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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:3524060..3525973+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_005722-T1 ID=KJC3_005722-T1|Name=KJC3_005722-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1914bp|location=Sequence derived from alignment at ch4:3524060..3525973+ (Aspergillus niger KJC3)
CTCGGAGGGAGCGATGCTTGGGGGTATAACCTTTTCAGTAGTTGACACTT
AACCCCTCTCTTCTCCTCCCGTTTTCACTACTTCACTCAACCAACATTCT
ATCGTCGTATCGACCAATCCACCATGGGAGTGTTGTTTAACTCCCACACA
AACCAGCTACTCCTGCTGGTAGCGGTCCTGGCAGCACTCACATTCGTCAC
CTCCAGGATCCGTCGTTATTTTATCCGCCGCGACTTCGCACGCCGCCATG
GCTGCCAGGAACCGCCCAGTGTCAACAAGGACCCTTTCCTGGCACTTGAT
CAAGTCTGGGCCTCCGTTCGCTATTTCCGAAAGCACATTTCCCTGGAAAA
AAACACCGAGCGTTATCATCTCTATGGGGATACTTACGCTTGGAAACTAC
TGCTGGGGCGCTACAGAGTCTTCACTATGGAGCCGGAGAATGTAAAATCA
GTCCTATCGACGAGTTTTAAGGACTGGGGTCTGGGTCACCGTCTCCCACA
TTTCGAACCGCTTCTGGGTAAAGGTATCTTCGACACAGATGGTGAACATT
GGGCCGCGTCCCGTGCCCTCATCCGGCCCAGCTTCACCCGCGACCAGGTT
GCGGATCTGGCAATGTTTGAAGAGTTGATCCCTGATCTCTTTGCACAGAT
TCCTCGTGATGGAGTGACGGTCGTGGATCTACAGGATCTCTTTTTCCGCT
ACACCATTGATTCGGCCACCGCATTCCTCTTCGGTCAGTCGGTCGGCAGC
CTGCAGATGGTCCAGTCCGAGCTTGGCTTTGCTCAGGCCTTCAACTATGC
CCAGGAAGCTATAACATTGCGTTTCGTTCTGGGTCCGCTAGGTAGAATTT
TTCCTCACAAGAAGGCCGATAAATGTTATCGTCTATGCCGGGACTTCGCT
GAGCGATTTGTCGATGAGGCAGTCCAAGCGGCACAGTCCAAGGAAGCAGA
CCAAGAGACTAAACATCAGAAATATATCTTTTCTCATGAACTGGCACGAC
GCACCTCTGATAAACATCGCATTTTGGACGAGCTCATGAACGTTCTGCTC
GCCGGCCGCGACACCACGGCCGGCCTTTTGAGCAACATGTTTTTCGTGTT
GGCGAAGCGCCCAGAGATCTGGGACAAACTGCGCCAGGAAGTAGCTACCT
TGGAGGGCCGATTGCCCTCGTATGAGGAGCTTCGGAACCTCAAGTACCTC
CGATGCTGTATGAATGAATGTGAGTCGACTGTGCTACAACCCTGGCCCAT
ATCTCATGCCTCTGACCAATCCACTAGCTTTACGGTTGCATCCAGTCGTC
CCAATGAACGGGCGCATCGCACTGAGAGATACGGTGCTGCCGAGGGGAGG
AGGTAAGGATGGTCGCTCTCCGGTCTTCATCCCCGAAGGGTCTACAATTG
AGTACAATGTATATGCGATGCATCGGCGAAAGGATATCTTTGGGCCCGAT
GCAGATGAATTCCGCCCAGAGCGCTGGGAGAACGGGCAATTGCAGCCTCG
TTGGGAGTATCTTCCCTTCAACGGGGGCCCCCGCATCTGTCTCGGTCAGC
AATATGCGCTGACTGAAGCCGGATATGTCACTGTCCGCTTGGCCCAAGAA
TTCAGGACCTTACAGAGCCAGGATCCAGGACCGTGGGAGGAGGCTTTAAC
CTTGACTCTGTGCTCCCGGAATGGCACTAAGGTGTCTGTTACGCCGGCTT
GAATGACATAAAAGTTTGCCTATTGTAATGGTAGTTGCTTAGCTCACAGT
CAAGGGCCATACGCTAATTGCCAGACTATAATTTCGTTATATTAGCCTCC
ACTTTTGCTATTATATGAAGCGTCCTATGTATATTGAAGGGCTTGGAAGG
GAATGTGGCGAAGAAGCTTTCACCAAGTAACAACTTACCTCTGCCGTTCG
CACGGGGTCCAGAG back to topCoding sequence (CDS) from alignment at ch4:3524060..3525973+ >KJC3_005722-T1 ID=KJC3_005722-T1|Name=KJC3_005722-T1|organism=Aspergillus niger KJC3|type=CDS|length=1233bp|location=Sequence derived from alignment at ch4:3524060..3525973+ (Aspergillus niger KJC3)
ATGGGAGTGTTGTTTAACTCCCACACAAACCAGCTACTCCTGCTGGTAGC
GGTCCTGGCAGCACTCACATTCGTCACCTCCAGGATCCGTCGTTATTTTA
TCCGCCGCGACTTCGCACGCCGCCATGGCTGCCAGGAACCGCCCAGTGTC
AACAAGGACCCTTTCCTGGCACTTGATCAAGTCTGGGCCTCCGTTCGCTA
TTTCCGAAAGCACATTTCCCTGGAAAAAAACACCGAGCGTTATCATCTCT
ATGGGGATACTTACGCTTGGAAACTACTGCTGGGGCGCTACAGAGTCTTC
ACTATGGAGCCGGAGAATGTAAAATCAGTCCTATCGACGAGTTTTAAGGA
CTGGGGTCTGGGTCACCGTCTCCCACATTTCGAACCGCTTCTGGGTAAAG
GTATCTTCGACACAGATGGTGAACATTGGGCCGCGTCCCGTGCCCTCATC
CGGCCCAGCTTCACCCGCGACCAGGTTGCGGATCTGGCAATGTTTGAAGA
GTTGATCCCTGATCTCTTTGCACAGATTCCTCGTGATGGAGTGACGGTCG
TGGATCTACAGGATCTCTTTTTCCGCTACACCATTGATTCGGCCACCGCA
TTCCTCTTCGGTCAGTCGGTCGGCAGCCTGCAGATGGTCCAGTCCGAGCT
TGGCTTTGCTCAGGCCTTCAACTATGCCCAGGAAGCTATAACATTGCGTT
TCGTTCTGGGTCCGCTAGGTAGAATTTTTCCTCACAAGAAGGCCGATAAA
TGTTATCGTCTATGCCGGGACTTCGCTGAGCGATTTGTCGATGAGGCAGT
CCAAGCGGCACAGTCCAAGGAAGCAGACCAAGAGACTAAACATCAGAAAT
ATATCTTTTCTCATGAACTGGCACGACGCACCTCTGATAAACATCGCATT
TTGGACGAGCTCATGAACGTTCTGCTCGCCGGCCGCGACACCACGGCCGG
CCTTTTGAGCAACATGTTTTTCGTGTTGGCGAAGCGCCCAGAGATCTGGG
ACAAACTGCGCCAGGAAGTAGCTACCTTGGAGGGCCGATTGCCCTCGTAT
GAGGAGCTTCGGAACCTCAAGTACCTCCGATGCTGTATGAATGAATGTGA
GTCGACTGTGCTACAACCCTGGCCCATATCTCATGCCTCTGACCAATCCA
CTAGCTTTACGGTTGCATCCAGTCGTCCCAATGAACGGGCGCATCGCACT
GAGAGATACGGTGCTGCCGAGGGGAGGAGGTAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0055114 | oxidation-reduction process |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0016705 | oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen |
| GO:0016712 | oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen |
| GO:0020037 | heme binding |
| GO:0004497 | monooxygenase activity |
| GO:0005506 | iron ion binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_005722-T1.utr5p1 | KJC3_005722-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_005722-T1.utr3p1 | KJC3_005722-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR001128 |
| DBxref | InterPro:IPR036396 |
| DBxref | InterPro:IPR002974 |
| DBxref | InterPro:IPR002402 |
| DBxref | PFAM:PF00067 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch4 | supercontig | ch4:3524060..3525973 + |
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