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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:3432468..3433641- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_005685-T1 ID=KJC3_005685-T1|Name=KJC3_005685-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1174bp|location=Sequence derived from alignment at ch4:3432468..3433641- (Aspergillus niger KJC3)
ATGTCCCAAGTAGTAGCTACGGACATGCCGACTTTGCAAGGCGCTGCCGA
GCAAAAGCGCCCCATCCCCTATCGGAACTTGGCGGTCGGCGCGTTGATGA
ACATCTTCCAAGGTAGTGAGGATCTCTAGCTGCCAAGTACCATTCTAACT
TTAGCCAGTTACTTCTCTTGGTCAGCCGCTAGAAGTAATCAAGACCCATG
TATGTTGAACTTCCACCCGAGATTGTATCACACTGTCCTCAAATAATTTT
TGACCACTTACCCTTGTAGTTGGCAGCAAACCGGCAAGACACATTGCGGG
ATGCATTCCAGAAGACTTGGTCCCGCGGACGATTCCTTGCGTTCTATCAG
GGGCTAATACCGTGGGTACATGATTTGTTCATTCCCTGAACCAACATCCA
GACACCCTTCGTACTAATTTTCACAGGCTTGGCTGGAAGCCTCAACCAAA
GGCGCCATTCTGATAGTGACATCAAGTGAGATCGAGTACTATGCTAGAGC
AAAGTTCAATGCATCACCTACTGTCTGCGGTGTCCTGGGTGGCATTGGTG
GTGGTGTTGCTCAATCCTATCTGACAATGGGAATGACGACATGCATGAAA
ACAGTCGAAGTGACCCGCTCCAAGATGAGTGTTGGAGGTGCCAAAGTACC
GGGAGCGCTAGAAATGTTCTTTCAAATACTTCGCGAAAAGGGAATTCGAG
GAGTGAACAAAGGTGTTAACGCCGTCGCGCTACGACAGGTCACGGGTTGG
TCTTCTCGGATTGGTATTTCGCGTTTTGCCGAAGAAAGCATCCGCAAGGT
CAATGGCAAGGCGAAGGACGAGAAGCTTAAGTTTGGGGAGAAAATCCTGG
CATCTACGATCGGTGGCGCATTGAGCTGCTGGAACCAGCCATTCGAAGTA
GGTGTTCCTGAGATGGGCAAGTGAGGGCTTGTGGTTGCTGACTCTACAGG
TGCTGCGCGTGGAAATGCAATCTATGAAGAATGATCCTGCCCGGCCAACA
TCTCCGACAATTCTATCCACTTTCAAGTATATCCTTGCGACGACCGGAGT
CAAGGGTCTGTTTCGCGGTGTGGTTCCTCGCATCGGGGTTGCGGCGTGGG
CTACGATCTGTATGGTAGGATTCGGGGATACCGTTAAGGAGATTTTTAAT
CGCAGACGAACCACGGCAAATTGA back to topCoding sequence (CDS) from alignment at ch4:3432468..3433641- >KJC3_005685-T1 ID=KJC3_005685-T1|Name=KJC3_005685-T1|organism=Aspergillus niger KJC3|type=CDS|length=4725bp|location=Sequence derived from alignment at ch4:3432468..3433641- (Aspergillus niger KJC3)
GTGCTGCGCGTGGAAATGCAATCTATGAAGAATGATCCTGCCCGGCCAAC
ATCTCCGACAATTCTATCCACTTTCAAGTATATCCTTGCGACGACCGGAG
TCAAGGGTCTGTTTCGCGGTGTGGTTCCTCGCATCGGGGTTGCGGCGTGG
GCTACGATCTGTATGGTAGGATTCGGGGATACCGTTAAGGAGATTTTTAA
TCGCAGACGAACCACGGCAAATTGAGCTTGGCTGGAAGCCTCAACCAAAG
GCGCCATTCTGATAGTGACATCAAGTGAGATCGAGTACTATGCTAGAGCA
AAGTTCAATGCATCACCTACTGTCTGCGGTGTCCTGGGTGGCATTGGTGG
TGGTGTTGCTCAATCCTATCTGACAATGGGAATGACGACATGCATGAAAA
CAGTCGAAGTGACCCGCTCCAAGATGAGTGTTGGAGGTGCCAAAGTACCG
GGAGCGCTAGAAATGTTCTTTCAAATACTTCGCGAAAAGGGAATTCGAGG
AGTGAACAAAGGTGTTAACGCCGTCGCGCTACGACAGGTCACGGGTTGGT
CTTCTCGGATTGGTATTTCGCGTTTTGCCGAAGAAAGCATCCGCAAGGTC
AATGGCAAGGCGAAGGACGAGAAGCTTAAGTTTGGGGAGAAAATCCTGGC
ATCTACGATCGGTGGCGCATTGAGCTGCTGGAACCAGCCATTCGAATTGG
CAGCAAACCGGCAAGACACATTGCGGGATGCATTCCAGAAGACTTGGTCC
CGCGGACGATTCCTTGCGTTCTATCAGGGGCTAATACCGTGGTTACTTCT
CTTGGTCAGCCGCTAGAAGTAATCAAGACCCATATGTCCCAAGTAGTAGC
TACGGACATGCCGACTTTGCAAGGCGCTGCCGAGCAAAAGCGCCCCATCC
CCTATCGGAACTTGGCGGTCGGCGCGTTGATGAACATCTTCCAAGGTGCT
GCGCGTGGAAATGCAATCTATGAAGAATGATCCTGCCCGGCCAACATCTC
CGACAATTCTATCCACTTTCAAGTATATCCTTGCGACGACCGGAGTCAAG
GGTCTGTTTCGCGGTGTGGTTCCTCGCATCGGGGTTGCGGCGTGGGCTAC
GATCTGTATGGTAGGATTCGGGGATACCGTTAAGGAGATTTTTAATCGCA
GACGAACCACGGCAAATTGAGCTTGGCTGGAAGCCTCAACCAAAGGCGCC
ATTCTGATAGTGACATCAAGTGAGATCGAGTACTATGCTAGAGCAAAGTT
CAATGCATCACCTACTGTCTGCGGTGTCCTGGGTGGCATTGGTGGTGGTG
TTGCTCAATCCTATCTGACAATGGGAATGACGACATGCATGAAAACAGTC
GAAGTGACCCGCTCCAAGATGAGTGTTGGAGGTGCCAAAGTACCGGGAGC
GCTAGAAATGTTCTTTCAAATACTTCGCGAAAAGGGAATTCGAGGAGTGA
ACAAAGGTGTTAACGCCGTCGCGCTACGACAGGTCACGGGTTGGTCTTCT
CGGATTGGTATTTCGCGTTTTGCCGAAGAAAGCATCCGCAAGGTCAATGG
CAAGGCGAAGGACGAGAAGCTTAAGTTTGGGGAGAAAATCCTGGCATCTA
CGATCGGTGGCGCATTGAGCTGCTGGAACCAGCCATTCGAATTGGCAGCA
AACCGGCAAGACACATTGCGGGATGCATTCCAGAAGACTTGGTCCCGCGG
ACGATTCCTTGCGTTCTATCAGGGGCTAATACCGTGGTTACTTCTCTTGG
TCAGCCGCTAGAAGTAATCAAGACCCATATGTCCCAAGTAGTAGCTACGG
ACATGCCGACTTTGCAAGGCGCTGCCGAGCAAAAGCGCCCCATCCCCTAT
CGGAACTTGGCGGTCGGCGCGTTGATGAACATCTTCCAAGGTGCTGCGCG
TGGAAATGCAATCTATGAAGAATGATCCTGCCCGGCCAACATCTCCGACA
ATTCTATCCACTTTCAAGTATATCCTTGCGACGACCGGAGTCAAGGGTCT
GTTTCGCGGTGTGGTTCCTCGCATCGGGGTTGCGGCGTGGGCTACGATCT
GTATGGTAGGATTCGGGGATACCGTTAAGGAGATTTTTAATCGCAGACGA
ACCACGGCAAATTGAGCTTGGCTGGAAGCCTCAACCAAAGGCGCCATTCT
GATAGTGACATCAAGTGAGATCGAGTACTATGCTAGAGCAAAGTTCAATG
CATCACCTACTGTCTGCGGTGTCCTGGGTGGCATTGGTGGTGGTGTTGCT
CAATCCTATCTGACAATGGGAATGACGACATGCATGAAAACAGTCGAAGT
GACCCGCTCCAAGATGAGTGTTGGAGGTGCCAAAGTACCGGGAGCGCTAG
AAATGTTCTTTCAAATACTTCGCGAAAAGGGAATTCGAGGAGTGAACAAA
GGTGTTAACGCCGTCGCGCTACGACAGGTCACGGGTTGGTCTTCTCGGAT
TGGTATTTCGCGTTTTGCCGAAGAAAGCATCCGCAAGGTCAATGGCAAGG
CGAAGGACGAGAAGCTTAAGTTTGGGGAGAAAATCCTGGCATCTACGATC
GGTGGCGCATTGAGCTGCTGGAACCAGCCATTCGAATTGGCAGCAAACCG
GCAAGACACATTGCGGGATGCATTCCAGAAGACTTGGTCCCGCGGACGAT
TCCTTGCGTTCTATCAGGGGCTAATACCGTGGTTACTTCTCTTGGTCAGC
CGCTAGAAGTAATCAAGACCCATATGTCCCAAGTAGTAGCTACGGACATG
CCGACTTTGCAAGGCGCTGCCGAGCAAAAGCGCCCCATCCCCTATCGGAA
CTTGGCGGTCGGCGCGTTGATGAACATCTTCCAAGGTGCTGCGCGTGGAA
ATGCAATCTATGAAGAATGATCCTGCCCGGCCAACATCTCCGACAATTCT
ATCCACTTTCAAGTATATCCTTGCGACGACCGGAGTCAAGGGTCTGTTTC
GCGGTGTGGTTCCTCGCATCGGGGTTGCGGCGTGGGCTACGATCTGTATG
GTAGGATTCGGGGATACCGTTAAGGAGATTTTTAATCGCAGACGAACCAC
GGCAAATTGAGCTTGGCTGGAAGCCTCAACCAAAGGCGCCATTCTGATAG
TGACATCAAGTGAGATCGAGTACTATGCTAGAGCAAAGTTCAATGCATCA
CCTACTGTCTGCGGTGTCCTGGGTGGCATTGGTGGTGGTGTTGCTCAATC
CTATCTGACAATGGGAATGACGACATGCATGAAAACAGTCGAAGTGACCC
GCTCCAAGATGAGTGTTGGAGGTGCCAAAGTACCGGGAGCGCTAGAAATG
TTCTTTCAAATACTTCGCGAAAAGGGAATTCGAGGAGTGAACAAAGGTGT
TAACGCCGTCGCGCTACGACAGGTCACGGGTTGGTCTTCTCGGATTGGTA
TTTCGCGTTTTGCCGAAGAAAGCATCCGCAAGGTCAATGGCAAGGCGAAG
GACGAGAAGCTTAAGTTTGGGGAGAAAATCCTGGCATCTACGATCGGTGG
CGCATTGAGCTGCTGGAACCAGCCATTCGAATTGGCAGCAAACCGGCAAG
ACACATTGCGGGATGCATTCCAGAAGACTTGGTCCCGCGGACGATTCCTT
GCGTTCTATCAGGGGCTAATACCGTGGTTACTTCTCTTGGTCAGCCGCTA
GAAGTAATCAAGACCCATATGTCCCAAGTAGTAGCTACGGACATGCCGAC
TTTGCAAGGCGCTGCCGAGCAAAAGCGCCCCATCCCCTATCGGAACTTGG
CGGTCGGCGCGTTGATGAACATCTTCCAAGGTGCTGCGCGTGGAAATGCA
ATCTATGAAGAATGATCCTGCCCGGCCAACATCTCCGACAATTCTATCCA
CTTTCAAGTATATCCTTGCGACGACCGGAGTCAAGGGTCTGTTTCGCGGT
GTGGTTCCTCGCATCGGGGTTGCGGCGTGGGCTACGATCTGTATGGTAGG
ATTCGGGGATACCGTTAAGGAGATTTTTAATCGCAGACGAACCACGGCAA
ATTGAGCTTGGCTGGAAGCCTCAACCAAAGGCGCCATTCTGATAGTGACA
TCAAGTGAGATCGAGTACTATGCTAGAGCAAAGTTCAATGCATCACCTAC
TGTCTGCGGTGTCCTGGGTGGCATTGGTGGTGGTGTTGCTCAATCCTATC
TGACAATGGGAATGACGACATGCATGAAAACAGTCGAAGTGACCCGCTCC
AAGATGAGTGTTGGAGGTGCCAAAGTACCGGGAGCGCTAGAAATGTTCTT
TCAAATACTTCGCGAAAAGGGAATTCGAGGAGTGAACAAAGGTGTTAACG
CCGTCGCGCTACGACAGGTCACGGGTTGGTCTTCTCGGATTGGTATTTCG
CGTTTTGCCGAAGAAAGCATCCGCAAGGTCAATGGCAAGGCGAAGGACGA
GAAGCTTAAGTTTGGGGAGAAAATCCTGGCATCTACGATCGGTGGCGCAT
TGAGCTGCTGGAACCAGCCATTCGAATTGGCAGCAAACCGGCAAGACACA
TTGCGGGATGCATTCCAGAAGACTTGGTCCCGCGGACGATTCCTTGCGTT
CTATCAGGGGCTAATACCGTGGTTACTTCTCTTGGTCAGCCGCTAGAAGT
AATCAAGACCCATATGTCCCAAGTAGTAGCTACGGACATGCCGACTTTGC
AAGGCGCTGCCGAGCAAAAGCGCCCCATCCCCTATCGGAACTTGGCGGTC
GGCGCGTTGATGAACATCTTCCAAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR018108 |
| DBxref | InterPro:IPR023395 |
| DBxref | PFAM:PF00153 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch4 | supercontig | ch4:3432468..3433641 - |
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