTA
GAGCTCGCTACCCGGTATGCGCCTCTCTGGTTCTTTGGCCAGGCAGTGGA
TCAGCCTCCTTGTTATCCGACCTGGGCTTTCGGAGGCTCACCCAACTCGT
CGGACATATACGACGCGGCTCACAAAACACCCGCCGCACCGCAGTGCGAG
TATCCAGACGTGGGCTGTGGGTGTCGCAAACCTGGAATAGCGACAGGGAA
CCCCGGACCCGCATTCCCCATCTACTACACGTTTAAGCAGTGCAATGAGA
CCGAAGTTCGGGTGGTGTACAACCTGTTCTATGAGAAGGACGGAGCCGAG
GTGCTGGACCTGATTGACACGGGCCATGACTAATCCGATCGGATAACTCG
ACCGCAGCTGGAAAAGCCTTCAACAGTACGGATTGGGGATCAGCGACGAG
TAACCCGCCATATGTGCAGGAGAGTGTATGCTCTGTGCCGTAATGACTGG
GAACGAGTCATCATCATCCATTCAAGAAATGCGAACAACACCTGGCAGCC
CTCTCGTGCACTCCTTTCAGCCCATAGTGGCTACCATAATCTCGCCTGGA
GCAGCATTCATAGCACTCTGACCACAGAGCAAATCAACGCCGGAGATGCT
CGAAAGCCCGATGGAGTCAAGAACAATGACCACCCAAAGGTGTATGTGTC
GTGGTCGAAGCATGCACATTTCGATACCATAGATACTACCTGGCTCGATC
CGCTGAGCCAGTCACTCGATAATGCGTTTCGCAGCAACGACTGGTGGCAC
TTTGTCGACCCGAAGTACTATATGTGGCTAAAAAGCAAATACATCGTGGT
GGCTCTTCTTGCCGCACCGGCGGCAGCCGTCACACCGATATCCAACGATG
AAATGACCAACTTCCTCAGCCAAGGCGCTGTAGAGCTCGCTACCCGGTAT
GCGCCTCTCTGGTTCTTTGGCCAGGCAGTGGATCAGCCTCCTTGTTATCC
GACCTGGGCTTTCGGAGGCTCACCCAACTCGTCGGACATATACGACGCGG
CTCACAAAACACCCGCCGCACCGCAGTGCGAGTATCCAGACGTGGGCTGT
GGGTGTCGCAAACCTGGAATAGCGACAGGGAACCCCGGACCCGCATTCCC
CATCTACTACACGTTTAAGCAGTGCAATGAGACCGAAGTTCGGGTGGTGT
ACAACCTGTTCTATGAGAAGGACGGAGCCGAGGTGCTGGACCTGATTGAC
ACGGGCCATGACTAATCCGATCGGATAACTCGACCGCAGCTGGAAAAGCC
TTCAACAGTACGGATTGGGGATCAGCGACGAGTAACCCGCCATATGTGCA
GGAGAGTGTATGCTCTGTGCCGTAATGACTGGGAACGAGTCATCATCATC
CATTCAAGAAATGCGAACAACACCTGGCAGCCCTCTCGTGCACTCCTTTC
AGCCCATAGTGGCTACCATAATCTCGCCTGGAGCAGCATTCATAGCACTC
TGACCACAGAGCAAATCAACGCCGGAGATGCTCGAAAGCCCGATGGAGTC
AAGAACAATGACCACCCAAAGGTGTATGTGTCGTGGTCGAAGCATGCACA
TTTCGATACCATAGATACTACCTGGCTCGATCCGCTGAGCCAGTCACTCG
ATAATGCGTTTCGCAGCAACGACTGGTGGCACTTTGTCGACCCGAAGTAC
TATATGTGGCTAAAAAGCAAATACATCGTGGTGGCTCTTCTTGCCGCACC
GGCGGCAGCCGTCACACCGATATCCAACGATGAAATGACCAACTTCCTCA
GCCAAGGCGCTGTAGAGCTCGCTACCCGGTATGCGCCTCTCTGGTTCTTT
GGCCAGGCAGTGGATCAGCCTCCTTGTTATCCGACCTGGGCTTTCGGAGG
CTCACCCAACTCGTCGGACATATACGACGCGGCTCACAAAACACCCGCCG
CACCGCAGTGCGAGTATCCAGACGTGGGCTGTGGGTGTCGCAAACCTGGA
ATAGCGACAGGGAACCCCGGACCCGCATTCCCCATCTACTACACGTTTAA
GCAGTGCAATGAGACCGAAGTTCGGGTGGTGTACAACCTGTTCTATGAGA
AGGACGGAGCCGAGGTGCTGGACCTGATTGACACGGGCCATGACTA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_005679-T2.utr3p1 | KJC3_005679-T2.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_005679-T2.utr5p1 | KJC3_005679-T2.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| Note | SECRETED:SignalP(1-19) |
| DBxref | InterPro:IPR008701 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
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| ch4 | supercontig | ch4:3417820..3419260 - |
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