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KJC3_005718-T1, KJC3_005718-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_005718-T1
Unique NameKJC3_005718-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch4:3515658..3516788-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_005718-T1 ID=KJC3_005718-T1|Name=KJC3_005718-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1131bp|location=Sequence derived from alignment at ch4:3515658..3516788- (Aspergillus niger KJC3)
CCGGGGATGCGATAATCGGCCGTCTGTCTACCTACACCACTACCACCGTG
TCGCGGAGCTCCTCCAACCACTCCAGCCTCCATTTCGATCCTTCTCGAGC
TCCACCACCCTACCTCACACAAAGAACACATCATACACAATGAACCCCGC
TAGCATGACCACGCCGATGGGCGGCCTCGGCGGCGCCCCCGGCGCAGCAG
GACCCAACATGCAGGGCATGAGCGAGCAAGAACAAGCCATGGTGAAGATG
GTACATACATACCCATCCCCTATACACTCTTCCTCTCACACCCAAAGAAT
CAAGCTAACACACCGATCAAAACAATAGATGTACTCCGCCATGGAATCCT
GCCCCATGAAGACCGTCATGGCCGGAACAATGGGTTTCGGTCTGGGTGGT
GTCTTCGGTTTGTTTATGGCTAGCGTATGCCTCCCCCCCCTCTTCCCAAA
TACCCTCCTTAAACTCAATACTGATATCCGAGTCTTGGTATATATATAGA
TGTCCTACGACTCCACCTTCACCCCCCAAGGCAAAGCGATCGCCGACCTC
CCCTGGAAAGAGCAAGTACGTCGCGGCTTCAAAGACATGGGCCAGCGGTC
GTGGTCCAGCGCCAAGAACTTCGGTATCGTGGGTGCGCTGTACTCTGGCA
CGGAGTGCTGTATTGAGGGACTGAGGGCCAAGAATGATCTGACGAATTCG
GTGGCCGCGGGTTGCATTACTGGTGGTATTTTGGGTGCGAAGGCCGGCCC
CCAGGCTGCTGCTGCCGGGTGTGCGGGCTTTGCGGCGTTTAGTGCGGCTA
TTGATGCTTATATGAGGATGCCGGAGAAGGATGATTAGATTTATTGAAGA
TGAGGGGAGAGGGGAAGGGAGGGAGGGGGTGTAATGTGAGAGGAGGTGAT
GGGGGGTATGGGTTTGTTTCATGGGTGGCGTTTGGGATGGGTGCATTTTA
TGGCGTTTTTATTCCTTTTTTCCTGGGTGATGGTGATTGATCGGTTGATT
GAGATGTGGGATTGAGGTATTGATAGACTTGATTGAGGATCTGGAGGGTG
GTCTTGACTCGACTCATTGTATATTACTACTACTGTGTATAGATAAAATA
GATCTTCATTGCAGCAGTGTTATTACTATTA
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Coding sequence (CDS) from alignment at ch4:3515658..3516788-

>KJC3_005718-T1 ID=KJC3_005718-T1|Name=KJC3_005718-T1|organism=Aspergillus niger KJC3|type=CDS|length=1638bp|location=Sequence derived from alignment at ch4:3515658..3516788- (Aspergillus niger KJC3)
ATGTCCTACGACTCCACCTTCACCCCCCAAGGCAAAGCGATCGCCGACCT
CCCCTGGAAAGAGCAAGTACGTCGCGGCTTCAAAGACATGGGCCAGCGGT
CGTGGTCCAGCGCCAAGAACTTCGGTATCGTGGGTGCGCTGTACTCTGGC
ACGGAGTGCTGTATTGAGGGACTGAGGGCCAAGAATGATCTGACGAATTC
GGTGGCCGCGGGTTGCATTACTGGTGGTATTTTGGGTGCGAAGGCCGGCC
CCCAGGCTGCTGCTGCCGGGTGTGCGGGCTTTGCGGCGTTTAGTGCGGCT
ATTGATGCTTATATGAGGATGCCGGAGAAGGATGATTAGATGTACTCCGC
CATGGAATCCTGCCCCATGAAGACCGTCATGGCCGGAACAATGGGTTTCG
GTCTGGGTGGTGTCTTCGGTTTGTTTATGGCTAGCATGAACCCCGCTAGC
ATGACCACGCCGATGGGCGGCCTCGGCGGCGCCCCCGGCGCAGCAGGACC
CAACATGCAGGGCATGAGCGAGCAAGAACAAGCCATGGTGAAGATGATGT
CCTACGACTCCACCTTCACCCCCCAAGGCAAAGCGATCGCCGACCTCCCC
TGGAAAGAGCAAGTACGTCGCGGCTTCAAAGACATGGGCCAGCGGTCGTG
GTCCAGCGCCAAGAACTTCGGTATCGTGGGTGCGCTGTACTCTGGCACGG
AGTGCTGTATTGAGGGACTGAGGGCCAAGAATGATCTGACGAATTCGGTG
GCCGCGGGTTGCATTACTGGTGGTATTTTGGGTGCGAAGGCCGGCCCCCA
GGCTGCTGCTGCCGGGTGTGCGGGCTTTGCGGCGTTTAGTGCGGCTATTG
ATGCTTATATGAGGATGCCGGAGAAGGATGATTAGATGTACTCCGCCATG
GAATCCTGCCCCATGAAGACCGTCATGGCCGGAACAATGGGTTTCGGTCT
GGGTGGTGTCTTCGGTTTGTTTATGGCTAGCATGAACCCCGCTAGCATGA
CCACGCCGATGGGCGGCCTCGGCGGCGCCCCCGGCGCAGCAGGACCCAAC
ATGCAGGGCATGAGCGAGCAAGAACAAGCCATGGTGAAGATGATGTCCTA
CGACTCCACCTTCACCCCCCAAGGCAAAGCGATCGCCGACCTCCCCTGGA
AAGAGCAAGTACGTCGCGGCTTCAAAGACATGGGCCAGCGGTCGTGGTCC
AGCGCCAAGAACTTCGGTATCGTGGGTGCGCTGTACTCTGGCACGGAGTG
CTGTATTGAGGGACTGAGGGCCAAGAATGATCTGACGAATTCGGTGGCCG
CGGGTTGCATTACTGGTGGTATTTTGGGTGCGAAGGCCGGCCCCCAGGCT
GCTGCTGCCGGGTGTGCGGGCTTTGCGGCGTTTAGTGCGGCTATTGATGC
TTATATGAGGATGCCGGAGAAGGATGATTAGATGTACTCCGCCATGGAAT
CCTGCCCCATGAAGACCGTCATGGCCGGAACAATGGGTTTCGGTCTGGGT
GGTGTCTTCGGTTTGTTTATGGCTAGCATGAACCCCGCTAGCATGACCAC
GCCGATGGGCGGCCTCGGCGGCGCCCCCGGCGCAGCAGGACCCAACATGC
AGGGCATGAGCGAGCAAGAACAAGCCATGGTGAAGATG
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
TIM22KJC3_005718Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005718-T1KJC3_005718-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005718-T1.cdsKJC3_005718-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005718-T1.utr3p1KJC3_005718-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005718-T1.exon3KJC3_005718-T1.exon3Aspergillus niger KJC3exon
KJC3_005718-T1.exon2KJC3_005718-T1.exon2Aspergillus niger KJC3exon
KJC3_005718-T1.exon1KJC3_005718-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005718-T1.utr5p1KJC3_005718-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
DBxrefPFAM:PF02466
ProductMitochondrial import inner membrane translocase subunit tim22
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch4supercontigch4:3515658..3516788 -
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